Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0865
         (408 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   2.0  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   2.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   2.7  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   3.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   4.6  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   6.1  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 343 PVPYPVEKHVPYPVKVAVPQP 405
           PVP PVE+    P     P P
Sbjct: 392 PVPQPVEEVTQKPSSTKAPAP 412


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 281 PTSPRPSPSSKASLYLTPSTD 343
           PT+P P+PS      LTPS D
Sbjct: 95  PTTP-PTPSPPPEERLTPSKD 114



 Score = 21.8 bits (44), Expect = 2.7
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 275 DIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR 388
           +IP+  R SP     + ++P+T P  +      L PS+
Sbjct: 76  EIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTPSK 113


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 136 RGLLNLGYGYGIDGLDVGYIGHGQGLGGA 222
           +  LNL   +G DG D+ +   GQ  G A
Sbjct: 127 KSALNLVQKWGFDGFDLDWEYPGQRGGAA 155


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 142 LLNLGYGYGIDGLDVGYIGHG 204
           LL LGY   +   D  Y+ HG
Sbjct: 472 LLELGYRIIVSTKDAWYLDHG 492


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 166 RIHTRGSGDHVCPI 125
           R HT  SGD  C +
Sbjct: 453 RYHTSASGDEACSL 466


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 22  GIMKTALCLVFLLV 63
           GIM + L L+FLL+
Sbjct: 99  GIMNSTLNLIFLLI 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,864
Number of Sequences: 336
Number of extensions: 1543
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)