Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0879
         (663 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.        25   2.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   2.1  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   2.1  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   4.9  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   4.9  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    24   4.9  

>EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.
          Length = 421

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +1

Query: 226 DLGLMIDSFA-TYGFKLNNGITVLGPMAIFPRTVLSWQVADSDDVTEESLK 375
           ++ ++I  F   YG  LN  I  LG   +F +      +A +DD  + ++K
Sbjct: 295 EVTVLIPKFRFNYGTLLNEAIQRLGIRDVFTKNAALPLLASADDAKQSTIK 345


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 550 SVAAALIPPFKVNMNEDDM 606
           S+++ L+ P  +NMN DDM
Sbjct: 429 SLSSELMQPIPINMNADDM 447


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 550 SVAAALIPPFKVNMNEDDM 606
           S+++ L+ P  +NMN DDM
Sbjct: 429 SLSSELMQPIPINMNADDM 447


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 550 SVAAALIPPFKVNMNEDDM 606
           S+++ L+ P  +NMN DDM
Sbjct: 389 SLSSELMQPIPINMNADDM 407


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 555 HGSALCVQEVECGTC 511
           H +  C++E+ CG C
Sbjct: 582 HKAGTCMEEIRCGKC 596


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 507 TRMFHIQLPERRGQIRGCCPDTTVQSQ 587
           TR+F+ QL +   +I+  CP  ++  Q
Sbjct: 263 TRLFYYQLTDLYKKIKKACPPLSLHGQ 289


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 498 GNRTRMFHIQLPERRGQIRGCCPDTT 575
           G+ T + H + PE   +IRG   +TT
Sbjct: 133 GDLTNLVHAEHPELLKEIRGLSEETT 158


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,186
Number of Sequences: 2352
Number of extensions: 12654
Number of successful extensions: 26
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)