Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0865
(408 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g05510.1 68415.m00583 glycine-rich protein 35 0.024
At1g61255.1 68414.m06903 expressed protein 35 0.024
At1g27710.1 68414.m03387 glycine-rich protein 33 0.056
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 33 0.074
At2g15780.1 68415.m01809 glycine-rich protein similar to Blue co... 33 0.097
At5g61660.1 68418.m07736 glycine-rich protein 32 0.13
At5g46730.1 68418.m05757 glycine-rich protein 32 0.17
At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing ... 32 0.17
At2g05440.2 68415.m00575 glycine-rich protein 32 0.17
At5g58470.2 68418.m07323 zinc finger (Ran-binding) family protei... 31 0.22
At5g58470.1 68418.m07322 zinc finger (Ran-binding) family protei... 31 0.22
At2g05530.1 68415.m00585 glycine-rich protein 31 0.22
At4g39260.1 68417.m05557 glycine-rich RNA-binding protein 8 (GRP... 31 0.30
At1g11850.2 68414.m01364 expressed protein 31 0.39
At5g66400.1 68418.m08374 dehydrin (RAB18) nearly identical to SP... 30 0.52
At4g29240.1 68417.m04182 leucine-rich repeat family protein / ex... 30 0.52
At1g76460.1 68414.m08893 RNA recognition motif (RRM)-containing ... 30 0.52
At1g11850.1 68414.m01363 expressed protein 30 0.52
At3g15400.1 68416.m01954 anther development protein, putative si... 29 0.91
At2g05520.1 68415.m00584 glycine-rich protein (GRP) identical to... 29 0.91
At4g30460.1 68417.m04325 glycine-rich protein 29 1.2
At4g29030.1 68417.m04151 glycine-rich protein glycine-rich prote... 29 1.2
At3g13224.2 68416.m01658 RNA recognition motif (RRM)-containing ... 29 1.2
At2g05440.1 68415.m00574 glycine-rich protein 29 1.2
At1g74230.1 68414.m08597 glycine-rich RNA-binding protein simila... 29 1.2
At5g58040.1 68418.m07263 fip1 motif-containing protein contains ... 29 1.6
At4g10330.1 68417.m01698 glycine-rich protein 29 1.6
At3g07810.2 68416.m00956 heterogeneous nuclear ribonucleoprotein... 29 1.6
At3g07810.1 68416.m00955 heterogeneous nuclear ribonucleoprotein... 29 1.6
At2g42520.1 68415.m05262 DEAD box RNA helicase, putative similar... 29 1.6
At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial... 29 1.6
At5g61030.1 68418.m07659 RNA-binding protein, putative similar t... 28 2.1
At4g39260.4 68417.m05560 glycine-rich RNA-binding protein 8 (GRP... 28 2.1
At4g21620.1 68417.m03134 glycine-rich protein 28 2.1
At1g66820.1 68414.m07595 glycine-rich protein 28 2.1
At1g47655.1 68414.m05294 Dof-type zinc finger domain-containing ... 28 2.1
At1g04800.1 68414.m00476 glycine-rich protein 28 2.1
At4g38680.1 68417.m05477 cold-shock DNA-binding family protein c... 28 2.8
At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kina... 28 2.8
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 27 3.7
At3g24760.1 68416.m03108 F-box family protein ; similar to SKP... 27 3.7
At3g07560.1 68416.m00903 glycine-rich protein 27 3.7
At2g04190.1 68415.m00404 meprin and TRAF homology domain-contain... 27 3.7
At1g20790.1 68414.m02603 F-box family protein contains Pfam:PF00... 27 3.7
At1g17640.1 68414.m02183 RNA recognition motif (RRM)-containing ... 27 3.7
At5g04360.1 68418.m00428 pullulanase, putative / starch debranch... 27 4.8
At4g19070.1 68417.m02810 cadmium-responsive protein / cadmium in... 27 4.8
At3g58570.1 68416.m06528 DEAD box RNA helicase, putative similar... 27 4.8
At2g40890.1 68415.m05046 cytochrome P450 98A3, putative (CYP98A3... 27 4.8
At2g21660.1 68415.m02577 glycine-rich RNA-binding protein (GRP7)... 27 4.8
At2g05540.1 68415.m00586 glycine-rich protein 27 4.8
At1g23720.1 68414.m02994 proline-rich extensin-like family prote... 27 4.8
At4g32920.1 68417.m04685 glycine-rich protein 27 6.4
At4g22030.1 68417.m03187 F-box family protein PF0064: F-box doma... 27 6.4
At4g14300.1 68417.m02203 heterogeneous nuclear ribonucleoprotein... 27 6.4
At2g48020.2 68415.m06011 sugar transporter, putative similar to ... 27 6.4
At2g48020.1 68415.m06010 sugar transporter, putative similar to ... 27 6.4
At2g33410.1 68415.m04095 heterogeneous nuclear ribonucleoprotein... 27 6.4
At2g05380.1 68415.m00566 glycine-rich protein (GRP3S) identical ... 27 6.4
At1g32760.1 68414.m04039 glutaredoxin family protein contains Pf... 27 6.4
At1g01060.2 68414.m00007 myb family transcription factor contain... 27 6.4
At1g01060.1 68414.m00006 myb family transcription factor contain... 27 6.4
At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containi... 26 8.5
At2g21660.2 68415.m02578 glycine-rich RNA-binding protein (GRP7)... 26 8.5
At1g22790.1 68414.m02847 expressed protein identical to hypothet... 26 8.5
>At2g05510.1 68415.m00583 glycine-rich protein
Length = 127
Score = 34.7 bits (76), Expect = 0.024
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +1
Query: 148 NLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 279
N G G+G+DG G+ GH G GG Y GG+ G GGH
Sbjct: 67 NGGGGHGLDGYGGGHGGHYGGGGGHYG-GGGGHGGGGHYGGGGH 109
Score = 29.9 bits (64), Expect = 0.69
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 279
G+G G G G+G G GG Y G Y G G GGH
Sbjct: 62 GHGGHNGGGGHGLDGYGGGHGGHYGGGGGHYGGGGGHGGGGH 103
Score = 26.6 bits (56), Expect = 6.4
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +1
Query: 160 GYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 279
G+G G Y G G G GG +N G GYG GGH
Sbjct: 46 GHGGHGGGGHYGGGGHGHGG-HNGGGGHGLDGYGGGHGGH 84
>At1g61255.1 68414.m06903 expressed protein
Length = 143
Score = 34.7 bits (76), Expect = 0.024
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +1
Query: 148 NLGYGYG-IDGLDV----GYIGHGQGLGGAYNYVDGGYSSGYGL 264
N GYG G GL G+I G G GG+Y+ + GGYS G G+
Sbjct: 48 NKGYGSGGYPGLTTEPATGFILPGSGPGGSYSELSGGYSKGRGV 91
>At1g27710.1 68414.m03387 glycine-rich protein
Length = 212
Score = 33.5 bits (73), Expect = 0.056
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +1
Query: 136 RGLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
+G L G GYG G G G+G G GG + GG+ G G GG
Sbjct: 99 KGELTAG-GYGGGGPGYGGGGYGPGGGGGGVVIGGGFGGGAGYGSGG 144
Score = 26.6 bits (56), Expect = 6.4
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
G G I G G G+G G G ++ +GG GYG GG
Sbjct: 125 GGGVVIGGGFGGGAGYGSGGGLGWDGGNGGGGPGYGSGGGG 165
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 33.1 bits (72), Expect = 0.074
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 281 PTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNP 406
P +P PSP S + + +PS P HT S PS P P
Sbjct: 204 PATPSPSPKSPSPVSHSPSHSPAHTPSHSPAHTPSHSPAHAP 245
Score = 26.6 bits (56), Expect = 6.4
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +2
Query: 281 PTSPRP-SPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNP 406
P SP P S S S TPS P HT S PS P P
Sbjct: 211 PKSPSPVSHSPSHSPAHTPSHSPAHTPSHSPAHAPSHSPAHAP 253
>At2g15780.1 68415.m01809 glycine-rich protein similar to Blue
copper protein precursor (SP:Q41001) {Pisum sativum};
contains a Pfam PF02298: Plastocyanin-like domain
related to blue copper-binding protein; contains a
domain related to blue copper-binding protein
Length = 257
Score = 32.7 bits (71), Expect = 0.097
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +1
Query: 154 GYGYGIDGL-----DVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHT 282
G+G+G G+ G G G G+G NY G SG G +GGH+
Sbjct: 84 GWGWGWGGVPNNTHSSGSGGSGWGMGPNNNYSSGSGGSGSGWGYGGHS 131
>At5g61660.1 68418.m07736 glycine-rich protein
Length = 134
Score = 32.3 bits (70), Expect = 0.13
Identities = 22/46 (47%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +1
Query: 154 GYGYGI-DGLDVGYIGHGQGLGGA----YNYVDGGYSSGYGLNFGG 276
GYGYG G GY G+G G GGA Y Y G SG G GG
Sbjct: 74 GYGYGSGSGSGTGY-GYGSGGGGARGGGYGYGSGNGRSGGGGGGGG 118
>At5g46730.1 68418.m05757 glycine-rich protein
Length = 290
Score = 31.9 bits (69), Expect = 0.17
Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 154 GYGYGIDGL-DVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
GYG G +G G GHG G GGA + GGY+SG G GG
Sbjct: 72 GYG-GAEGYASGGGSGHGGGGGGAAS--SGGYASGAGEGGGG 110
Score = 31.9 bits (69), Expect = 0.17
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 279
GYG G G G G G+G GG+Y GG S G GGH
Sbjct: 242 GYGGGAAGGYGGGGGGGEGGGGSYGGEHGGGSGGGHGGGGGH 283
Score = 30.7 bits (66), Expect = 0.39
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +1
Query: 139 GLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
G+ + GYG G G G G G+G GG Y + GY+SG G GG
Sbjct: 47 GVSSGGYG-GESGGGYGG-GSGEGAGGGYGGAE-GYASGGGSGHGG 89
Score = 30.3 bits (65), Expect = 0.52
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
G YG G G G G G GG Y GG + GYG GG
Sbjct: 220 GGAYGGGGAHGGGYGSGGGEGGGYG---GGAAGGYGGGGGG 257
Score = 28.7 bits (61), Expect = 1.6
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGG-YSSGYGLNFG 273
GYG G G G G G G GG Y GG ++SGYG G
Sbjct: 111 GYG-GAAGGHAGGGGGGSGGGGGSAYGAGGEHASGYGNGAG 150
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +1
Query: 154 GYGYGIDGLDVGYI-GHGQGLGGAYNYVDGGYSSGYGLNFGG 276
G G G GY G G+G GG Y GG++ G G GG
Sbjct: 88 GGGGGGAASSGGYASGAGEGGGGGYGGAAGGHAGGGGGGSGG 129
Score = 27.5 bits (58), Expect = 3.7
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +1
Query: 136 RGLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
R LLN G G G G G GG GGY G G GG
Sbjct: 25 RNLLNYGQASGGGGHGGGGGSGGVSSGGYGGESGGGYGGGSGEGAGG 71
>At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing
protein ribonucleoprotein, Xenopus laevis, PIR:S40778;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 423
Score = 31.9 bits (69), Expect = 0.17
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +1
Query: 154 GYGYGIDGLD----VGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
GYG G+ +GY G G GG YN GGYS G G +GG
Sbjct: 279 GYGGGVGPYRGEPALGYSGRYGGGGGGYNR--GGYSMGGGGGYGG 321
Score = 31.1 bits (67), Expect = 0.30
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
G GYG G+ G+G G+GGA GGY G G + GG
Sbjct: 346 GGGYGSSGIG----GYGGGMGGAGG---GGYRGGGGYDMGG 379
Score = 30.7 bits (66), Expect = 0.39
Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 148 NLGYGYGIDGLDVGYIGHGQGLGGAYNY---VDGGYSSGYGLNFGG 276
N G GYG DG G+ G G GG Y GG S GYG +GG
Sbjct: 227 NFGGGYG-DGYGGGHGGGYGGPGGPYKSGGGYGGGRSGGYG-GYGG 270
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 279
GYG G+ G G G+ G G V GG + GYG GG+
Sbjct: 356 GYGGGMGGAGGG--GYRGGGGYDMGGVGGGGAGGYGAGGGGN 395
Score = 27.5 bits (58), Expect = 3.7
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGH-GQGLGGAYNYVDGGYSS----GYGLNFGG 276
GYG G + G G G G GG GGY S GYG GG
Sbjct: 318 GYGGGPGDMYGGSYGEPGGGYGGPSGSYGGGYGSSGIGGYGGGMGG 363
Score = 27.1 bits (57), Expect = 4.8
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +1
Query: 136 RGLLNLGYGYGIDGLDVGYIGHGQGL-GGAYNYVDGGYSSGYGLN-FGGH 279
RG ++G G G G G G GG Y G Y GYG + GG+
Sbjct: 308 RGGYSMGGGGGYGGGPGDMYGGSYGEPGGGYGGPSGSYGGGYGSSGIGGY 357
Score = 27.1 bits (57), Expect = 4.8
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 154 GYGY-GIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
G GY G G D+G G G GGA Y GG +G G +GG
Sbjct: 366 GGGYRGGGGYDMG----GVGGGGAGGYGAGGGGNGGGSFYGG 403
>At2g05440.2 68415.m00575 glycine-rich protein
Length = 154
Score = 31.9 bits (69), Expect = 0.17
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHTDVTKTITLVKGV 318
G YG G G G G G GG Y GGY G G + GG + + + GV
Sbjct: 100 GGHYGGGGGHYGGGGGGHGGGGHYGGGGGGYGGGGGHHGGGGHGLNEPVQTKPGV 154
Score = 27.5 bits (58), Expect = 3.7
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +1
Query: 148 NLGYGYGIDGLDVG---YIGHG--QGLGGAYNYVDGGYSSGYGLNFGG 276
N G G+G+DG G Y G G G GG + GG+ G G ++GG
Sbjct: 65 NGGGGHGLDGYGGGGGHYGGGGGHYGGGGGHYGGGGGHYGGGGGHYGG 112
>At5g58470.2 68418.m07323 zinc finger (Ran-binding) family protein
weak similarity to SP|Q01844 RNA-binding protein EWS
(EWS oncogene) (Ewing sarcoma breakpoint region 1
protein) {Homo sapiens}; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00641: Zn-finger in Ran binding protein and others
Length = 422
Score = 31.5 bits (68), Expect = 0.22
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGL-NFGG 276
G G G G D GY G G GG+Y GGY G G N GG
Sbjct: 24 GGGGGYGGGDAGYGGRGASGGGSYG-GRGGYGGGGGRGNRGG 64
Score = 26.2 bits (55), Expect = 8.5
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +1
Query: 190 YIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
Y G G G GG Y D GY G G + GG
Sbjct: 18 YGGDGYGGGGGYGGGDAGY-GGRGASGGG 45
>At5g58470.1 68418.m07322 zinc finger (Ran-binding) family protein
weak similarity to SP|Q01844 RNA-binding protein EWS
(EWS oncogene) (Ewing sarcoma breakpoint region 1
protein) {Homo sapiens}; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00641: Zn-finger in Ran binding protein and others
Length = 422
Score = 31.5 bits (68), Expect = 0.22
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGL-NFGG 276
G G G G D GY G G GG+Y GGY G G N GG
Sbjct: 24 GGGGGYGGGDAGYGGRGASGGGSYG-GRGGYGGGGGRGNRGG 64
Score = 26.2 bits (55), Expect = 8.5
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +1
Query: 190 YIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
Y G G G GG Y D GY G G + GG
Sbjct: 18 YGGDGYGGGGGYGGGDAGY-GGRGASGGG 45
>At2g05530.1 68415.m00585 glycine-rich protein
Length = 115
Score = 31.5 bits (68), Expect = 0.22
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +1
Query: 160 GYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 279
G+G +G GY G G G G + GGY+ G G N GGH
Sbjct: 44 GHGGNG---GYNGGG-GYNGGGGHNGGGYNGGGGYNGGGH 79
>At4g39260.1 68417.m05557 glycine-rich RNA-binding protein 8 (GRP8)
(CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8
(CCR1 protein) (GRP8) {Arabidopsis thaliana} isoform
contains a non-consensus CG acceptor splice site at
intron 2
Length = 169
Score = 31.1 bits (67), Expect = 0.30
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYG 261
GYG G G GY G G+ GG Y DGG G G
Sbjct: 131 GYGSGGGGGGRGYGGGGRREGGGYGGGDGGSYGGGG 166
Score = 30.3 bits (65), Expect = 0.52
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
GY G G G G+G GG GGY G G ++GG
Sbjct: 124 GYERRSGGYGSGGGGGGRGYGGGGRREGGGYGGGDGGSYGG 164
Score = 26.6 bits (56), Expect = 6.4
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYG 261
G G G G G G+ G GG Y GGY SG G
Sbjct: 104 GGGGGYSGGGGG--GYSGGGGGGYERRSGGYGSGGG 137
>At1g11850.2 68414.m01364 expressed protein
Length = 108
Score = 30.7 bits (66), Expect = 0.39
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +1
Query: 139 GLLNLGYGYGID---GLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
GL LG G GI GL +G G G G GG GG+ G G GG
Sbjct: 58 GLGGLGIGAGIGAGAGLGLGGGGGGLGGGGGGLLGGGGFGGGAGGGLGG 106
>At5g66400.1 68418.m08374 dehydrin (RAB18) nearly identical to
SP|P30185 Dehydrin Rab18 {Arabidopsis thaliana}
Length = 186
Score = 30.3 bits (65), Expect = 0.52
Identities = 22/62 (35%), Positives = 28/62 (45%)
Frame = +1
Query: 112 PLEKKLDKRGLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHTDVT 291
P++++ D+ G G GYG G G G G GG Y GG GYG G+ T
Sbjct: 19 PIQQQYDEYGNPMGGGGYGTGGGGGATGGQGYGTGG-QGYGSGG--QGYGTGGQGYGTGT 75
Query: 292 KT 297
T
Sbjct: 76 GT 77
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFG 273
G GYG G G G G G GG Y G + G+G G
Sbjct: 47 GQGYGTGGQGYGSGGQGYGTGG-QGYGTGTGTEGFGTGGG 85
>At4g29240.1 68417.m04182 leucine-rich repeat family protein /
extensin family protein contains Pfam PF00560: Leucine
Rich Repeat domains; similar to leucine-rich
repeat/extensin 1 (GI:13809918) [Arabidopsis thaliana]
Length = 415
Score = 30.3 bits (65), Expect = 0.52
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 139 GLLNLGYGYGIDG-LDVGYIGHGQGLGGAYNYVDGGYSSGYGLN 267
GL+ +G+ G + VG IG G G GG +V GGY++G N
Sbjct: 22 GLVQTDASFGVGGGVGVG-IGGGGGGGGGGVWVGGGYNNGGNRN 64
>At1g76460.1 68414.m08893 RNA recognition motif (RRM)-containing
protein low similarity to RRM-containing protein SEB-4
[Xenopus laevis] GI:8895698; contains Pfam profile:
PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP
domain)
Length = 285
Score = 30.3 bits (65), Expect = 0.52
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +1
Query: 214 GGAYNYVDGGYSSG-YGLNFGGHTDVTKTITLVKGVPVPYAVDRPVPYPVEKHV 372
G Y V G G + L GG T T T + + + PY P P PV+ H+
Sbjct: 212 GHGYTAVQGYSVPGSHILQLGGPTVSTMTTSSMPALQAPYPSGIPGPAPVQSHI 265
>At1g11850.1 68414.m01363 expressed protein
Length = 93
Score = 30.3 bits (65), Expect = 0.52
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = +1
Query: 145 LNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
L LG G G+ GL IG G G G GG+ G G GG
Sbjct: 51 LGLGGGAGLGGLG---IGAGIGAGAGLGLGGGGFGGGAGGGLGG 91
>At3g15400.1 68416.m01954 anther development protein, putative
similar to anther development protein ATA20 GB:AAC50042
GI:2708813 from [Arabidopsis thaliana]
Length = 416
Score = 29.5 bits (63), Expect = 0.91
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = +1
Query: 151 LGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFG 273
+G GYG G VGY G G G G + +G SSG G FG
Sbjct: 207 VGRGYGSGGSGVGY-GVGIGSSGGSGFGEGIGSSG-GNGFG 245
Score = 26.6 bits (56), Expect = 6.4
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 151 LGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFG 273
+GYG GI G G G G + +G SSG G FG
Sbjct: 218 VGYGVGIGSSGGSGFGEGIGSSGGNGFGEGIGSSG-GSGFG 257
>At2g05520.1 68415.m00584 glycine-rich protein (GRP) identical to
glycine-rich protein; atGRP (GI:259447) [Arabidopsis
thaliana]
Length = 145
Score = 29.5 bits (63), Expect = 0.91
Identities = 20/51 (39%), Positives = 23/51 (45%)
Frame = +1
Query: 124 KLDKRGLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
K D+RG + G Y G G G+ QG GG Y G Y G G GG
Sbjct: 38 KPDQRGYGDNGGNYNNGGGYQGGGGNYQGGGGNYQGGGGNYQGGGGRYQGG 88
>At4g30460.1 68417.m04325 glycine-rich protein
Length = 162
Score = 29.1 bits (62), Expect = 1.2
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHTD 285
G G+G G G G G G G Y +GG GYG +GG D
Sbjct: 122 GGGHGGGGGGGGGRGGGGGSGNGEGYGEGG---GYGGGYGGGDD 162
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 175 GLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
GLD+G IG G G+G G +G G GG
Sbjct: 34 GLDLGGIGAGIGIGIGIGGGGSGSGAGAGSGSGG 67
>At4g29030.1 68417.m04151 glycine-rich protein glycine-rich protein
- Onobrychis viciifolia,PID:g2565429
Length = 115
Score = 29.1 bits (62), Expect = 1.2
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 154 GYGYGIDGL--DVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHTDV 288
G G G+ G ++GY G G GG + GG SG G GG + +
Sbjct: 54 GVGGGVSGPGGNLGYGGFGGAGGGLGGGLGGGAGSGLGGGLGGGSGI 100
>At3g13224.2 68416.m01658 RNA recognition motif (RRM)-containing
protein contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 358
Score = 29.1 bits (62), Expect = 1.2
Identities = 22/47 (46%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Frame = +1
Query: 154 GYGYGIDGLDVG--YIGHGQG-LGGAYNYVDGGYSS---GYGLNFGG 276
GYG G G + G Y +G G LGG N GYSS YG FGG
Sbjct: 247 GYGRGSVGPEFGGGYNNYGGGSLGGYRNEPPLGYSSRFGPYGSGFGG 293
Score = 27.1 bits (57), Expect = 4.8
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 151 LGYG--YGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
LGY +G G G G+G+G GAY G GYG +GG
Sbjct: 278 LGYSSRFGPYGSGFGGEGYGRGGEGAYLGYPRGGGEGYG-GYGG 320
>At2g05440.1 68415.m00574 glycine-rich protein
Length = 127
Score = 29.1 bits (62), Expect = 1.2
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +1
Query: 160 GYGIDGLDV-GYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHTDVTKTITLVKGV 318
GYG G G GH G GG Y GGY G G + GG + + + GV
Sbjct: 74 GYGGGGGHYGGGGGHYGGGGGHYGGGGGGYGGGGGHHGGGGHGLNEPVQTKPGV 127
Score = 28.7 bits (61), Expect = 1.6
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +1
Query: 148 NLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSG---YGLNFGGH 279
N G G+G+DG G GH G GG Y G Y G YG GGH
Sbjct: 65 NGGGGHGLDGYGGGG-GHYGGGGGHYGGGGGHYGGGGGGYGGG-GGH 109
>At1g74230.1 68414.m08597 glycine-rich RNA-binding protein similar
to RNA-binding protein GB:S46286 from [Nicotiana
sylvestris]
Length = 289
Score = 29.1 bits (62), Expect = 1.2
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 148 NLGYGYGIDGLDVGYIGHGQGLGGAYNYVDG--GYSSGYGLNFGG 276
N G G G G + Y G+ G GG Y G GYG NFGG
Sbjct: 158 NAGGGGGYGG-NSSYGGNAGGYGGNPPYSGNAVGGGGGYGSNFGG 201
Score = 28.3 bits (60), Expect = 2.1
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Frame = +1
Query: 187 GYIGHG-QGLGGAYNYVDGGY---SSGYGLNFGGH 279
G+ G G G GG Y DGGY + GYG GG+
Sbjct: 115 GFGGRGFGGPGGGYGASDGGYGAPAGGYGGGAGGY 149
>At5g58040.1 68418.m07263 fip1 motif-containing protein contains
Pfam profile PF05182: Fip1 motif
Length = 1192
Score = 28.7 bits (61), Expect = 1.6
Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +1
Query: 172 DGLDVGYIGHGQGLGGAYNYVDGGYSS-GY 258
DG D G G G G GGA GYSS GY
Sbjct: 219 DGKDGGEAGKGSGPGGATGPPKAGYSSHGY 248
>At4g10330.1 68417.m01698 glycine-rich protein
Length = 130
Score = 28.7 bits (61), Expect = 1.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 145 LNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFG 273
L +G G+G +G +G G G+ G + G G G+ FG
Sbjct: 35 LGVGCGFGFGAGLIGGVGFGPGVPGLQFGLGFGAGCGIGVGFG 77
Score = 28.7 bits (61), Expect = 1.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 151 LGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSG 255
LG+G G G+ VG+ G+G G G AY++ Y+ G
Sbjct: 64 LGFGAGC-GIGVGF-GYGVGRGAAYDHSRSYYNVG 96
>At3g07810.2 68416.m00956 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative contains Pfam profile:
PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP
domain)
Length = 495
Score = 28.7 bits (61), Expect = 1.6
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Frame = +1
Query: 142 LLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGG------YSSGYGLN 267
LLN GY G + VG G+G + G ++ V G YSSGYG+N
Sbjct: 211 LLN-GYAQGFNPAAVG--GYGLRMDGRFSPVGAGRSGFANYSSGYGMN 255
>At3g07810.1 68416.m00955 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative contains Pfam profile:
PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP
domain)
Length = 494
Score = 28.7 bits (61), Expect = 1.6
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Frame = +1
Query: 142 LLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGG------YSSGYGLN 267
LLN GY G + VG G+G + G ++ V G YSSGYG+N
Sbjct: 211 LLN-GYAQGFNPAAVG--GYGLRMDGRFSPVGAGRSGFANYSSGYGMN 255
>At2g42520.1 68415.m05262 DEAD box RNA helicase, putative similar to
SP|O00571 DEAD-box protein 3 (Helicase-like protein 2)
{Homo sapiens}, DEAD box RNA helicase DDX3 [Homo
sapiens] GI:3523150; contains Pfam profiles PF00270:
DEAD/DEAH box helicase, PF00271: Helicase conserved
C-terminal domain
Length = 633
Score = 28.7 bits (61), Expect = 1.6
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 148 NLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGG-YSSGY-GLNFGGH 279
+ G G G G G G G G GG Y GG Y GY G + GG+
Sbjct: 579 SFGSGRGGYGGGGGGYGGGGGYGGGGGYGGGGGYGGGYGGASSGGY 624
>At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial,
putative very strong similarity to SP|P23413 ATP
synthase alpha chain, mitochondrial (EC 3.6.3.14)
{Brassica campestris}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF00306: ATP synthase ab C terminal, PF02874:
ATP synthase alpha/beta family beta-barrel domain
Length = 777
Score = 28.7 bits (61), Expect = 1.6
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +1
Query: 247 SSGYGLNFGGHTDVTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVP 399
S G G D + ++L P P + PVP+P E P PV P
Sbjct: 128 SGGNGWTESAANDPAREVSLA---PFPLQLTHPVPFPAEPGSPDPVSPPPP 175
>At5g61030.1 68418.m07659 RNA-binding protein, putative similar to
RNA-binding protein from [Solanum tuberosum]
GI:15822705, [Nicotiana tabacum] GI:15822703, [Nicotiana
sylvestris] GI:624925; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 309
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +1
Query: 160 GYGIDGLDVGYIGHGQGLGGAYNYVDGGY--SSGYGLNFGGH 279
G G G G G G G G Y GGY S GYG GG+
Sbjct: 122 GGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGY 163
Score = 28.3 bits (60), Expect = 2.1
Identities = 22/45 (48%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNY-VDGGY---SSGYGLNFGG 276
G GYG G GY G G GGA Y GGY + GYG N GG
Sbjct: 127 GGGYGGGG--GGYGGSGGYGGGAGGYGGSGGYGGGAGGYGGNSGG 169
Score = 28.3 bits (60), Expect = 2.1
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
GYG G G G G+G G GG GGY +GG
Sbjct: 142 GYGGGAGGYG-GSGGYGGGAGGYGGNSGGGYGGNAAGGYGG 181
Score = 27.9 bits (59), Expect = 2.8
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNY--VDGGYSSGYGLNFGGH 279
G GYG G GY G G GG+ Y GGY G +GG+
Sbjct: 134 GGGYGGSG---GYGGGAGGYGGSGGYGGGAGGYGGNSGGGYGGN 174
>At4g39260.4 68417.m05560 glycine-rich RNA-binding protein 8 (GRP8)
(CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8
(CCR1 protein) (GRP8) {Arabidopsis thaliana} isoform
contains a non-consensus CG acceptor splice site at
intron 2
Length = 105
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 196 GHGQGLGGAYNYVDGGYSSGYGLNFGG 276
G G+G GG GGY G G ++GG
Sbjct: 74 GGGRGYGGGGRREGGGYGGGDGGSYGG 100
>At4g21620.1 68417.m03134 glycine-rich protein
Length = 131
Score = 28.3 bits (60), Expect = 2.1
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 118 EKKLDKRGLLNLGYGYGIDGLDVGYI-GHGQGLGGAYNYVDGGYSSGYGLNFGG 276
E K G LG+G G+ G G+I G G G G V GGY G+G GG
Sbjct: 21 ESARQKSGNDGLGFG-GVPGS--GFIPGFGNGFPGTG--VGGGYGGGFGGPSGG 69
>At1g66820.1 68414.m07595 glycine-rich protein
Length = 109
Score = 28.3 bits (60), Expect = 2.1
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 151 LGYGYGIDGLDVGYIGHGQGLGGAYNYVD 237
LG+G G G+ G+ G+G G+GG Y++ D
Sbjct: 76 LGFGIGC-GIGFGF-GYGFGVGGGYSFDD 102
>At1g47655.1 68414.m05294 Dof-type zinc finger domain-containing
protein
Length = 209
Score = 28.3 bits (60), Expect = 2.1
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIG 198
GYGYG++ + +GY+G
Sbjct: 148 GYGYGLEEMSIGYLG 162
>At1g04800.1 68414.m00476 glycine-rich protein
Length = 200
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSG 255
G+G GI G G+ G G G GGA VDGG+ G
Sbjct: 81 GFGGGIGG---GFGGGGFG-GGAGKGVDGGFGKG 110
Score = 27.1 bits (57), Expect = 4.8
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGL-GGAYNYVDGGYSSGYGLNFGGHTD 285
G G G+DG G G+G+ GGA VDGG G+ G D
Sbjct: 98 GAGKGVDG------GFGKGVDGGAGKGVDGGAGKGFDGGVGKGVD 136
>At4g38680.1 68417.m05477 cold-shock DNA-binding family protein
contains Pfam domains PF00313: 'Cold-shock' DNA-binding
domain and PF00098: Zinc knuckle
Length = 203
Score = 27.9 bits (59), Expect = 2.8
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 279
G GYG G GY G G G GG GG S Y GH
Sbjct: 155 GGGYGGGG---GYGGGGGGYGGGGRGGGGGGGSCYSCGESGH 193
>At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 769
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 124 KLDKRGLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSG 255
K+ RG+++ G +G + + HG G+ Y Y DGG+ G
Sbjct: 139 KMSGRGVMSWANGDLFNGFWLNGLRHGSGV---YKYADGGFYFG 179
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 27.5 bits (58), Expect = 3.7
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 310 KGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQP 405
K PVP +PVP P K VP P +VP P
Sbjct: 35 KHKPVPSPKPKPVPSPKPKPVPSP---SVPSP 63
>At3g24760.1 68416.m03108 F-box family protein ; similar to SKP1
interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 383
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +2
Query: 278 IPTSPRPSPSSKASLYL--TPSTDPFHTQ 358
+P SP PSPSS L+L +T FH Q
Sbjct: 50 LPPSPSPSPSSPPWLFLFGIHNTSSFHNQ 78
>At3g07560.1 68416.m00903 glycine-rich protein
Length = 304
Score = 27.5 bits (58), Expect = 3.7
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 160 GYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFG 273
GYG GL +G G G Y GGY G G G
Sbjct: 128 GYGGGGLYGSSGMYGGGAMGGYGGTMGGYGMGMGTGMG 165
Score = 27.1 bits (57), Expect = 4.8
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +1
Query: 157 YGYGIDGLDVGYIGH--GQGLGGAYNYVDGGYSSGYGLNFGGH 279
YG G+ G Y G G GL G+ GG GYG GG+
Sbjct: 114 YGGGMYGGSSMYRGGYGGGGLYGSSGMYGGGAMGGYGGTMGGY 156
>At2g04190.1 68415.m00404 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 411
Score = 27.5 bits (58), Expect = 3.7
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG--H-TDVTKTI 300
G G+ G G G+G G G Y GG GYG GG H +VT+T+
Sbjct: 64 GPGFFFGGAGPGP-GYGGGGGHGPGYGGGGDGRGYGSETGGGNHGPEVTRTL 114
>At1g20790.1 68414.m02603 F-box family protein contains Pfam:PF00646
F-box domain
Length = 435
Score = 27.5 bits (58), Expect = 3.7
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +1
Query: 316 VPVPYAVDRPVPYPVEKHVPYPVKVAVPQP 405
+P+P + P+P + H+ P+ +A+P P
Sbjct: 355 MPMPMPMPMPMPMHMHMHMHMPMPMAMPMP 384
Score = 26.6 bits (56), Expect = 6.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 316 VPVPYAVDRPVPYPVEKHVPYPVKVAVPQP 405
+P+P A+ P+P P+ +P P+ + +P P
Sbjct: 375 MPMPMAM--PMPMPIAMAMPMPMPMPMPMP 402
>At1g17640.1 68414.m02183 RNA recognition motif (RRM)-containing
protein similar to GB:L02953 from [Xenopus laevis]
(Nucleic Acids Res. 21, 999-1006 (1993)); contains
InterPro entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM)
Length = 369
Score = 27.5 bits (58), Expect = 3.7
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
GYGYG ++GY G GG Y+++ GY +GG
Sbjct: 303 GYGYGGQMFNMGY-----GAGG-YSHMGSGYGVAAAAAYGG 337
Score = 26.6 bits (56), Expect = 6.4
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 187 GYIGHGQGLGGAYNYVDGGYSSGYGLNFGGH 279
G+ G+G G G Y Y ++ GYG H
Sbjct: 292 GFYGYGGGYGYGYGYGGQMFNMGYGAGGYSH 322
>At5g04360.1 68418.m00428 pullulanase, putative / starch debranching
enzyme, putative similar to pullulanase [Spinacia
oleracea] GI:634093 (EC 3.2.1.41); contains Pfam
profiles PF00128: Alpha amylase catalytic domain,
PF02922: Isoamylase N-terminal domain
Length = 965
Score = 27.1 bits (57), Expect = 4.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -1
Query: 378 IRHVLLNWVWNGSVDGVRY 322
IR LLNWV N VDG R+
Sbjct: 533 IRDDLLNWVVNYKVDGFRF 551
>At4g19070.1 68417.m02810 cadmium-responsive protein / cadmium
induced protein (AS8) identical to cadmium induced
protein AS8 SP:P42735 from [Arabidopsis thaliana]
Length = 171
Score = 27.1 bits (57), Expect = 4.8
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 151 LGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNF 270
+G+G G +GY+G G G+G + G G NF
Sbjct: 37 VGWGPGFGPEVIGYVGAGCGVGFSVGITLAGLGIGLPTNF 76
>At3g58570.1 68416.m06528 DEAD box RNA helicase, putative similar to
SP|O00571 DEAD-box protein 3 (Helicase-like protein 2)
{Homo sapiens}, DEAD box RNA helicase DDX3 [Homo
sapiens] GI:3523150; contains Pfam profiles PF00270:
DEAD/DEAH box helicase, PF00271: Helicase conserved
C-terminal domain
Length = 646
Score = 27.1 bits (57), Expect = 4.8
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 154 GYGYGIDGLDVGYI--GHGQGLGGAYNYVDGGYSSGYGLNFGGH 279
GYG G+ G G + G+G GG Y V GG + YG G +
Sbjct: 581 GYG-GVPGGGYGAMPGGYGPVPGGGYGNVPGGGYAPYGRGGGAY 623
>At2g40890.1 68415.m05046 cytochrome P450 98A3, putative (CYP98A3)
identical to Cytochrome P450 98A3 (SP|O22203)
[Arabidopsis thaliana]; similar to gi:17978651 from
Pinus taeda
Length = 508
Score = 27.1 bits (57), Expect = 4.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 175 HQYRIHTRGSGDHVCPISSLGVQLCFLSSSSH 80
H +R+ G+G VCP + LG+ L S SH
Sbjct: 424 HDFRLLPFGAGRRVCPGAQLGINL-VTSMMSH 454
>At2g21660.1 68415.m02577 glycine-rich RNA-binding protein (GRP7)
SP|Q03250 Glycine-rich RNA-binding protein 7
{Arabidopsis thaliana}
Length = 176
Score = 27.1 bits (57), Expect = 4.8
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 196 GHGQGLGGAYNYVDGGYSSGYGLNFGG 276
GH G GG Y GG SG G ++GG
Sbjct: 94 GHRGGGGGGYRSGGGGGYSGGGGSYGG 120
Score = 26.6 bits (56), Expect = 6.4
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSS--GYGLNFGG 276
G GY G G G + GG Y+ GGYSS G G ++GG
Sbjct: 108 GGGYSGGGGSYGGGGGRREGGGGYSGGGGGYSSRGGGGGSYGG 150
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = +1
Query: 160 GYGIDGLDVGYIGHGQG---LGGAYNYVDGGYSSGYGLNFGG 276
G G G GY G G GG GGY G G +GG
Sbjct: 128 GGGYSGGGGGYSSRGGGGGSYGGGRREGGGGYGGGEGGGYGG 169
>At2g05540.1 68415.m00586 glycine-rich protein
Length = 135
Score = 27.1 bits (57), Expect = 4.8
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGY---SSGYGLNFGGH 279
G GYG G G G+G GG Y GGY GYG GG+
Sbjct: 52 GGGYG--GFPGG--GYGGNPGGGYGNRGGGYRNRDGGYGNRGGGY 92
>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 895
Score = 27.1 bits (57), Expect = 4.8
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 310 KGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPY 408
K P PY P P P P P + P PY
Sbjct: 556 KSPPTPYVYHSPPPPPYYSPSPKPAYKSSPPPY 588
>At4g32920.1 68417.m04685 glycine-rich protein
Length = 1432
Score = 26.6 bits (56), Expect = 6.4
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 6 HPPLKRHNENSALLSFPAGSSSGCQ 80
+P LKRH L F A SSS CQ
Sbjct: 1157 NPALKRHGVRVDLARFQALSSSSCQ 1181
>At4g22030.1 68417.m03187 F-box family protein PF0064: F-box domain;
similar to F-box protein family, AtFBX7 (GI:20197899)
[Arabidopsis thaliana]
Length = 626
Score = 26.6 bits (56), Expect = 6.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 166 GIDGLDVGYIGHGQGLGG 219
GI + G+IGHG GL G
Sbjct: 307 GIAAVSSGFIGHGSGLAG 324
>At4g14300.1 68417.m02203 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative
Length = 411
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +1
Query: 160 GYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFG 273
GYG G G G G G G Y GGY +G +G
Sbjct: 243 GYGA-GYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYG 279
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +1
Query: 127 LDKRGLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYG 261
L G G GYG GY +G G A Y G ++GYG
Sbjct: 236 LPSYGSSGYGAGYGNGSNGAGYGAYGGYTGSAGGY-GAGATAGYG 279
>At2g48020.2 68415.m06011 sugar transporter, putative similar to
ERD6 protein {Arabidopsis thaliana} GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 463
Score = 26.6 bits (56), Expect = 6.4
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +1
Query: 139 GLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYG-LNFGGHTDVTKTITLVKG 315
G L + + G+ LD+G + G G+ GA++YV + + F G I + G
Sbjct: 108 GWLAIIFAKGVVALDLGRLATGYGM-GAFSYVVPIFIAEIAPKTFRGALTTLNQILICTG 166
Query: 316 VPVPYAVDRPVPYPV 360
V V + + V + V
Sbjct: 167 VSVSFIIGTLVTWRV 181
>At2g48020.1 68415.m06010 sugar transporter, putative similar to
ERD6 protein {Arabidopsis thaliana} GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 463
Score = 26.6 bits (56), Expect = 6.4
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +1
Query: 139 GLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYG-LNFGGHTDVTKTITLVKG 315
G L + + G+ LD+G + G G+ GA++YV + + F G I + G
Sbjct: 108 GWLAIIFAKGVVALDLGRLATGYGM-GAFSYVVPIFIAEIAPKTFRGALTTLNQILICTG 166
Query: 316 VPVPYAVDRPVPYPV 360
V V + + V + V
Sbjct: 167 VSVSFIIGTLVTWRV 181
>At2g33410.1 68415.m04095 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative
Length = 404
Score = 26.6 bits (56), Expect = 6.4
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +1
Query: 154 GYGYGIDGLDV-GYIGHGQGLGGAYN--YVDG-GYSSGYGLNFG 273
GYGYG +G+ G+ G+G G Y V G G+ SG ++G
Sbjct: 249 GYGYGSNGVGYGGFGGYGNPAGAPYGNPSVPGAGFGSGPRSSWG 292
>At2g05380.1 68415.m00566 glycine-rich protein (GRP3S) identical to
cDNA glycine-rich protein 3 short isoform (GRP3S)
GI:4206766
Length = 116
Score = 26.6 bits (56), Expect = 6.4
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
G+G G G GHG GG Y G Y G G GG
Sbjct: 43 GFGDNGGGRYQGGGGHGGHGGGGYQGGGGRYQGGGGRQGGG 83
>At1g32760.1 68414.m04039 glutaredoxin family protein contains Pfam
profile PF00462: Glutaredoxin
Length = 314
Score = 26.6 bits (56), Expect = 6.4
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 281 PTSPRPSPSSKASLYLTPSTDP 346
P+ P PS SS A +TP T P
Sbjct: 48 PSPPSPSSSSSAKSVITPMTPP 69
>At1g01060.2 68414.m00007 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain;
identical to cDNA LATE ELONGATED HYPOCOTYL MYB
transcription factor GI:3281845
Length = 645
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +1
Query: 307 VKGVPVPYAVDRPVPYPVEK---HVPYPVK 387
VKG+PV A+D +P P K + PYP K
Sbjct: 78 VKGIPVCQALDIEIPPPRPKRKPNTPYPRK 107
>At1g01060.1 68414.m00006 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain;
identical to cDNA LATE ELONGATED HYPOCOTYL MYB
transcription factor GI:3281845
Length = 645
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +1
Query: 307 VKGVPVPYAVDRPVPYPVEK---HVPYPVK 387
VKG+PV A+D +P P K + PYP K
Sbjct: 78 VKGIPVCQALDIEIPPPRPKRKPNTPYPRK 107
>At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containing
protein similar to Hsc70-interacting protein (Hip) from
{Homo sapiens} SP|P50502, {Rattus norvegicus} SP|P50503;
contains Pfam profile PF00515: tetratricopeptide repeat
(TPR) domain
Length = 441
Score = 26.2 bits (55), Expect = 8.5
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +1
Query: 154 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGG 276
G+ G+ G+ G+ G G+GG GG G GG
Sbjct: 308 GFPGGMGGMPGGFPGGMGGMGGMPGGFPGGMGGGMPAGMGG 348
>At2g21660.2 68415.m02578 glycine-rich RNA-binding protein (GRP7)
SP|Q03250 Glycine-rich RNA-binding protein 7
{Arabidopsis thaliana}
Length = 159
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = +1
Query: 160 GYGIDGLDVGYIGHGQG---LGGAYNYVDGGYSSGYGLNFGG 276
G G G GY G G GG GGY G G +GG
Sbjct: 111 GGGYSGGGGGYSSRGGGGGSYGGGRREGGGGYGGGEGGGYGG 152
>At1g22790.1 68414.m02847 expressed protein identical to
hypothetical protein GB:CAA72910
Length = 216
Score = 26.2 bits (55), Expect = 8.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 214 GGAYNYVDGGYSSGYGLNFGGHTDVTKTITLV 309
GG ++ GYS G L F G DV + + +V
Sbjct: 8 GGLFSASASGYSKGLTLLFSGDKDVDRPMRVV 39
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,449,148
Number of Sequences: 28952
Number of extensions: 159099
Number of successful extensions: 1008
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 605614832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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