Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0876
         (579 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-422|AAN13235.1|  741|Drosophila melanogaster CG15593-PB...    30   2.6  
BT021950-1|AAX51655.1|  346|Drosophila melanogaster GM02004p pro...    29   6.0  
AY124548-1|AAM94031.1|  499|Drosophila melanogaster tyrosylprote...    29   6.0  
AY119073-1|AAM50933.1|  499|Drosophila melanogaster LP09162p pro...    29   6.0  
AE014298-1921|AAF48286.2|  499|Drosophila melanogaster CG32632-P...    29   6.0  

>AE014297-422|AAN13235.1|  741|Drosophila melanogaster CG15593-PB,
           isoform B protein.
          Length = 741

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/63 (28%), Positives = 33/63 (52%)
 Frame = +2

Query: 377 FVGKKSEVRLSRHQKHKSDHSVFISPLYVLWYLLFFWKFRLVFFRSM*YSLKECLSLNRI 556
           F G K+E  + +  + +S HS  +SPL ++  L+ F +     F +M    K+C+  ++ 
Sbjct: 17  FGGYKTEGSVGQRAQLRSKHSTIMSPLDIVLLLVSFHQVIGSDFSAMSLEFKQCVRGSQK 76

Query: 557 PCI 565
           P I
Sbjct: 77  PKI 79


>BT021950-1|AAX51655.1|  346|Drosophila melanogaster GM02004p
           protein.
          Length = 346

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = +1

Query: 52  IKLPYRFTLLYLTISMYV*NCTLFIQKFAY*KSRCHYKIEVSEPLRTQL 198
           ++LPYR   + L +   +   T+F+ KF   +  C +K++ +  L +Q+
Sbjct: 1   MRLPYRNKKVTLWVLFGIIVITMFLFKFTELRPTCLFKVDAANELSSQM 49


>AY124548-1|AAM94031.1|  499|Drosophila melanogaster tyrosylprotein
           sulfotransferase protein.
          Length = 499

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = +1

Query: 52  IKLPYRFTLLYLTISMYV*NCTLFIQKFAY*KSRCHYKIEVSEPLRTQL 198
           ++LPYR   + L +   +   T+F+ KF   +  C +K++ +  L +Q+
Sbjct: 1   MRLPYRNKKVTLWVLFGIIVITMFLFKFTELRPTCLFKVDAANELSSQM 49


>AY119073-1|AAM50933.1|  499|Drosophila melanogaster LP09162p
           protein.
          Length = 499

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = +1

Query: 52  IKLPYRFTLLYLTISMYV*NCTLFIQKFAY*KSRCHYKIEVSEPLRTQL 198
           ++LPYR   + L +   +   T+F+ KF   +  C +K++ +  L +Q+
Sbjct: 1   MRLPYRNKKVTLWVLFGIIVITMFLFKFTELRPTCLFKVDAANELSSQM 49


>AE014298-1921|AAF48286.2|  499|Drosophila melanogaster CG32632-PB
           protein.
          Length = 499

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = +1

Query: 52  IKLPYRFTLLYLTISMYV*NCTLFIQKFAY*KSRCHYKIEVSEPLRTQL 198
           ++LPYR   + L +   +   T+F+ KF   +  C +K++ +  L +Q+
Sbjct: 1   MRLPYRNKKVTLWVLFGIIVITMFLFKFTELRPTCLFKVDAANELSSQM 49


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,739,508
Number of Sequences: 53049
Number of extensions: 398265
Number of successful extensions: 593
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)