Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0867
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   1.4  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    23   1.9  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   3.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.6  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = -3

Query: 705 HLEVTKYFQIMYQSHV-PYLGSG-SPLI 628
           HLE+ KY+ I+Y   +  YL S  +P++
Sbjct: 323 HLEIEKYYNILYFCRIMVYLNSAINPIL 350


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 362 IFEFIDSTVGDI*KWDYKDLTKL 294
           IFE I+ T  D  K DYK L +L
Sbjct: 22  IFEEIEETFSDDTKPDYKSLQEL 44


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -1

Query: 260 TNFLILAKI*KSLELGFNSKTRICHFTRI 174
           T ++I+A    + E+GF +   I +F+RI
Sbjct: 312 TFWIIVAPAGSNFEIGFENYYNILYFSRI 340


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 637 SLDRRFYTTICRL 599
           SL R+FY TIC +
Sbjct: 307 SLKRKFYLTICTI 319


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 224 LELGFNSKTRICHFTRIGKYIRLGFGLIE 138
           L  GF       H +RI + I+LG G+ E
Sbjct: 661 LSSGFTLDEPQVHASRIYRMIKLGLGIDE 689


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 432 IYGNVEDIPHT 400
           ++G VE +PHT
Sbjct: 72  VFGKVEPVPHT 82


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/47 (23%), Positives = 20/47 (42%)
 Frame = -1

Query: 554 MFCLLQFVITAITIYSPLITFSLVVLLFHWID*CLSTVCCVYMETLR 414
           +FC   ++ T   IY  +   S++   +      + T  C+Y   LR
Sbjct: 146 VFCYFIYLFTVYYIYYSVHEASIINFGYTLAKFMIFTSTCIYTNLLR 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,190
Number of Sequences: 336
Number of extensions: 3664
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)