Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0870
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.2  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   7.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.3  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   9.6  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = -1

Query: 427 INLISSSSKFWTKLSPIPLAP--PVI 356
           ++ +    +FW  L+PIP  P  P+I
Sbjct: 17  VSSLRKKGRFWECLAPIPQPPAYPII 42


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = -1

Query: 427 INLISSSSKFWTKLSPIPLAP--PVI 356
           ++ +    +FW  L+PIP  P  P+I
Sbjct: 17  VSSLRKKGRFWECLAPIPQPPAYPII 42


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 409 SSKFWTKLSPIPLAPPVIIT 350
           ++KF TK S  P   PV++T
Sbjct: 174 TTKFTTKPSTKPTNKPVVVT 193


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/39 (23%), Positives = 18/39 (46%)
 Frame = -1

Query: 421 LISSSSKFWTKLSPIPLAPPVIITTLSFKSYISIIVYSK 305
           +++ +  F+      P+A  +   TL F   +  I+Y K
Sbjct: 206 ILNQTVNFYNSAFGWPIAFLIFFATLDFLDNVDTIMYEK 244


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -3

Query: 545 KFFIDSDVTLYEFYFRISIFSHHFIL 468
           ++++D      +    I+ + HHFIL
Sbjct: 239 RYWLDGGADPQKVTIGIAFYGHHFIL 264


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,040
Number of Sequences: 336
Number of extensions: 2885
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)