Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0869
         (722 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122199-1|AAM52711.1|  308|Drosophila melanogaster LD46156p pro...   183   3e-46
AE013599-3120|AAF46666.1|  296|Drosophila melanogaster CG10527-P...   183   3e-46
AY069859-1|AAL40004.1|  313|Drosophila melanogaster SD10415p pro...    38   0.014
AE013599-3342|AAF46805.1|  585|Drosophila melanogaster CG6698-PA...    38   0.014
AY060696-1|AAL28244.1|  291|Drosophila melanogaster GH13859p pro...    29   6.4  
AE013599-3338|AAM68209.1|  291|Drosophila melanogaster CG30281-P...    29   6.4  
AE014298-2877|AAF48974.1|  348|Drosophila melanogaster CG14218-P...    29   8.5  

>AY122199-1|AAM52711.1|  308|Drosophila melanogaster LD46156p
           protein.
          Length = 308

 Score =  183 bits (445), Expect = 3e-46
 Identities = 75/138 (54%), Positives = 103/138 (74%)
 Frame = +3

Query: 66  MDVATDDNLQYQFFPVSSGSVQFKVRAANDAHIALTTGPQESDPMYEVMIGGWGNAKSVI 245
           ++V T D L+YQFFP S G   FKVR+  DAH+ALT  P+E+ P++E+ +GGW N KSVI
Sbjct: 15  IEVNTPDKLEYQFFPASGGVFTFKVRSPKDAHLALTPAPEENGPIFEIFLGGWENTKSVI 74

Query: 246 RKNRTKPDKVEIESPGILNGGEYRGFWVRWDSGIISAGREGEAIPFISWSDPEPFPVYYV 425
           RK+R KP+  E+ +PGIL+ GE+RGFWVRW   +I+ GREG+A  F+S+     FPV +V
Sbjct: 75  RKDRQKPEVAEVPTPGILDAGEFRGFWVRWYDNVITVGREGDAAAFLSYDAGSLFPVNFV 134

Query: 426 GVCTGWGATGSWKIEDGA 479
           G+CTGWGA+G+W I++ A
Sbjct: 135 GICTGWGASGTWLIDEPA 152



 Score = 96.3 bits (229), Expect = 4e-20
 Identities = 41/81 (50%), Positives = 56/81 (69%)
 Frame = +3

Query: 480 EFDTPDRLEYKFGPVASGSLEFDYRGPHNCHVSLTTHPAEVDPMYEIIIGGWENTQSVIR 659
           E +TPD+LEY+F P + G   F  R P + H++LT  P E  P++EI +GGWENT+SVIR
Sbjct: 16  EVNTPDKLEYQFFPASGGVFTFKVRSPKDAHLALTPAPEENGPIFEIFLGGWENTKSVIR 75

Query: 660 YCRQKPDKVTIPTPGIMNPNE 722
             RQKP+   +PTPGI++  E
Sbjct: 76  KDRQKPEVAEVPTPGILDAGE 96


>AE013599-3120|AAF46666.1|  296|Drosophila melanogaster CG10527-PA
           protein.
          Length = 296

 Score =  183 bits (445), Expect = 3e-46
 Identities = 75/138 (54%), Positives = 103/138 (74%)
 Frame = +3

Query: 66  MDVATDDNLQYQFFPVSSGSVQFKVRAANDAHIALTTGPQESDPMYEVMIGGWGNAKSVI 245
           ++V T D L+YQFFP S G   FKVR+  DAH+ALT  P+E+ P++E+ +GGW N KSVI
Sbjct: 3   IEVNTPDKLEYQFFPASGGVFTFKVRSPKDAHLALTPAPEENGPIFEIFLGGWENTKSVI 62

Query: 246 RKNRTKPDKVEIESPGILNGGEYRGFWVRWDSGIISAGREGEAIPFISWSDPEPFPVYYV 425
           RK+R KP+  E+ +PGIL+ GE+RGFWVRW   +I+ GREG+A  F+S+     FPV +V
Sbjct: 63  RKDRQKPEVAEVPTPGILDAGEFRGFWVRWYDNVITVGREGDAAAFLSYDAGSLFPVNFV 122

Query: 426 GVCTGWGATGSWKIEDGA 479
           G+CTGWGA+G+W I++ A
Sbjct: 123 GICTGWGASGTWLIDEPA 140



 Score = 96.3 bits (229), Expect = 4e-20
 Identities = 41/81 (50%), Positives = 56/81 (69%)
 Frame = +3

Query: 480 EFDTPDRLEYKFGPVASGSLEFDYRGPHNCHVSLTTHPAEVDPMYEIIIGGWENTQSVIR 659
           E +TPD+LEY+F P + G   F  R P + H++LT  P E  P++EI +GGWENT+SVIR
Sbjct: 4   EVNTPDKLEYQFFPASGGVFTFKVRSPKDAHLALTPAPEENGPIFEIFLGGWENTKSVIR 63

Query: 660 YCRQKPDKVTIPTPGIMNPNE 722
             RQKP+   +PTPGI++  E
Sbjct: 64  KDRQKPEVAEVPTPGILDAGE 84


>AY069859-1|AAL40004.1|  313|Drosophila melanogaster SD10415p
           protein.
          Length = 313

 Score = 37.9 bits (84), Expect = 0.014
 Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = +3

Query: 126 VQFKVRAANDAHIAL--TTGPQESDPMYEVMIGGWGNAKSVIR 248
           ++F V  A DAHI L  T  P+ +D +YE++IG  GN  S IR
Sbjct: 78  LKFYVLTAMDAHILLSVTNHPRPNDRVYEIVIGAGGNTFSAIR 120



 Score = 33.1 bits (72), Expect = 0.39
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +3

Query: 573 VSLTTHPAEVDPMYEIIIGGWENTQSVIR 659
           +S+T HP   D +YEI+IG   NT S IR
Sbjct: 92  LSVTNHPRPNDRVYEIVIGAGGNTFSAIR 120


>AE013599-3342|AAF46805.1|  585|Drosophila melanogaster CG6698-PA
           protein.
          Length = 585

 Score = 37.9 bits (84), Expect = 0.014
 Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = +3

Query: 126 VQFKVRAANDAHIAL--TTGPQESDPMYEVMIGGWGNAKSVIR 248
           ++F V  A DAHI L  T  P+ +D +YE++IG  GN  S IR
Sbjct: 78  LKFYVLTAMDAHILLSVTNHPRPNDRVYEIVIGAGGNTFSAIR 120



 Score = 33.1 bits (72), Expect = 0.39
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +3

Query: 573 VSLTTHPAEVDPMYEIIIGGWENTQSVIR 659
           +S+T HP   D +YEI+IG   NT S IR
Sbjct: 92  LSVTNHPRPNDRVYEIVIGAGGNTFSAIR 120


>AY060696-1|AAL28244.1|  291|Drosophila melanogaster GH13859p
           protein.
          Length = 291

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 28/88 (31%), Positives = 35/88 (39%)
 Frame = +3

Query: 339 SGIISAGREGEAIPFISWSDPEPFPVYYVGVCTGWGATGSWKIEDGAEFDTPDRLEYKFG 518
           S  ++AG     I  I     EPFPVY      G G T   + +DG+E       EY  G
Sbjct: 66  SSCLAAGINSNGIHVIEVPGLEPFPVYCDTRLAGSGWTVIQRRQDGSENFYRCWEEYSQG 125

Query: 519 PVASGSLEFDYRGPHNCHVSLTTHPAEV 602
                S EF + G    H   T  P E+
Sbjct: 126 -FGELSGEF-FMGLEKLHFLTTAEPYEL 151


>AE013599-3338|AAM68209.1|  291|Drosophila melanogaster CG30281-PA
           protein.
          Length = 291

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 28/88 (31%), Positives = 35/88 (39%)
 Frame = +3

Query: 339 SGIISAGREGEAIPFISWSDPEPFPVYYVGVCTGWGATGSWKIEDGAEFDTPDRLEYKFG 518
           S  ++AG     I  I     EPFPVY      G G T   + +DG+E       EY  G
Sbjct: 66  SSCLAAGINSNGIHVIEVPGLEPFPVYCDTRLAGSGWTVIQRRQDGSENFYRCWEEYSQG 125

Query: 519 PVASGSLEFDYRGPHNCHVSLTTHPAEV 602
                S EF + G    H   T  P E+
Sbjct: 126 -FGELSGEF-FMGLEKLHFLTTAEPYEL 151


>AE014298-2877|AAF48974.1|  348|Drosophila melanogaster CG14218-PA
           protein.
          Length = 348

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -3

Query: 612 TLD--LLLRDEL*GKRGSCAVRGNRIPKNQRRQVQTYTLTCPEYRIPLHLRFSRSLWHP 442
           TLD  LLLR+ L       + + N + +  RR   T T T P    P  +R  + +WHP
Sbjct: 39  TLDFGLLLRNLLLKSAQLSSAKAN-LARTTRRPPTTTTTTPPPPPPPAPIRIRKPIWHP 96


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,139,192
Number of Sequences: 53049
Number of extensions: 806977
Number of successful extensions: 2475
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2475
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)