Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0872
(723 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein. 27 0.78
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 26 1.4
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 24 5.5
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 23 7.2
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 23 7.2
AY462096-1|AAS21248.1| 603|Anopheles gambiae transposase protein. 23 7.2
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 7.2
AF513636-1|AAM53608.1| 222|Anopheles gambiae glutathione S-tran... 23 7.2
AY390606-1|AAR27303.1| 241|Anopheles gambiae SP22D protein. 23 9.6
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 23 9.6
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 23 9.6
>AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein.
Length = 525
Score = 26.6 bits (56), Expect = 0.78
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +2
Query: 197 RNATNGAQPGAAYTPPPNLAPYNKNEVPLTSLVPSSGGMP 316
R+ NG P T PP++AP P T+ +G P
Sbjct: 396 RSLVNGGTPSTT-TMPPSVAPTTSTVAPGTTTTTPTGANP 434
>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
cell-adhesion protein protein.
Length = 1881
Score = 25.8 bits (54), Expect = 1.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 612 KRFRISLNGSAFSFSPINVVEGSLNTLSMSASSKLKYFLM 493
KR+ + L +AF F VVE + L S +S ++Y L+
Sbjct: 628 KRYEVRLKENAFEFESPIVVEARDSDLEGSPNSAVEYRLI 667
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 23.8 bits (49), Expect = 5.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 20 SWLLNKPQTAAVSVNANRL 76
+W+ ++ +T A+ VN NRL
Sbjct: 45 NWVTDESKTVAIVVNGNRL 63
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 23.4 bits (48), Expect = 7.2
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 164 NSVHASWDAFFRNATNGAQPGAAYTPPPNLAP 259
N + A F N N AQP A PPP + P
Sbjct: 563 NPAQLRFPAGFPNLPN-AQPPPAPPPPPPMGP 593
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 23.4 bits (48), Expect = 7.2
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = +1
Query: 430 ARHHDGHASGTGHACTKFRA--HHEEIFQ 510
+ HH G A+ TGH + A HH + Q
Sbjct: 710 SHHHGGAAAATGHHHHQHHAAPHHHSLQQ 738
>AY462096-1|AAS21248.1| 603|Anopheles gambiae transposase protein.
Length = 603
Score = 23.4 bits (48), Expect = 7.2
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +1
Query: 61 KCQ*AEELHRGRTLPQWLQFSLRRDHVQ 144
+C E H GR + W+Q +L + ++
Sbjct: 211 ECSEFENPHSGRNIANWIQGTLNKFDIE 238
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 23.4 bits (48), Expect = 7.2
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +1
Query: 76 EELHRGRTLPQWLQFSLRRDHVQCMARRPKLRTRVLGCIFP 198
+E H+ + + R H + RP RTR+LG P
Sbjct: 153 DECHKNYGRQELWEICARLTHQAPSSDRPAQRTRILGLAGP 193
>AF513636-1|AAM53608.1| 222|Anopheles gambiae glutathione
S-transferase D6 protein.
Length = 222
Score = 23.4 bits (48), Expect = 7.2
Identities = 6/11 (54%), Positives = 11/11 (100%)
Frame = -3
Query: 301 RWHERCERDLI 269
RW+E+C+R+L+
Sbjct: 188 RWYEQCKRELV 198
>AY390606-1|AAR27303.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 23.0 bits (47), Expect = 9.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 84 PPRQNPSSMAPVQLTSRPCTMHG 152
P RQ+PS + P+Q + HG
Sbjct: 10 PQRQHPSLVGPLQQQQQQQQQHG 32
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 23.0 bits (47), Expect = 9.6
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +2
Query: 218 QPGAAYTPPPNLAPYNKNEVPLTSLVPSSG 307
+PG P P+ P E+P+ L P G
Sbjct: 635 EPGLLGPPGPSGEPGRDAEIPMDQLKPIKG 664
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 23.0 bits (47), Expect = 9.6
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +1
Query: 109 WLQFSLRRDHVQCMA-RRPKLRTRVLGCIFPQCDKRSSARRRIHATAQSR 255
W Q R H+Q MA RR +L + G I D R +H R
Sbjct: 968 WGQLEFRTAHLQSMAERRNRLIIIIYGDIGNIYDLEPELRAYLHTNTYVR 1017
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 841,721
Number of Sequences: 2352
Number of extensions: 18535
Number of successful extensions: 49
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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