Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0880
(648 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 27 0.21
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.83
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 24 1.1
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 1.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 1.9
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 23 1.9
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 2.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 3.4
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 4.4
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 7.8
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 21 7.8
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 26.6 bits (56), Expect = 0.21
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 480 TSADYRQYHENYNYNMQQNQSGTRNGNYDSPKP-PVPAKTY 599
+S + H N NYN N+ N NY P PVP Y
Sbjct: 305 SSLSNKTIHNNNNYNNYNNKKLYYNINYIEQIPVPVPVPIY 345
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.6 bits (51), Expect = 0.83
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +3
Query: 480 TSADYRQYHENYNYNMQQNQSGTRNGNYDS 569
+S + H N NY N + N NY++
Sbjct: 316 SSLSNKTIHNNNNYKYNYNNNNYNNNNYNN 345
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 1.1
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 330 EREVILSSGEKN-SKVPILQEARKRGRLGAVAPDTPPKTLSAWTHSENQAGTSADYRQYH 506
ERE L E+ K + R R R PK +S+ +++ N + +Y+ H
Sbjct: 277 EREQKLYKNEREYRKYGETSKERSRNRTER-EKSKEPKIISSLSNNYNYNNYNNNYKPLH 335
Query: 507 ENYNY 521
N NY
Sbjct: 336 YNINY 340
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 492 YRQYHENYNYNMQQNQSGTRNGNY 563
Y Y+ NYN N N + N NY
Sbjct: 91 YSNYN-NYNNNYNNNYNNNYNNNY 113
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3
Query: 510 NYNYNMQQNQSGTRNGNYDS 569
NY Y+ N + N NY++
Sbjct: 88 NYKYSNYNNYNNNYNNNYNN 107
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 492 YRQYHENYNYNMQQNQSGTRNGNY 563
Y Y+ NYN N N + N NY
Sbjct: 91 YSNYN-NYNNNYNNNYNNNYNNNY 113
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3
Query: 510 NYNYNMQQNQSGTRNGNYDS 569
NY Y+ N + N NY++
Sbjct: 88 NYKYSNYNNYNNNYNNNYNN 107
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 355 EKRIPKCQYFKRLENAADSAPWLPTPHQKHSQP 453
EK+IPK +++L N P+ T ++K P
Sbjct: 210 EKKIPKSSGWRKLRNIVHWTPFFQT-YKKQRYP 241
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 2.5
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +3
Query: 510 NYNYNMQQNQSGTRNGNYDSPKPPVPAKTYGTKID 614
NY Y+ N + N NY++ + K Y I+
Sbjct: 321 NYKYSNYNNYNNYNNNNYNNYNKKLYYKNYIINIE 355
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Frame = +3
Query: 492 YRQYHE-NYNYNMQQNQSGTRNGNY 563
Y Y+ N NYN N + N NY
Sbjct: 324 YSNYNNYNNNYNNYNNYNNNYNNNY 348
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/23 (39%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = +3
Query: 504 HENYN-YNMQQNQSGTRNGNYDS 569
+ NYN YN N N NY++
Sbjct: 324 YSNYNNYNNNYNNYNNYNNNYNN 346
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 391 LENAADSAPWLPTPHQKHSQP 453
L+N S PTP QKH+ P
Sbjct: 208 LDNIKKSGYKKPTPVQKHALP 228
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +3
Query: 489 DYRQYHENYNYNMQQNQSGTRNGNYDSPKPPVPAKTY 599
+Y + YNYN + +N + + PVP Y
Sbjct: 323 NYNNNNYKYNYNNYNKKLYYKNYIINIEQIPVPVPVY 359
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 214 HSTVSHRIGCPQHRRRRCLESQRLPDLPP 300
++T R+G HR + +R P PP
Sbjct: 194 NNTELSRVGTKYHRSGGLMNVERFPYQPP 222
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,396
Number of Sequences: 438
Number of extensions: 4771
Number of successful extensions: 34
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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