Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0857
(701 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 460 e-130
SB_56| Best HMM Match : Actin (HMM E-Value=0) 460 e-130
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 459 e-130
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 457 e-129
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 356 1e-98
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 252 2e-67
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 244 7e-65
SB_54| Best HMM Match : Actin (HMM E-Value=0) 237 6e-63
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 205 3e-53
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 172 2e-43
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 106 2e-23
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 94 9e-20
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 7e-13
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 48 1e-05
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.001
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 36 0.032
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.073
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.097
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 33 0.30
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.68
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 31 1.2
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 31 1.2
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 31 1.2
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 1.6
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.6
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.1
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 30 2.1
SB_43791| Best HMM Match : Hep_59 (HMM E-Value=0.54) 29 2.8
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 29 2.8
SB_16681| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_20840| Best HMM Match : Rota_NS26 (HMM E-Value=4.2) 29 2.8
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 29 2.8
SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12) 29 2.8
SB_48165| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07) 29 3.6
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 4.8
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 4.8
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 29 4.8
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 4.8
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 4.8
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_41539| Best HMM Match : PUD (HMM E-Value=0.42) 28 6.4
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 28 6.4
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 28 6.4
SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23) 28 6.4
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 28 6.4
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_43663| Best HMM Match : F-box (HMM E-Value=4e-07) 28 8.4
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 8.4
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_43523| Best HMM Match : GRP (HMM E-Value=0.013) 28 8.4
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 28 8.4
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 8.4
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 28 8.4
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 460 bits (1135), Expect = e-130
Identities = 217/221 (98%), Positives = 220/221 (99%)
Frame = +3
Query: 3 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 182
DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
Query: 183 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 362
IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 86 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 145
Query: 363 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 542
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 146 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 205
Query: 543 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDG 665
EREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDG
Sbjct: 206 EREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDG 246
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/27 (66%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = +1
Query: 628 AAPSRSLTN---FPTGQVITIGNERFR 699
AA S SL P GQVITIGNERFR
Sbjct: 231 AASSSSLEKSYELPDGQVITIGNERFR 257
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 460 bits (1134), Expect = e-130
Identities = 217/221 (98%), Positives = 220/221 (99%)
Frame = +3
Query: 3 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 182
DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK
Sbjct: 25 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 84
Query: 183 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 362
IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 85 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 144
Query: 363 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 542
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 145 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 204
Query: 543 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDG 665
EREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDG
Sbjct: 205 EREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDG 245
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/30 (60%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +1
Query: 619 LHPAAPSRSLTN---FPTGQVITIGNERFR 699
+ AA S SL P GQVITIGNERFR
Sbjct: 227 MQTAASSSSLEKSYELPDGQVITIGNERFR 256
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 459 bits (1132), Expect = e-130
Identities = 216/221 (97%), Positives = 220/221 (99%)
Frame = +3
Query: 3 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 182
DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
Query: 183 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 362
IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 86 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 145
Query: 363 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 542
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 146 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTA 205
Query: 543 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDG 665
EREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDG
Sbjct: 206 EREIVRDIKEKLCYVALDFEQEMETAASSSSLEKSYELPDG 246
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/30 (60%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +1
Query: 619 LHPAAPSRSLTN---FPTGQVITIGNERFR 699
+ AA S SL P GQVITIGNERFR
Sbjct: 228 METAASSSSLEKSYELPDGQVITIGNERFR 257
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 457 bits (1127), Expect = e-129
Identities = 216/221 (97%), Positives = 220/221 (99%)
Frame = +3
Query: 3 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 182
DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK
Sbjct: 25 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 84
Query: 183 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 362
IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 85 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 144
Query: 363 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 542
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 145 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 204
Query: 543 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDG 665
EREIVRDIKEKL YVALDFEQEMATAA+SSSLEKSYELPDG
Sbjct: 205 EREIVRDIKEKLAYVALDFEQEMATAAASSSLEKSYELPDG 245
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/27 (66%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = +1
Query: 628 AAPSRSLTN---FPTGQVITIGNERFR 699
AA S SL P GQVITIGNERFR
Sbjct: 230 AAASSSLEKSYELPDGQVITIGNERFR 256
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 356 bits (875), Expect = 1e-98
Identities = 181/221 (81%), Positives = 186/221 (84%)
Frame = +3
Query: 3 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 182
DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
Query: 183 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 362
IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYA
Sbjct: 86 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 145
Query: 363 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 542
SGRTTGIV+DS G + H + I ERGYSFTTTA
Sbjct: 146 SGRTTGIVMDS------------GDGVSHTV---------------PIYEERGYSFTTTA 178
Query: 543 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDG 665
EREIVRDIKEKLCYVALDFEQEM TAASSSS+EKSYELPDG
Sbjct: 179 EREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDG 219
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +1
Query: 619 LHPAAPSRSLTN---FPTGQVITIGNERFR 699
+ AA S S+ P GQVITIGNERFR
Sbjct: 201 MQTAASSSSIEKSYELPDGQVITIGNERFR 230
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 252 bits (617), Expect = 2e-67
Identities = 121/131 (92%), Positives = 127/131 (96%)
Frame = +3
Query: 273 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 452
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 453 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 632
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSS
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSS 197
Query: 633 SLEKSYELPDG 665
SLEKSYELPDG
Sbjct: 198 SLEKSYELPDG 208
Score = 138 bits (333), Expect = 5e-33
Identities = 63/66 (95%), Positives = 63/66 (95%)
Frame = +3
Query: 3 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 182
DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK
Sbjct: 25 DAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 84
Query: 183 IWHHTF 200
I TF
Sbjct: 85 IMFETF 90
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/30 (60%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +1
Query: 619 LHPAAPSRSLTN---FPTGQVITIGNERFR 699
+ AA S SL P GQVITIGNERFR
Sbjct: 190 MQTAASSSSLEKSYELPDGQVITIGNERFR 219
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 244 bits (596), Expect = 7e-65
Identities = 115/222 (51%), Positives = 154/222 (69%), Gaps = 3/222 (1%)
Frame = +3
Query: 9 PRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 182
P +FPS+VGRP R + + KD VGDEA R +L + YP+++GIV NWDDM+
Sbjct: 28 PAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKH 87
Query: 183 IWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 359
+W +TF +++ + P VLLTE PLNP NREKM ++MFE + +Y+AIQAVL+LY
Sbjct: 88 VWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLY 147
Query: 360 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 539
A G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ RGY+F T
Sbjct: 148 AQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHT 207
Query: 540 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDG 665
A+ E VR +KEKLCYV + EQE A ++ L + Y LPDG
Sbjct: 208 ADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDG 249
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 237 bits (580), Expect = 6e-63
Identities = 106/162 (65%), Positives = 132/162 (81%)
Frame = +3
Query: 180 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 359
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 360 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 539
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 540 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDG 665
AE++I+RD+KE LCY A+D+E+E+ A +S E Y LPDG
Sbjct: 2249 AEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDG 2290
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 3 DAPRAVFPSIVGRPRHQ 53
++PR VFP+IVGRPRH+
Sbjct: 2114 ESPRVVFPAIVGRPRHK 2130
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 205 bits (500), Expect = 3e-53
Identities = 96/106 (90%), Positives = 102/106 (96%)
Frame = +3
Query: 294 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 473
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 474 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 611
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 172 bits (419), Expect = 2e-43
Identities = 74/116 (63%), Positives = 101/116 (87%)
Frame = +3
Query: 228 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 407
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 408 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 575
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 106 bits (254), Expect = 2e-23
Identities = 47/126 (37%), Positives = 80/126 (63%)
Frame = +3
Query: 138 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 317
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 318 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 497
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 498 MKILTE 515
++ E
Sbjct: 123 RQMFEE 128
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 94.3 bits (224), Expect = 9e-20
Identities = 47/110 (42%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Frame = +3
Query: 339 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 515
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 516 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDG 665
RG++FT+++ +IV DIKEK+CY++ D +E+ ++ L K Y LPDG
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDG 876
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +3
Query: 9 PRAVFPSIVGRPRHQGVMVG--MGQKD-SYVGDEAQSKRGILTL 131
PR + P++VG P+ +++G + KD GD A +K G++ L
Sbjct: 722 PRIIQPAVVGNPQRFSMLIGDNVNVKDYKKYGDAAVAKSGVMHL 765
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 71.3 bits (167), Expect = 7e-13
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +3
Query: 306 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 482
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 483 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 614
+T ++ ++L ER E + IKE+ Y+ D +E A
Sbjct: 98 ITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +3
Query: 66 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 245
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.39
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 375 TGIVLDSGDGVSHTVPI 425
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 47.6 bits (108), Expect = 1e-05
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 11/203 (5%)
Frame = +3
Query: 87 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 260
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE----------------- 315
Query: 261 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVP 422
+ M +I+FE +N A+ A LS Y S +V+D+G +H VP
Sbjct: 316 ---GLEDAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVP 372
Query: 423 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 602
++ G + A+ R + +L E +F ++ +KE CYV+ F
Sbjct: 373 VFNGKVIKKAVRR-----------QLHVLDE---TF-------VINQVKEDTCYVSSQFY 411
Query: 603 QEMATA---ASSSSLEKSYELPD 662
++M A +++ + Y LPD
Sbjct: 412 KDMEIARQRGKENTIVREYVLPD 434
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 183 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 362
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 363 SGRTTGIV 386
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 35.9 bits (79), Expect = 0.032
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 3 DAPRAVFPSIVGRPRHQ 53
DAP+ VFP IVGRPRHQ
Sbjct: 1376 DAPKGVFPPIVGRPRHQ 1392
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 34.7 bits (76), Expect = 0.073
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +1
Query: 319 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 456
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 298 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTRDTHSPTPSC 459
CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1521 CSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 319 PPCTSPSKPCSRCTRPVVPPVSC 387
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.097
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 307 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 420
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 322 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 420
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 33.1 bits (72), Expect = 0.22
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 307 HSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTRDTHSPTPS 456
HST ++PS P + CT P P P + TP+T S PST T S TPS
Sbjct: 63 HSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 298 CSKHSTRPPCT--SPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTRDTHSPTPS 456
C+ + P T +PS P + CT P + TP+T S TPC PST T S TPS
Sbjct: 40 CTPSTPSTPSTPITPSTPSTPCTHST--PSAPSTPSTPS-TPCTPSTPSTPS-TPS 91
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +1
Query: 304 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTRDTHSP--TPS 456
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 301 SKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTRDTHSPTPS 456
S ST +PS P + CT P P P + TP+T S TPC + + TPS
Sbjct: 22 STPSTPSTPRTPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPS 73
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +1
Query: 328 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTRDTHSPTP 453
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 319 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTRDTHSPTPS 456
P TSP + P +R P+ PP C + V PTP S++ + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 328 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWP 474
T+P+ P + T P P + TP T + TP +P P+ P
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPAAAAAAP 178
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Frame = +1
Query: 322 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTRDTHSP 447
P T PC + CT+ +P +TP T TPC PST +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +1
Query: 298 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 420
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +1
Query: 322 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 420
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 319 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 456
P SP+ P P P + TP T +PT T+ T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 313 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 456
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 319 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTRDTHSPTPS 456
P +P+KP P + TP T SPT P +T +PTP+
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +1
Query: 313 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC---PSTRDTHSPTPS 456
T+P T+P+ T P S P +PTP P+T +PTP+
Sbjct: 37 TKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 310 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 450
+T P T K + T + P TP PTP T T +PT
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +1
Query: 313 TRP-PCTSPS--KPCSRCTRPVVPPVSCWTPATVSP-TPCPS--TRDTHSPT 450
T+P P T+P+ KP P P + TP +P TP P+ T H+PT
Sbjct: 92 TKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +1
Query: 310 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTRDTHSPTPS 456
ST P T+P+ T P + TP +P TP P+T PTP+
Sbjct: 46 STAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPA 97
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 319 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 414
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 129 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 281
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 270 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 386
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -2
Query: 475 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNM 296
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 295 IWVIFSLLALGLR 257
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -2
Query: 475 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 338
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -2
Query: 475 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 338
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 316 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHS 444
+PP T+PSK T P+ P++ TP T T +T+ T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 307 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTRDTHSPTP 453
H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 30.7 bits (66), Expect = 1.2
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -2
Query: 415 VWE--TPSPESSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMIWVIFSLLALG 263
VWE T P + T+P + D Y S +W+ VL N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 262 LRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 98
L A + T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 254 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 346
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 307 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 456
H RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 310 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 456
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 137 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 307 HSTRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 456
++T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 66 NTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPT 118
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +1
Query: 310 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTRD--THSPTPSCVWTWP 474
+T P T+P+KP + T P + PAT +PT +T T +PT S T P
Sbjct: 123 TTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPP 182
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 310 STRPPC-TSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 456
+T PP T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 52 TTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 310 STRPPCTSPSKPCSRC---TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 456
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 109 TTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 160
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.6
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 334 PSKPCSRCTRPVVPP 378
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +1
Query: 322 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 420
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 322 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 426
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 29.9 bits (64), Expect = 2.1
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Frame = -1
Query: 608 LLLEVESDVAQLLLDVTNDFPLGGGSERVAALGEDLHEVVCEVTTGQVQTQDGVGECVS- 432
+++ V V ++L V + G G + + + +D V + G+V GVG+
Sbjct: 15 MVVSVMMVVLVMMLMVRDSDDGGVGDDAIGRVSDD--GGVGDDADGRVSDDGGVGDDADG 72
Query: 431 -LVDGHGVGDTVAGVQHDTGG----TTGRVQREHGLDGDVHG 321
+ D GVGD G D GG GRV + G+ D G
Sbjct: 73 RVSDDGGVGDDADGRVSDDGGVGDNAEGRVSDDGGVGDDAIG 114
Score = 28.3 bits (60), Expect = 6.4
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Frame = -1
Query: 563 VTNDFPLGGGSE-RVAALGEDLHEVVCEVTTGQVQTQDGVGECVSLVDGHGVGDTVAGVQ 387
V++D +G +E RV+ G + + V+ DGVG + D GVGD G
Sbjct: 88 VSDDGGVGDNAEGRVSDDGGVGDDAIGRVSDDGGVGDDGVGR---VSDNGGVGDDANGRV 144
Query: 386 HDTGG----TTGRVQREHGLDGDVHGGRV 312
D GG GRV + G+ GD GRV
Sbjct: 145 SDDGGVGDDAEGRVSDDGGV-GDDGVGRV 172
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = -1
Query: 473 GQVQTQDGVGECVS--LVDGHGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHGGRVEC 306
G+V GVG+ + + D GVGD G D GG DG V V C
Sbjct: 170 GRVSDYGGVGDDANGRVSDDGGVGDNAEGRVSDDGGVGDNADGRVSDDGGVGDDDVVC 227
>SB_43791| Best HMM Match : Hep_59 (HMM E-Value=0.54)
Length = 214
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -1
Query: 608 LLLEVESDVAQLLLDVTNDFPLGGGSERVAALGEDLHEVVCEVTTGQVQTQDGV 447
L+LEV+ + + L D+ ND+PL G V+ +D+ C+ + Q G+
Sbjct: 34 LILEVDLEYPKSLYDLHNDYPLAAGKVNVS---KDMLSEYCDKIATKYGIQTGL 84
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 319 PPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTRDTHSPTP 453
PP T P+ P S P VP + P V+P P + PTP
Sbjct: 332 PPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_16681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +1
Query: 574 SCATSLSTSSRRWPPL---HPAAPSRSLTN 654
SC ++LS SR W +PAAP+RS+T+
Sbjct: 262 SCTSTLSNHSRAWSEKDTGNPAAPARSMTS 291
>SB_20840| Best HMM Match : Rota_NS26 (HMM E-Value=4.2)
Length = 466
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +1
Query: 574 SCATSLSTSSRRWPPL---HPAAPSRSLTN 654
SC ++LS SR W +PAAP+RS+T+
Sbjct: 376 SCTSTLSNHSRAWSEKDTGNPAAPARSMTS 405
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 328 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTR 432
+SP KP T+PVVP P+ + P P PS++
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 658 PTGQVITIGNERFR 699
P GQVI+IGNERFR
Sbjct: 17 PDGQVISIGNERFR 30
>SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12)
Length = 349
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 483 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 662
+T+ L+++ +R + F + RD L V L + T ASS S +S LPD
Sbjct: 216 VTEELVQLAAKRTFVFKVEMDETEYRDALLDLLVVKLQANGLLKTIASSRSRRRSKSLPD 275
>SB_48165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 483
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -1
Query: 608 LLLEVESDVAQLLLDVTN---DFPLGGGSERVAALGEDLHEVVCEVTTGQVQT 459
+LL+ ES+ A +LLD DF G ER+AA E + ++ ++ +QT
Sbjct: 354 VLLDEESEKANMLLDFYTHYKDFRKTAGEERLAAPLEFIRDLPSKILEAYIQT 406
>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
Length = 807
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 233 PRPAY*GSPQPQGQ---QREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHR 379
PR A +P+PQ + Q +PDHVR + V SR+ V R+Y R
Sbjct: 704 PRDATTHTPEPQQEPEVQSHMEPDHVRYMLERMSVNYPTSRSSFVDPRTYPR 755
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 355 CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 456
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 293 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIR 439
DH + I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 258 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 386
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 328 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 465
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 358 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWP 474
T VVPP+ P V P+P + SPTPSC+ P
Sbjct: 207 TPAVVPPI----PTLVVPSPLTQP-EVESPTPSCIEQQP 240
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +1
Query: 334 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPV 477
PS P S PV V T T +PT C T + P+C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +1
Query: 304 KHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPCPSTRDTHSPTP 453
KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 205 KHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/83 (27%), Positives = 29/83 (34%)
Frame = +2
Query: 251 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 430
G G + PDH + R P L V R+ + GL +R PH
Sbjct: 320 GPDHTHGVSKRTAPDHPLGLSK----RTAPDHTLGVSKRTAPDHPHGLSKRTAPHHPLGL 375
Query: 431 GIRTPPRHPASGLGRS*PHRLPH 499
T P HP R+ P PH
Sbjct: 376 SKSTAPDHPHGVSKRTAPDH-PH 397
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +2
Query: 263 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRT 442
P G + PDH + ++H P L + R+ + G+ +R PH T
Sbjct: 192 PHGVSKRTAPDHPHGV--SKHTA--PDHTLGLSKRTGPDHTHGVSKRTAPHHPLGLSKHT 247
Query: 443 PPRHP 457
P HP
Sbjct: 248 APDHP 252
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 331 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 453
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -2
Query: 409 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 236
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 235 G 233
G
Sbjct: 147 G 147
>SB_41539| Best HMM Match : PUD (HMM E-Value=0.42)
Length = 1582
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 365 RSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLGRS*PHRLPHE 502
R R R G R+ P + G TPP+ PA+ RL HE
Sbjct: 942 RRLRRSRKGTRKGDTPRKEGEAGAATPPQSPAAAPQSPPVQRLVHE 987
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 574 SCATSLSTSSRRWPPLHPAAPSRSLTNFPTGQV 672
SCA S S+ + L PA+P+ S++ F T Q+
Sbjct: 970 SCAEPRSIDSKHYTALSPASPASSISCFSTLQL 1002
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 287 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRH 454
DP HV R +RHVRR PS + VR ++ +RR L R H+R RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23)
Length = 932
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
Frame = +1
Query: 328 TSPSKPCSRCTRPVVPPVSCWTPATVS---------PTPCPSTRDTHSPTPSC-VWT 468
T S+PC +CT V P + T A S PTP S R+ H +P WT
Sbjct: 38 TGLSRPCQKCTVFVSTPDNSVTGAVASSVPSFGVELPTPRTSARNPHQRSPPLQAWT 94
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 316 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 453
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 304 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 456
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_43663| Best HMM Match : F-box (HMM E-Value=4e-07)
Length = 717
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 693 SFVSDGDDLTRREVRKTSRGSCWMQRWPSPARSRE 589
+F + D L + K++ SC + RWP+P R R+
Sbjct: 674 NFPMEFDKLNNNMIMKSAVNSC-VDRWPTPMRMRK 707
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 319 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 417
PP +P+ P T P VPP + P T P P
Sbjct: 227 PPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKP 259
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 257 PQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGI 436
PQ G EDD D+V+ ++ +RH + +V+ S RA RR R +R
Sbjct: 647 PQVDGANDEDDTDNVQLESRSQGQQRHSNSKSSVQSSSELVKRARTTRRLGVSRVKIRVS 706
Query: 437 RT 442
+T
Sbjct: 707 QT 708
>SB_43523| Best HMM Match : GRP (HMM E-Value=0.013)
Length = 446
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -1
Query: 494 VVCEVTTGQVQTQDGVGECVSLVDGHGVGDTVAGVQHDTGGTT 366
+V +T G+ DG G DG GVG G HD GG T
Sbjct: 250 LVVVMTGGETGHDDGDGSGHDDGDGSGVGFRNDGDGHDGGGET 292
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 308 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTP 445
I H++ RH S+ L R R HR + RR H+ + P
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRP 1633
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 340 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSC 459
K C R VPPVS +P PC P +C
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 298 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPAT-VSPTPCPSTRDTHSPTPS 456
C+ T P +P+ + T P + +TP T +PTP + +++PTPS
Sbjct: 40 CTTSYTPTPSYTPTPSYTPTTS--YTPTTSYTPTTSYTPTPSYTPTTSYTPTPS 91
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 403 VSPTPCPSTRDTHSPTPSCVWTWPV 477
VS TP + + H PTP C +PV
Sbjct: 10 VSSTPSQMSAERHEPTPQCRLKFPV 34
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,462,351
Number of Sequences: 59808
Number of extensions: 647762
Number of successful extensions: 2957
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 2384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2903
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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