Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0869
(722 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta... 32 0.44
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta... 32 0.44
At3g10100.1 68416.m01210 filament protein-related similar to YEA... 29 2.4
At2g04300.1 68415.m00422 leucine-rich repeat protein kinase, put... 29 2.4
At2g47180.1 68415.m05892 galactinol synthase, putative similar t... 29 3.1
At4g20730.1 68417.m03013 filament protein-related similar to Cyt... 29 4.1
At3g52460.1 68416.m05769 hydroxyproline-rich glycoprotein family... 29 4.1
At3g07420.1 68416.m00884 asparaginyl-tRNA synthetase 2, cytoplas... 29 4.1
At5g23790.1 68418.m02793 galactinol synthase, putative similar t... 28 5.5
At4g26250.1 68417.m03778 galactinol synthase, putative similar t... 28 5.5
At3g30150.1 68416.m03803 hypothetical protein 28 5.5
At5g50400.1 68418.m06242 calcineurin-like phosphoesterase family... 28 7.2
At4g38770.1 68417.m05490 proline-rich family protein (PRP4) simi... 28 7.2
At4g32200.1 68417.m04582 DNA-binding HORMA domain-containing pro... 28 7.2
At1g09350.1 68414.m01046 galactinol synthase, putative contains ... 28 7.2
At2g13620.1 68415.m01501 cation/hydrogen exchanger, putative (CH... 27 9.5
At1g49430.1 68414.m05541 long-chain-fatty-acid--CoA ligase / lon... 27 9.5
>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 31.9 bits (69), Expect = 0.44
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Frame = +3
Query: 69 DVATDDNLQYQFFPVSSGSVQFKVRAANDAHIAL--TTGPQ------ESDPMYEVMIGGW 224
+ A D+L+++ G V F A ND + G Q ++ P Y V+IG
Sbjct: 16 ECAWSDDLKFR--EAGRGCVAFDAFAHNDVTVVFRENVGTQHYHYKKDNSPHYIVIIGSN 73
Query: 225 GNAKSVIRKNRTKPDKVEIESPGILNGG-EYRGFWVRWDSGIISAGREGEAIPF----IS 389
N + I+ + V+ E+ + E++ +W+ G+IS G+ PF
Sbjct: 74 RNRRLKIQVDGKSV--VDEEASDLCRCSLEFQSYWISIYDGLISIGK--GRYPFQNLVFK 129
Query: 390 WSDPEP-FPVYYVGVCTGW 443
W DP+P V YVG+ + W
Sbjct: 130 WQDPKPNCNVQYVGL-SSW 147
>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 31.9 bits (69), Expect = 0.44
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Frame = +3
Query: 69 DVATDDNLQYQFFPVSSGSVQFKVRAANDAHIAL--TTGPQ------ESDPMYEVMIGGW 224
+ A D+L+++ G V F A ND + G Q ++ P Y V+IG
Sbjct: 16 ECAWSDDLKFR--EAGRGCVAFDAFAHNDVTVVFRENVGTQHYHYKKDNSPHYIVIIGSN 73
Query: 225 GNAKSVIRKNRTKPDKVEIESPGILNGG-EYRGFWVRWDSGIISAGREGEAIPF----IS 389
N + I+ + V+ E+ + E++ +W+ G+IS G+ PF
Sbjct: 74 RNRRLKIQVDGKSV--VDEEASDLCRCSLEFQSYWISIYDGLISIGK--GRYPFQNLVFK 129
Query: 390 WSDPEP-FPVYYVGVCTGW 443
W DP+P V YVG+ + W
Sbjct: 130 WQDPKPNCNVQYVGL-SSW 147
>At3g10100.1 68416.m01210 filament protein-related similar to YEAST
NUF1 protein (Spindle poly body spacer protein SPC110)
(SP:P32380) {Saccharomyces cerevisiae}; similar to
Myosin heavy chain, smooth muscle isoform (SMMHC)
(SP:P35749) {Homo sapiens}
Length = 1004
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 406 LSQFTTSESAQAGVPQAPGKSKMERNSILRTG*SISLDLSPLVLWNS-ITADRTTATFPS 582
LSQF + P ++ E N+ L + DL P+V WN+ ITA +T +T S
Sbjct: 70 LSQFDPLIDLEDAYNTQPQYTEAEVNARLLHEDYVEFDLDPVVSWNTEITAKKTLSTTES 129
>At2g04300.1 68415.m00422 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 851
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +3
Query: 192 DPMYEVMIGGWGNAKSVIRKNRTKPDKVEIESPGILNGGEYRGFWVRWDSGIISAG 359
D ++ + +G ++S + T+ D V +PG L+ YR W+ S + S G
Sbjct: 675 DEHFQAKLADFGLSRSFPLEGETRVDTVVAGTPGYLDPEYYRTNWLNEKSDVYSFG 730
>At2g47180.1 68415.m05892 galactinol synthase, putative similar to
galactinol synthase, isoform GolS-1 GI:5608497 from
[Ajuga reptans]
Length = 344
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 633 WENT-QSVIRYCRQKPDKVTIPTPGIMNP 716
W +T Q IRYC+Q PDKV P + P
Sbjct: 159 WSHTPQYKIRYCQQCPDKVQWPKAELGEP 187
>At4g20730.1 68417.m03013 filament protein-related similar to
Cytadherence high molecular weight protein 2 (SP:P47460)
[Mycoplasma genitalium]; similar to YEAST NUF1
protein (Spindle poly body spacer protein SPC110)
(SP:P32380) {Saccharomyces cerevisiae}; also
SP|Q9UKX2|MYH2_HUMAN Myosin heavy chain, skeletal
muscle, SP|P31732|OV71_ONCVO Muscle cell intermediate
filament protein SP|P12882|MYH1_HUMAN Myosin heavy
chain, skeletal muscle,. SP|Q17107|AV71_ACAVI Muscle
cell intermediate filament protein
Length = 800
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 406 LSQFTTSESAQAGVPQAPGKSKMERNSILRTG*SISLDLSPLVLWNS-ITADRTTATFPS 582
L+QF + P ++ E N+ L + DL P+V WN+ ITA +T +T S
Sbjct: 71 LAQFDPLIDLEDAYNTQPQYTEAEVNARLLHEDHVEFDLDPVVSWNTEITAKKTLSTTES 130
>At3g52460.1 68416.m05769 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 300
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 412 GKGSGSDQDMNGIASPSRPAEIMPLSQRTQKPRYSPPLRIPG 287
G G S++D+N P P + P +TQ+ Y P + PG
Sbjct: 16 GPGQNSERDIN--QPPPPPPQSQPPPPQTQQQTYPPVMGYPG 55
>At3g07420.1 68416.m00884 asparaginyl-tRNA synthetase 2, cytoplasmic
/ asparagine-tRNA ligase 2 (SYNC2) nearly identical to
SP|Q9SW95; HMM hit: tRNA synthetases class II
Length = 638
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 207 VMIGGWGNAKSVIRKNRTKPDKVEIESPGILNGGE 311
V+IGGW + ++KN P + +P +GG+
Sbjct: 50 VVIGGWVKSARAVKKNSPPPPLPVVAAPSPSSGGD 84
>At5g23790.1 68418.m02793 galactinol synthase, putative similar to
galactinol synthase, isoform GolS-1 GI:5608497 from
[Ajuga reptans]; contains Pfam profile: PF01501 glycosyl
transferase family 8
Length = 333
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 633 WENT-QSVIRYCRQKPDKVTIPTPGIMNP 716
W T Q I YC+Q P+KVT P + P
Sbjct: 151 WSKTPQYKIGYCQQSPEKVTWPVESLGAP 179
>At4g26250.1 68417.m03778 galactinol synthase, putative similar to
galactinol synthase, isoform GolS-1 [Ajuga reptans]
GI:5608497; contains Pfam profile: PF01501 glycosyl
transferase family 8
Length = 336
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 633 WENT-QSVIRYCRQKPDKVTIPTPGIMNP 716
W T Q I YC+Q P+KVT P + +P
Sbjct: 154 WSKTPQFKIGYCQQCPEKVTWPVESLGSP 182
>At3g30150.1 68416.m03803 hypothetical protein
Length = 184
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 641 VFPTADDYFIHWIYFCGMSCEGNVAVVRSAVIEFQ 537
+FP D+ W YF M C+ +V VIE Q
Sbjct: 4 IFPIEKDF--SWYYFMCMKCKNTAFIVPKFVIEVQ 36
>At5g50400.1 68418.m06242 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 611
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +3
Query: 183 QESDPMYEVMIGGWGNAKSVIRKNRTK--PDKVEIESPGILNGGEYRGFWVRWDSGIISA 356
Q +D + + GG N V N K + P + G ++ V W SG
Sbjct: 135 QRADFSFALFTGGLSNPTLVSVSNHVSFINPKAPVY-PRLALGKKWDEMTVTWTSGY--- 190
Query: 357 GREGEAIPFISWS 395
GEA+PF+ WS
Sbjct: 191 -NIGEAVPFVEWS 202
>At4g38770.1 68417.m05490 proline-rich family protein (PRP4) similar
to proline-rich protein [Arabidopsis thaliana]
gi|6782442|gb|AAF28388; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 448
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 358 PAEIMPLSQRTQKPRYSPPLRIP 290
P E+ P ++ P+YSPP+ +P
Sbjct: 171 PLELPPFLKKPCPPKYSPPVEVP 193
>At4g32200.1 68417.m04582 DNA-binding HORMA domain-containing
protein similar to meiotic asynaptic mutant 1
[Arabidopsis thaliana] GI:7939627, aysnaptic 1 [Brassica
oleracea var. alboglabra] GI:23506946; contains Pfam
profile PF02301: HORMA domain
Length = 1399
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 406 LSQFTTSESAQAGVPQAPGKSKMERNSILRTG*SISLDLSPLVLWNS-ITADRTTATFPS 582
L+QF + P ++ E N+ L + DL P+V WN+ ITA +T +T S
Sbjct: 662 LAQFDPLIDLEDAYNTQPQYTEAEVNARLLHEDHVEFDLVPVVSWNTEITAKKTLSTTES 721
>At1g09350.1 68414.m01046 galactinol synthase, putative contains
Pfam profile: PF01501 glycosyl transferase family 8
Length = 334
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +3
Query: 633 WENT-QSVIRYCRQKPDKVTIP 695
W +T Q I YC+Q PDKVT P
Sbjct: 145 WSHTPQYKIGYCQQCPDKVTWP 166
>At2g13620.1 68415.m01501 cation/hydrogen exchanger, putative
(CHX15) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 821
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 313 YSPPLRIPGLSISTLSGLVLFFLMTLLAFPQPPIITSYIGSDSCGPVVSAMWASFA 146
+S PL + L ++ + + FF+ L F QP +I+ +G GP V FA
Sbjct: 35 FSLPLFV--LQLTLVVVVTRFFVFILKPFRQPRVISEILGGIVLGPSVLGRSTKFA 88
>At1g49430.1 68414.m05541 long-chain-fatty-acid--CoA ligase /
long-chain acyl-CoA synthetase nearly identical to acyl
CoA synthetase (MF45P) GI:1617268 from [Brassica napus]
Length = 665
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 386 YEWNSFTLASSGDNAAIPTNPKTTIFPSVKNSG 288
+ WN F+L + D A +P KT I + SG
Sbjct: 201 FSWNEFSLMGNLDEANLPRKRKTDICTIMYTSG 233
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,674,853
Number of Sequences: 28952
Number of extensions: 392091
Number of successful extensions: 1192
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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