Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0870
(697 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05) 67 1e-11
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 54 8e-08
SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_32677| Best HMM Match : SapB_1 (HMM E-Value=4.1) 50 2e-06
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 44 1e-04
SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 42 5e-04
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 41 8e-04
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 40 0.001
SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_33638| Best HMM Match : adh_short (HMM E-Value=0.0014) 36 0.024
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 36 0.024
SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08) 36 0.031
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 35 0.055
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 34 0.13
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 33 0.17
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 32 0.39
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45) 32 0.39
SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08) 32 0.51
SB_36982| Best HMM Match : adh_short (HMM E-Value=1.4e-05) 32 0.51
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_15825| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_9261| Best HMM Match : Chitin_synth_2 (HMM E-Value=2.7e-07) 29 2.7
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 29 4.8
SB_28078| Best HMM Match : SGS (HMM E-Value=1.5) 28 6.3
SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86) 28 6.3
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_20385| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05)
Length = 201
Score = 66.9 bits (156), Expect = 1e-11
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Frame = +3
Query: 336 LKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFI 515
++ V I+TGG GIG + + LL+ D K + +LD + + G + Y+ +V FI
Sbjct: 3 IEGTVAIVTGGVQGIGLAISKALLDRDGK-VCMLDINEKTGNETLKLLSENYSKHRVLFI 61
Query: 516 QCDVTVDEELFGAFDDVVKEIGYIDLVINNAGIA-NESD---PKAIRKEVEVNYIALVNG 683
+CDVT ++ AF G +D++ NNAGIA E+D A + +++N ++ G
Sbjct: 62 KCDVTSQPQMEAAFQRTKDVFGRLDILCNNAGIAVRENDLLRSGAWKTIIDINVKGVILG 121
Query: 684 TL 689
TL
Sbjct: 122 TL 123
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 54.4 bits (125), Expect = 8e-08
Identities = 32/115 (27%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Frame = +3
Query: 342 DKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFIQC 521
D++V+ITG +GIG+ + K + + D + +A + Q + + N K +C
Sbjct: 53 DEIVLITGAGSGIGKGMAIEFAKIGAKIVCV-DINKQAND--QTVEVIKSLNQKAFGYKC 109
Query: 522 DVTVDEELFGAFDDVVKEIGYIDLVINNAGIAN-----ESDPKAIRKEVEVNYIA 671
D + E+++ D V +E+G + +++NNAGI + +++ I+K +EVN +A
Sbjct: 110 DCSSREDIYRVADIVKREVGEVTILVNNAGIVSGKKFLDTEDWMIQKTMEVNTMA 164
>SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 51.2 bits (117), Expect = 8e-07
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = +3
Query: 405 LEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFIQCDVTVDEELFGAFDDVVKEIGY 584
L D+ + ++D +AG + + ++ + V FI CDV+ ++L AF + V G+
Sbjct: 17 LHVDLFPVVLVDLQKKAGNDVTCLLQNKHGSGSVSFISCDVSNQDQLKDAFWETVSTHGH 76
Query: 585 IDLVINNAGIANE 623
+D+V NNAGI +E
Sbjct: 77 LDIVFNNAGILDE 89
>SB_32677| Best HMM Match : SapB_1 (HMM E-Value=4.1)
Length = 256
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +3
Query: 426 IAILDTDVEAGEMLQDKMMTEYANSKVKFIQCDVTVDEELFGAFDDVVKEIGYIDLVINN 605
+ I+D + +G Q+ + ++ +FI+CDV E+L A VK+ +D++ NN
Sbjct: 66 VRIIDICINSGLKAQENLEAQFGPGTAEFIECDVCNREKLSEAIRQTVKDHSKLDILCNN 125
Query: 606 AGIANESD-PKAIRKEVEVNYIALVNGTLK 692
AGI +E + PK++ + +I +G ++
Sbjct: 126 AGIIDEKNWPKSVELNLFSQFIEGYSGYIE 155
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +3
Query: 345 KVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFIQCD 524
+V I+TGGA+GIG++ V+ L E +AILD + E G+ ++ + + + +KVKF D
Sbjct: 25 RVAIVTGGASGIGKATVERLAREGAS-VAILDINDELGQQVETDLRS--SGNKVKFYHVD 81
Query: 525 VTVDEELFGAFDDVVKEIG-YIDLVINNA 608
V + V + G + +++NNA
Sbjct: 82 VANKDMCAHVVGCVAADHGSAVHILVNNA 110
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/93 (26%), Positives = 51/93 (54%)
Frame = +3
Query: 336 LKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFI 515
L+ + V+ITG A+GIG L ++ K + + D ++EA + + ++ ++ +
Sbjct: 33 LRGETVLITGAASGIGRLTALILAKKGCKLV-LWDINLEALKAVAQEIQD--LGAETHYF 89
Query: 516 QCDVTVDEELFGAFDDVVKEIGYIDLVINNAGI 614
+CDV +E+ + V + G + ++INNAG+
Sbjct: 90 ECDVRKKDEVEKVANAVEDQAGNVTILINNAGV 122
>SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/104 (25%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Frame = +3
Query: 336 LKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKV--K 509
L K VI+TG +GIG++ L + I D+E+ E ++ + ++V +
Sbjct: 66 LHGKTVIVTGANSGIGKATALELARRGARVIMAC-RDLESAEKAASEIRYKVPKAEVVCR 124
Query: 510 FIQCDVTVDEELFGAFDDVVKEIGYIDLVINNAGIANESDPKAI 641
F+ + + F +DV++E +D+++NNAG+ ++ K +
Sbjct: 125 FLDLNSLISVRKFA--EDVMREEKRLDILVNNAGVYQPANKKTV 166
>SB_8042| Best HMM Match : DUF803 (HMM E-Value=0)
Length = 603
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/94 (27%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Frame = +3
Query: 336 LKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKF- 512
L+ +V I+TG ++GIG + + L E +K +A+ E L+D+++ AN V
Sbjct: 102 LEGQVAIVTGASSGIGAAVAKALAEAGVK-VALAARREERLTQLRDEII---ANGDVAIS 157
Query: 513 IQCDVTVDEELFGAFDDVVKEIGYIDLVINNAGI 614
++ DVT+ E++ +G +D++++ AG+
Sbjct: 158 VKTDVTIKEQMESLVKRTDSTLGPVDILVSCAGV 191
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 41.1 bits (92), Expect = 8e-04
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +3
Query: 345 KVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFI-QC 521
KV +ITG ++GIG + L ++ K + T + + + A FI +
Sbjct: 4 KVAVITGCSSGIGLATASILAKDGEKRFRVYATMRNLDKKGSLESACQNALGDTLFIREL 63
Query: 522 DVTVDEELFGAFDDVVKEIGYIDLVINNAGIAN 620
DV+ D+ + A + + +E G ID+++NNAGI++
Sbjct: 64 DVSSDDSVEEALNAIYEEEGRIDILVNNAGISH 96
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/93 (25%), Positives = 44/93 (47%)
Frame = +3
Query: 336 LKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFI 515
L +KV++ITG + GIG + + + A E L ++ A + +
Sbjct: 5 LMEKVMLITGASRGIGAATARLAAAQGYALCLNYQRQQAAAEALVSEITQ--AGGRAIAV 62
Query: 516 QCDVTVDEELFGAFDDVVKEIGYIDLVINNAGI 614
Q DV + ++ F + + G +D+++NNAGI
Sbjct: 63 QADVADERQVMQLFARLDQHFGRLDVLVNNAGI 95
>SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Frame = +3
Query: 357 ITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFIQCDVTVD 536
+TGG GIG VQ L+++ I + E GE + +V++ + DVT +
Sbjct: 28 VTGGNRGIGYCVVQQLVQQFDGNIILTARSDEQGEAACRSLNV---GGRVEYHKLDVTSN 84
Query: 537 EELFGAFDDVVKEIGYIDLVINNAGI-ANESDPKAIRKEVE 656
+ + V ++ G +D+++NNAGI ES + ++ E
Sbjct: 85 DSIHELTLHVQEKYGGLDILVNNAGILKKESSGTSYARKAE 125
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Frame = +3
Query: 333 DLKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAG--EMLQDKMMTEYANSKV 506
D +VV++TG ++GIG + L + K + T G + L +K + +
Sbjct: 31 DKFQRVVVVTGCSSGIGLALAVLLSHDADKRFKVYATMRNLGKKDALLEKC-SGVVEDLL 89
Query: 507 KFIQCDVTVDEELFGAFDDVVKEIGYIDLVINNAGIANESDPK-----AIRKEVEVNYIA 671
+ DV DE + ++V++ G ID+++NNAGI P+ AI K E N
Sbjct: 90 NIKELDVCSDESVKAVVAEIVEKEGRIDVLVNNAGIGLFCVPECATTDAINKVFEPNVYG 149
Query: 672 LVNGT 686
L+ T
Sbjct: 150 LMRMT 154
>SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/104 (28%), Positives = 48/104 (46%)
Frame = +3
Query: 336 LKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFI 515
LK K VIITG +GIG ++L + I + DV G +++ N V+
Sbjct: 70 LKGKTVIITGANSGIGMEVARDLAWRKARVI-MACRDVHKGMKAAAEIVQSAGNMDVEVK 128
Query: 516 QCDVTVDEELFGAFDDVVKEIGYIDLVINNAGIANESDPKAIRK 647
+ D+ + +V +E +D++INNAG S K + K
Sbjct: 129 KLDLASFASIREFAKEVNEEESRVDVLINNAGYLG-SQKKTVDK 171
>SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 37.1 bits (82), Expect = 0.014
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +3
Query: 348 VVIITGGANGIGESFVQNLLEEDIKFIAILDT--DVEAGEMLQDKMMTEYANSKVKFIQC 521
+V+ITG + GIG + L ++D + + T ++E +L++ + ++ + Q
Sbjct: 198 IVLITGCSTGIGLAAALLLAKDDGRRFKVYATMRNLEKRGILEEAARRQLGDTLI-VKQL 256
Query: 522 DVTVDEELFGAFDDVVKEIGYIDLVINNAGI 614
DVT DE + + ID+++NNAG+
Sbjct: 257 DVTSDESVTEVLQSIYSAERRIDVLVNNAGV 287
>SB_33638| Best HMM Match : adh_short (HMM E-Value=0.0014)
Length = 268
Score = 36.3 bits (80), Expect = 0.024
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +3
Query: 297 NIFFE*TIIEMYD-LKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQD 473
N F IEM L ++ ++TGG GIG + L + I + + E E +
Sbjct: 65 NKAFSYVCIEMSKALSNRYALVTGGTRGIGLAISHKLAKNGYYLILGYNANDERAEKAKS 124
Query: 474 KMMTEYANSKVKFIQCDVTVDEELFGAFDDVVKEI-GYIDLVINNAGI 614
++ ++Y N +V ++ DV D + F+ + ++ ++NAG+
Sbjct: 125 ELESKY-NVRVFTVKGDVAEDSTINAFFESIKANFDNKLNAFVHNAGL 171
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 36.3 bits (80), Expect = 0.024
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = +3
Query: 345 KVVIITGGANGIGESFVQNLLEEDIKFIAIL---DTDVEAGE-MLQDKMMTEYANSKVKF 512
+VV++TG NG+G + E + DT E DK++ E K
Sbjct: 11 RVVLVTGAGNGLGRQYALAFAERGASVVVNDLGGDTKGEGKSGRAADKVVQEIRAKGGKA 70
Query: 513 IQCDVTVDEELFGAFDDVVKEIGYIDLVINNAGIANE 623
+ D E+ + +K G ID+V+NNAGI +
Sbjct: 71 V-ADYNSVEQGDQVVETAIKAFGRIDVVVNNAGILRD 106
>SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08)
Length = 272
Score = 35.9 bits (79), Expect = 0.031
Identities = 22/103 (21%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 348 VVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFIQCDV 527
V ++TG A +G V+ L + + + E E + +M + ++S + ++ D+
Sbjct: 14 VALVTGAAKRLGAGIVRALHGSGFRVVIHYNNSGEDAEKIVQEMNSVRSDSAI-MLKADL 72
Query: 528 T--VDEELFGAFDDVVKEIGYIDLVINNAGIANESDPKAIRKE 650
+ + E +D V G +DL++NNA ++ ++++E
Sbjct: 73 STNIQETARKLIEDTVTAFGQLDLLVNNASQFCPTESGSVQEE 115
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 35.1 bits (77), Expect = 0.055
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +3
Query: 345 KVVIITGGANGIGESFVQNLLEEDIKFIAILDTD--VEAGEMLQDKMMTEYANSKVKFIQ 518
KV I+TGG GIG++ LL K + ++ ++ + +K + ++++VK I
Sbjct: 17 KVAIVTGGGTGIGKAIAAELLSLGSKVVIASRSEGKLQKAAVDLEKFIPPSSSAEVKVIP 76
Query: 519 CDVTVDEELFGAFDDVVKEIGYIDLVINN 605
C++ + ++ + + Y L + N
Sbjct: 77 CNIRKESQVTNLMESSMSSY-YFSLKVTN 104
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/96 (26%), Positives = 42/96 (43%)
Frame = +3
Query: 345 KVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFIQCD 524
K+V ITG + G+G + + + + + + EM + N +F D
Sbjct: 3 KIVAITGVSTGLGLALTKWFSSQGHTVVGCGRSAAKIAEMNEKYCGKGKPN---QFYVVD 59
Query: 525 VTVDEELFGAFDDVVKEIGYIDLVINNAGIANESDP 632
+T D + +V K G D V+NNAG N++ P
Sbjct: 60 ITDDSVVKEWATNVCKSFGPPDFVLNNAGFVNQNAP 95
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Frame = +3
Query: 531 VDEELFGAFDDVVKEIGYIDLVINNAGIAN-----ESDPKAIRKEVEVNYIA 671
V EE++ V E+G +D+++NNAGI + + I+K +E+N +A
Sbjct: 1282 VREEIYATASRVKGEVGDVDILVNNAGILHGKRLLDQTDAQIQKAIELNLLA 1333
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 32.7 bits (71), Expect = 0.29
Identities = 30/93 (32%), Positives = 46/93 (49%)
Frame = +3
Query: 336 LKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFI 515
LK+KVV+++ A GIG++ E K IA TD+ A E L++ ++V
Sbjct: 14 LKNKVVVLSAAAQGIGKATALACAREGAKVIA---TDINA-EKLKELHSVPGIETRV--- 66
Query: 516 QCDVTVDEELFGAFDDVVKEIGYIDLVINNAGI 614
DVT D E F E+ +D++ N AG+
Sbjct: 67 -VDVT-DYEAIKKF---ASEVDRVDVLFNCAGL 94
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 32.3 bits (70), Expect = 0.39
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 13/130 (10%)
Frame = +3
Query: 336 LKDKVVIITGGANGIGESFVQNLLEEDIKFI------AILDTDVEAGEMLQDKMMTEY-A 494
L +V ITG ++GIGE+ L + K + + L+ E + + T Y A
Sbjct: 40 LYGRVCWITGASSGIGENLAYELAKFGCKLVLSARRRSELERVKEQCIAIAKEANTSYNA 99
Query: 495 NSKVKFIQCDVTVDEELFGAFDDVVKEIGYIDLVINNA-----GIANESDPKAIRKE-VE 656
+ + + DVT ++ V+ ID++INN+ G+A E+ + K ++
Sbjct: 100 DQDILVLPMDVTEYDKHTELVRSVLDHFNKIDILINNSGRSQRGLAVETPGIEVEKAMLD 159
Query: 657 VNYIALVNGT 686
+N++A+V+ T
Sbjct: 160 LNFLAVVSLT 169
>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
Length = 620
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/98 (19%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = +3
Query: 336 LKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFI 515
L+ ++ ++TGG +GIG + + L ++++D + + + T ++
Sbjct: 191 LRGRLALVTGGGSGIGRAVCEALANRGAS-VSVIDLHGVGAKETSENLATHNDTTRHTHF 249
Query: 516 QCDVTVDEELFGAFDDVVKEIGYID-LVINNAGIANES 626
+V E+ + KE +++N+AGIA ++
Sbjct: 250 AVNVASSSEVKDLLQAIHKEYQRAPCILVNSAGIAKDA 287
>SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08)
Length = 316
Score = 31.9 bits (69), Expect = 0.51
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = +3
Query: 336 LKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFI 515
L K VIITG GIG+ +L + + I I +++ G + + +V
Sbjct: 35 LDGKTVIITGATTGIGKETAVDLAKRGARVI-IGARNLDRGNAAVRDIQASSGSQQVFVE 93
Query: 516 QCDVTVDEELFGAFDDVVKEIGYIDLVINNAGIA 617
D+ + + + K+ +D+++NNAG+A
Sbjct: 94 HLDLASLSSVRKFAEVINKKEERVDILMNNAGVA 127
>SB_36982| Best HMM Match : adh_short (HMM E-Value=1.4e-05)
Length = 258
Score = 31.9 bits (69), Expect = 0.51
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +3
Query: 348 VVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFIQCDV 527
+ ++ G + GIG F ++LL F+ + + LQD + + Y + F + D
Sbjct: 4 LALVQGASRGIGLQFCRHLLARGNGFVLATCRNPTNAKELQD-LRSNYPKNMAIF-ELDA 61
Query: 528 TVDEELFGAFDDVVKEI--GYIDLVINNAGIANES 626
+EE A D++KE +DL++N AG+ + S
Sbjct: 62 H-NEEKIKATADMIKENHGSKLDLLLNCAGMLHPS 95
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 31.1 bits (67), Expect = 0.89
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 405 LEEDIKFIAILDTDVE--AGEMLQDKMMTEYANSKVKFIQCDVTVDEEL 545
LE+ +K + I +++E AGE L K E AN K+K +Q + EL
Sbjct: 1098 LEQTVKEVEIKTSELETRAGETLLAKESLEVANKKIKELQAQLLTAREL 1146
>SB_15825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 345 KVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEY---ANSKVKFI 515
KV I+TGG+ GIGE V+ E D +I DT V+ E L + Y + +
Sbjct: 13 KVTIVTGGSKGIGEGVVR---EFDPDATSIDDTSVQDFENLFKLNVVSYFIMCKGAITSM 69
Query: 516 QCDVTVDEELFG 551
+ +DE +G
Sbjct: 70 TRALAIDEAAYG 81
>SB_9261| Best HMM Match : Chitin_synth_2 (HMM E-Value=2.7e-07)
Length = 2435
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 489 YANSKVKFIQCDVTVDEEL-FGAFDDVVKEIGYIDLVINNAGIANESDPKAIRKEVEVNY 665
++ SK + DV +DE + F A +D V++ + N+ + +DPK + E+E NY
Sbjct: 305 HSRSKYVAKETDVDIDESIMFDARNDRVEKGRRLASQSNSPTESEPNDPKLVTNELERNY 364
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/93 (24%), Positives = 40/93 (43%)
Frame = +3
Query: 336 LKDKVVIITGGANGIGESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFI 515
L+ V +I GGA+GIG + L+ + + I+D G+ + S FI
Sbjct: 286 LEKVVALIAGGASGIGRATAIRLIRAGARAV-IVDLPSSEGQNTAQEF-----GSHCTFI 339
Query: 516 QCDVTVDEELFGAFDDVVKEIGYIDLVINNAGI 614
V + E+ A ++ G ++ IN A +
Sbjct: 340 PGHVDSESEIKAAIKVAKEKYGCVNASINTAAL 372
>SB_28078| Best HMM Match : SGS (HMM E-Value=1.5)
Length = 934
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 55 SGLSILP*KLVLRDCSLMTTIKCFIVLTS 141
+GLS+LP K C+L TT C + TS
Sbjct: 192 AGLSVLPTKSESSSCALTTTPSCALTTTS 220
>SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86)
Length = 1110
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 55 SGLSILP*KLVLRDCSLMTTIKCFIVLTS 141
+GLS+LP K C+L TT C + TS
Sbjct: 44 AGLSVLPTKSESSSCALTTTPSCALTTTS 72
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/65 (24%), Positives = 34/65 (52%)
Frame = +3
Query: 381 GESFVQNLLEEDIKFIAILDTDVEAGEMLQDKMMTEYANSKVKFIQCDVTVDEELFGAFD 560
G V +++ + +++ T VE G + + A +KV+ + D+T+DE+ F F+
Sbjct: 1220 GAGAVMSIVSIGLDLYSLISTFVECG---RKQSQARDAMAKVEKAESDLTLDEQKFAQFE 1276
Query: 561 DVVKE 575
+K+
Sbjct: 1277 IELKK 1281
>SB_20385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 303 FFE*TIIEMYDLKDKVVIITGGANGIGESFVQNLLEEDIKF-IAILDTDVEAGEMLQDKM 479
F E +E L +KV++ G G+G + + LLEE F D A +++
Sbjct: 422 FTELLNVEDEKLNEKVLLEAGC--GVG-NLINPLLEEGYNFYFHACDFSPRAVNFVKESP 478
Query: 480 MTEYANSKVKFIQCDVTVDEEL 545
Y +KV QCD+T D+ L
Sbjct: 479 F--YDEAKVNAFQCDLTKDDLL 498
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,863,528
Number of Sequences: 59808
Number of extensions: 311064
Number of successful extensions: 675
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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