Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0870
(697 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 50 2e-07
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 50 3e-07
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 44 2e-05
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 42 8e-05
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 40 3e-04
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 39 8e-04
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 38 0.001
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 38 0.001
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 38 0.001
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 37 0.002
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 34 0.022
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 33 0.039
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 33 0.052
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 32 0.090
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 30 0.28
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 28 1.1
SPBC3B9.18c |vma7||V-type ATPase subunit F |Schizosaccharomyces ... 26 5.9
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 7.8
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 25 7.8
SPBC2A9.02 |||NAD dependent epimerase/dehydratase family protein... 25 7.8
SPCC645.08c |snd1||RNA-binding protein Snd1|Schizosaccharomyces ... 25 7.8
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 25 7.8
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 50.4 bits (115), Expect = 2e-07
Identities = 29/122 (23%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Frame = +3
Query: 315 TIIEMYDLKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYA 494
T ++ DL KV ++TG + GIG L + K + + + E + + ++ E
Sbjct: 33 TFNDIPDLTGKVALVTGSSGGIGYVTALELARKGAK-VYLAGRNEEKYQKVMKQIHDEVR 91
Query: 495 NSKVKFIQCDVTVDEELFGAFDDVVKEIGYIDLVINNAGIAN---ESDPKAIRKEVEVNY 665
+SK++F++ D+ E ++ A + + + + +++NNAGI N E +++ NY
Sbjct: 92 HSKIRFLRLDLLDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFELTKDGYELQIQTNY 151
Query: 666 IA 671
++
Sbjct: 152 LS 153
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 50.0 bits (114), Expect = 3e-07
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Frame = +3
Query: 318 IIEMYDLKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYAN 497
I+++ LK K ++ GGA GIG + E + +T GE K + +
Sbjct: 13 ILDLLSLKGKNAVVFGGARGIGHAICSVFAEAGANAFIVYNTT--PGEKAA-KEIAQANG 69
Query: 498 SKVKFIQCDVTVDEELFGAFDDVVKEIGYIDLVINNAGI-----ANESDPKAIRKEVEVN 662
K +CDVT+ +E+ AF ++ K ID+V+ N GI A + + E+ VN
Sbjct: 70 VKTYTCKCDVTIPKEVEHAFAEIQKVFDTIDIVVPNNGICTGKSAIDMTYEEFANEINVN 129
Query: 663 YIALVN 680
+ + N
Sbjct: 130 LLGVFN 135
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 44.4 bits (100), Expect = 2e-05
Identities = 31/114 (27%), Positives = 61/114 (53%)
Frame = +3
Query: 336 LKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFI 515
++ +VV+ITG A GIG+ + E + I D+ +QD + +
Sbjct: 3 VEGRVVLITGAAGGIGKVLCKMFTELGDRVAGI---DIVDPSKVQDAALA---------L 50
Query: 516 QCDVTVDEELFGAFDDVVKEIGYIDLVINNAGIANESDPKAIRKEVEVNYIALV 677
Q DV+ +++ A + V++ +G ID++INNAG+A+++ + + E + ++LV
Sbjct: 51 QADVSKADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLV 104
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 41.9 bits (94), Expect = 8e-05
Identities = 27/101 (26%), Positives = 53/101 (52%)
Frame = +3
Query: 327 MYDLKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKV 506
M L K ++ITG ++GIG+S + + + + E + ++ ++Y S +
Sbjct: 1 MSRLDGKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVL 60
Query: 507 KFIQCDVTVDEELFGAFDDVVKEIGYIDLVINNAGIANESD 629
++ DV+ + + G + + KE ID++INNAG+A +D
Sbjct: 61 P-LKLDVSDLKSIPGVIESLPKEFADIDVLINNAGLALGTD 100
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 39.9 bits (89), Expect = 3e-04
Identities = 27/91 (29%), Positives = 44/91 (48%)
Frame = +3
Query: 342 DKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFIQC 521
+K+ I GG GIG S V+ L + + EA LQ+ ++S V I+
Sbjct: 5 NKIYFIAGGNRGIGLSLVKELSNREGTVVFASARKPEAATELQE---WSKSHSNVHIIKL 61
Query: 522 DVTVDEELFGAFDDVVKEIGYIDLVINNAGI 614
D++ E A +V K +G +D++ N+GI
Sbjct: 62 DISSLESANEAAQEVAKAVGKVDVLWVNSGI 92
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 38.7 bits (86), Expect = 8e-04
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Frame = +3
Query: 324 EMYDLKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSK 503
+ Y +++ITGG+ +G + +Q L+ +A LD+ E LQ NSK
Sbjct: 29 QSYSCAKGLIVITGGSGILGHAIIQEALDRGFS-VASLDS-TEPASFLQ-------YNSK 79
Query: 504 VKFIQCDVTVDEELFGAFDDVVKEIGYIDLVINNAGIANESDPKAI-RKEVEVNYIALVN 680
++C++T D+++ G + K +IN A IA ++ +I R+E++ + V
Sbjct: 80 FSALKCNITKDKDVEGCVHSLKKMNRTPFALINAAAIAPKNHLLSISRQELQKCFETNVI 139
Query: 681 GTL 689
G L
Sbjct: 140 GQL 142
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 38.3 bits (85), Expect = 0.001
Identities = 28/87 (32%), Positives = 44/87 (50%)
Frame = +3
Query: 351 VIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFIQCDVT 530
V+ITG + G+G + V+ L + IA D + E+ SK+ ++ DVT
Sbjct: 8 VLITGSSKGLGYALVKVGLAQGYNVIAC--------SRAPDTITIEH--SKLLKLKLDVT 57
Query: 531 VDEELFGAFDDVVKEIGYIDLVINNAG 611
+ + AF D + G +D+VINNAG
Sbjct: 58 DVKSVETAFKDAKRRFGNVDIVINNAG 84
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 38.3 bits (85), Expect = 0.001
Identities = 28/91 (30%), Positives = 42/91 (46%)
Frame = +3
Query: 342 DKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFIQC 521
+KV I GG GIG S V+ L + + EA LQ+ ++ VK ++
Sbjct: 5 NKVYFIAGGNRGIGLSLVKELSSREGTTVFASARKPEAATELQE---WSKSHPNVKTVEL 61
Query: 522 DVTVDEELFGAFDDVVKEIGYIDLVINNAGI 614
DVT + A V K + ID++ N+GI
Sbjct: 62 DVTSQQSANEAAQSVAKAVDGIDVLWLNSGI 92
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 37.9 bits (84), Expect = 0.001
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Frame = +3
Query: 327 MYDLKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKV 506
M + +KV+++TG + GIG + + L++ K IA+ L ++ T +
Sbjct: 1 MAETAEKVILLTGSSKGIGLATAE-ALQKKAKVIAV-------SRSLTPELETLLIQNPD 52
Query: 507 KFIQCDVTVDEELFGAFDDVVKEIGYIDLVINNAGIAN------ESDPKAIRKEVEVNYI 668
F+ V E + + +K+ G +D VI NAG+ ++D RK ++N+
Sbjct: 53 SFVHVKGDVTEVGKASIETAIKKFGKLDSVILNAGVLEPIAKIADADINEWRKLFDINFF 112
Query: 669 ALV 677
++V
Sbjct: 113 SVV 115
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 37.1 bits (82), Expect = 0.002
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = +3
Query: 327 MYDLKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKV 506
M+ LK K +ITGG+ GIG S + + + +A E + + + +
Sbjct: 4 MFSLKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAAE--LRDKHGVQA 61
Query: 507 KFIQCDVTVDEELFGAFDDVVKEI-GYIDLVINNAGIA 617
K C + + + V+E+ G +D++I NAGIA
Sbjct: 62 KAYSCPIENRSAVIETTNQAVEELGGRLDVMIANAGIA 99
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 33.9 bits (74), Expect = 0.022
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +3
Query: 348 VVIITGGANGIGESFVQNLL-EEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFIQCD 524
V +I GG GIG S V+ L +E + A A E L+D T +S V I+ D
Sbjct: 8 VYVIVGGNRGIGLSLVKELSNKEGVTVFASARGPGSASE-LKDWSKT---HSNVHIIKLD 63
Query: 525 VTVDEELFGAFDDVVKEIGYIDLVINNAGIANESDP 632
VT A V K + ID++ N+GI+ P
Sbjct: 64 VTSLRSAKDAAMQVEKVVKCIDVLWVNSGISKSFQP 99
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 33.1 bits (72), Expect = 0.039
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +3
Query: 336 LKDKVVIITGGANGIGESFVQNLLEEDIKF-IAILDTDVEAGEMLQDKMMTEYANSKVKF 512
L +K ++TGG +GIG++ E I+ L + + E+ +D + E N +
Sbjct: 40 LAEKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTRDLIEREGRNCWIWE 99
Query: 513 IQCDVTVDEELFGAFDDVVKEIGYIDLVINN 605
+ D + + D +K++G+ID+++NN
Sbjct: 100 GKLDKS--DNCRDLVDFALKKLGWIDVLVNN 128
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 32.7 bits (71), Expect = 0.052
Identities = 25/116 (21%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Frame = +3
Query: 351 VIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTE-YANSKVKFIQCDV 527
+++TGG+ G+G++ + L+ + T + E + + ++ + + +V F D+
Sbjct: 25 ILVTGGSQGLGKAIAKELVLRGANVTIVARTVTKLQEAVAELSDSKIHEDQQVSFESVDL 84
Query: 528 TVDEELFGAFDDVVKEIGYI-DLVINNA-----GIANESDPKAIRKEVEVNYIALV 677
T E + +++ + + D V++ A G E DP K++ NY+A V
Sbjct: 85 TSYESV----HSMIERLPFCPDHVVHCAGSCIPGFFTELDPSVFEKQMRQNYLASV 136
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 31.9 bits (69), Expect = 0.090
Identities = 25/97 (25%), Positives = 42/97 (43%)
Frame = +3
Query: 342 DKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFIQC 521
+K+ I GG GIG S V+ L + A LQ+ ++S V I+
Sbjct: 5 NKIYFIAGGNRGIGLSLVKELSNRKGTVVFASARKPGAATKLQE---WSKSHSNVHIIKL 61
Query: 522 DVTVDEELFGAFDDVVKEIGYIDLVINNAGIANESDP 632
DV+ E A +V K + +D++ N+ + + P
Sbjct: 62 DVSSLESANEAAQEVTKVVDAVDVLWVNSAVFHSFGP 98
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 30.3 bits (65), Expect = 0.28
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +3
Query: 348 VVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFIQCDV 527
VV++TGG++GIG+ V+ L + + +L T E + D +M +K + I +V
Sbjct: 77 VVMVTGGSSGIGQVVVEKLASLGAQVVILLRT--EPDQFTVDYIMDLRKRTKNQLIYTEV 134
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 345 KVVIITGGANGIGESFVQNLLEEDIKFIAILDTD 446
KV+++ GA GIG ++NLL +K + I+D D
Sbjct: 27 KVLLV--GAGGIGCELLKNLLMSGVKEVHIIDLD 58
>SPBC3B9.18c |vma7||V-type ATPase subunit F |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 120
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = +3
Query: 438 DTDVEAGEMLQDKMMTEYANSKVKFIQCDVTVDEELFGAFDDVVKEIGYIDLVINN 605
D D G +L K FI T DE++ AFDD + I +V+ N
Sbjct: 17 DDDTVTGMLLAGTGQVNENGDKNFFIITQKTTDEQIAEAFDDYTTKRKDIAIVLIN 72
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 7.8
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +3
Query: 333 DLKDKVVIITGGANGIGESFVQNLLEEDIK 422
+++D ++TGG+NG SFV+ L + ++
Sbjct: 608 EVEDFEKVLTGGSNGFMFSFVEGALVKAVR 637
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 25.4 bits (53), Expect = 7.8
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -1
Query: 409 SSKFWTKLSPIPLAP-PVIITTLSFKSYISIIVYSK 305
SSK W KLS +P P P TLS +++ K
Sbjct: 327 SSKHWYKLSDLPFTPSPRSSHTLSCSGLTLVLIGGK 362
>SPBC2A9.02 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 25.4 bits (53), Expect = 7.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 351 VIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEM 464
+ +TG A IG V+ LLE + + ++ ++ A ++
Sbjct: 3 IFVTGAAGFIGSEIVRQLLEAGHEVVGLVRSEENAAKL 40
>SPCC645.08c |snd1||RNA-binding protein Snd1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 878
Score = 25.4 bits (53), Expect = 7.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 100 SLMTTIKCFIVLTSSY*ISRYHCKCAQQTCY 192
SL T K +++ + SR+ C C ++ CY
Sbjct: 488 SLQRTRKLSVIIENVISGSRFRCFCPKENCY 518
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 25.4 bits (53), Expect = 7.8
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +3
Query: 336 LKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQD--KMMTEYANSKVK 509
LKD++V ITG + ES ++ + + + +A ++ + M E V+
Sbjct: 725 LKDELVTITGETTDLQESMHHKSRMLELVVLELHTLEQQANDLKSELSSEMDELDPKDVE 784
Query: 510 FIQCDVTVDEELFGAFDDVVKEIGYID 590
++ E L FD ++KE +I+
Sbjct: 785 ALKSLSGQIENLSHEFDAIIKERAHIE 811
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,575,713
Number of Sequences: 5004
Number of extensions: 48552
Number of successful extensions: 148
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 321151040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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