Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0856
(708 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0595 - 4430738-4430785,4430904-4432679 43 2e-04
01_06_1574 + 38337669-38338196 41 8e-04
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701... 40 0.002
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 39 0.003
02_05_0546 + 29889861-29890182,29891057-29892798 38 0.010
02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,513... 36 0.024
01_07_0292 + 42560302-42560668,42560818-42560910,42563746-425639... 36 0.042
06_02_0086 - 11567390-11567634,11568316-11568341,11571082-115712... 35 0.073
01_05_0282 - 20347915-20348874,20348968-20349012,20349568-203498... 34 0.13
06_01_0609 + 4404287-4405023,4405496-4405631,4405724-4405876,440... 33 0.17
06_01_0878 + 6735266-6735340,6735946-6736041,6738610-6738720,673... 33 0.22
08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-26... 33 0.29
02_01_0173 + 1190846-1191134,1191235-1191557,1191645-1191958,119... 33 0.29
12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 32 0.51
04_03_0998 - 21555696-21556080,21556177-21556254,21556333-215564... 32 0.51
06_01_0007 + 130582-131544,132187-132264,132615-132732,133228-13... 31 0.68
09_01_0178 - 2548611-2548670,2549816-2549918,2549993-2550096,255... 31 0.90
07_03_1575 - 27848977-27849095,27849254-27849302,27850270-278502... 31 0.90
08_02_0598 - 19149218-19149524,19150325-19150896,19151374-191517... 31 1.2
07_03_0902 - 22435692-22436156,22436684-22436923,22437228-224373... 31 1.2
12_02_0998 + 25126114-25126596,25129213-25129339,25129349-251294... 30 1.6
01_06_1556 - 38222071-38222708,38222795-38222822,38222950-382230... 30 1.6
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223... 30 2.1
04_03_1041 - 21938347-21938529,21938618-21938773,21939291-219394... 30 2.1
02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159... 30 2.1
01_06_1454 + 37498513-37499154 30 2.1
12_02_0362 + 17998110-17998345,17998877-17998958,18000309-180003... 29 2.7
08_02_0614 - 19333231-19334091 29 2.7
04_04_1694 - 35419278-35419565,35419744-35419861,35420404-354204... 29 2.7
04_04_1324 + 32659752-32661972,32662067-32662761 29 2.7
02_03_0077 + 14874273-14874571,14875304-14876150,14876878-148771... 29 2.7
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 29 2.7
05_03_0142 - 8866316-8866608,8867652-8867886,8868801-8869076,886... 29 3.6
03_05_0774 - 27615899-27617134 29 3.6
03_02_0726 + 10722759-10722857,10722969-10723058,10723141-107232... 29 3.6
11_01_0734 - 6078023-6078203,6078645-6078866,6079323-6079390,607... 29 4.8
01_07_0375 - 43152161-43152262,43152556-43152664,43153433-431535... 29 4.8
10_08_0139 + 15145310-15145622,15145820-15145881,15145975-151463... 28 6.3
08_02_0659 - 19758925-19760172 28 6.3
08_01_0874 + 8575718-8576422,8576603-8576662,8576799-8576945,857... 28 6.3
07_03_1792 + 29569623-29569737,29569848-29569981,29570117-295702... 28 6.3
05_01_0459 - 3637741-3637995,3638078-3638204,3641273-3641495,364... 28 6.3
02_02_0247 + 8261735-8261873,8261932-8261975,8262100-8262224,826... 28 6.3
01_06_1723 - 39443176-39443505,39443615-39443710,39443834-394439... 28 6.3
01_05_0239 - 19712962-19713381 28 6.3
11_04_0182 - 14597325-14597881,14598082-14598243,14598416-14598950 28 8.4
10_08_0762 - 20410681-20411834,20411999-20412098,20412200-204122... 28 8.4
09_02_0512 + 10101274-10102248,10102363-10102748,10103807-10104503 28 8.4
07_02_0024 + 11934710-11934792,11934905-11935205 28 8.4
06_03_0969 - 26413534-26413594,26415020-26415318 28 8.4
04_04_1211 + 31783076-31783680,31784162-31784427,31784546-31785378 28 8.4
03_02_0557 + 9450212-9450346,9450553-9450633,9450768-9451114,945... 28 8.4
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 28 8.4
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 28 8.4
01_06_1228 - 35541160-35541729 28 8.4
01_04_0063 - 15574855-15575143,15575398-15575602,15575746-155759... 28 8.4
>01_01_0595 - 4430738-4430785,4430904-4432679
Length = 607
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +1
Query: 364 VPPADDGRIMCVVCKRREGPATGPATNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCK 543
V DDG + C VC +G + P I+ CD C HA C+ P+ ++I W C
Sbjct: 399 VEEEDDG-VHCAVCGSTDGDPSDP----IVFCDGCDLMVHASCYGNPLASFIPDGDWFCS 453
Query: 544 RC 549
C
Sbjct: 454 VC 455
>01_06_1574 + 38337669-38338196
Length = 175
Score = 41.1 bits (92), Expect = 8e-04
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +1
Query: 448 IIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQ 558
II CD C GYH C PP+ G WHC C+ Q
Sbjct: 86 IILCDGCDEGYHLYCLIPPLTLVPEG-EWHCSSCIVQ 121
>06_03_1511 -
30669292-30669401,30669894-30669930,30670012-30670107,
30670186-30670281,30670679-30670828,30670956-30671100,
30671178-30671251,30671325-30671445,30671697-30671821,
30671898-30672047,30672249-30672324,30672496-30672557,
30672597-30672839,30673354-30673683,30673776-30673932,
30674008-30674139,30674219-30674277,30674734-30674798,
30674878-30675094,30675413-30675499,30675655-30675750,
30675938-30676003,30676096-30676287,30676380-30676532,
30676812-30677052,30677322-30677515,30678212-30678348,
30678474-30678480,30678708-30678830,30679370-30679427,
30680018-30680090,30680493-30681765
Length = 1714
Score = 39.9 bits (89), Expect = 0.002
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 448 IIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVD 555
++ CD C +G+H C SPP+++ + +W+C C++
Sbjct: 271 MLLCDRCDKGWHLYCLSPPLES-VPPGNWYCSECMN 305
>07_03_0481 -
18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 448 IIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQRYRVAAAEN 585
++ CD C R YH +C +PP+ G +W C RC ++ + +N
Sbjct: 44 LLCCDSCPRTYHLECLNPPLKRAPPG-NWQCPRCRTKKVSLKLLDN 88
>02_05_0546 + 29889861-29890182,29891057-29892798
Length = 687
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +1
Query: 364 VPPADD---GRIMCVVCKRREGPATGPATNAIIACDMCGRGYHAKCHSPPVDAWINGASW 534
+PP+ + R+ C +CK +++ CD C +G H KC + + A W
Sbjct: 196 IPPSTEYMRSRLDCQICK-----VAIMDMESLLVCDACEKGAHLKCLQHYGNKGVPKAEW 250
Query: 535 HCKRCV 552
HC C+
Sbjct: 251 HCPTCL 256
>02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,
5139967-5140289,5141373-5142479,5142593-5143279,
5144214-5144522,5145488-5145823,5146165-5146263,
5146676-5146940,5146950-5147104,5147666-5149723,
5150168-5150367,5150662-5150718,5150965-5151079
Length = 1985
Score = 36.3 bits (80), Expect = 0.024
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 442 NAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRC 549
++++ CD C YH C +PP+ A I +W+C C
Sbjct: 1091 DSVLLCDKCDSEYHTYCLNPPL-ARIPEGNWYCPSC 1125
>01_07_0292 +
42560302-42560668,42560818-42560910,42563746-42563969,
42564047-42564147,42564229-42564441,42564843-42565002
Length = 385
Score = 35.5 bits (78), Expect = 0.042
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = +1
Query: 427 TGPATNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQRYRVAAAENRALKRSD 606
+G ++ CD C RG H C P+ A + W C C + V K D
Sbjct: 75 SGERDEELLLCDGCDRGRHTFC-LRPIAARVPTGPWFCPPCAPRSKPVKRFPMTQTKIVD 133
Query: 607 LFRF-KGGQPTKA 642
FR KG + +A
Sbjct: 134 FFRIQKGAEDAEA 146
>06_02_0086 -
11567390-11567634,11568316-11568341,11571082-11571224,
11571569-11571682,11571855-11572888,11574723-11575047,
11576843-11577124
Length = 722
Score = 34.7 bits (76), Expect = 0.073
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 442 NAIIACDMCGRGYHAKC-HSPPVDAWINGASWHCKRCV 552
+++I CD C RG H KC V+ A W+C CV
Sbjct: 315 HSMIICDACERGIHLKCLQHDGVNVLPPKAEWYCPTCV 352
>01_05_0282 -
20347915-20348874,20348968-20349012,20349568-20349816,
20350393-20350581,20351051-20351155,20351165-20351488,
20351493-20351555
Length = 644
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 451 IACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQRYR--VAAAENRALK 597
I CD C YH C +P + I W+C C +R + +A E R LK
Sbjct: 560 ILCDGCDEAYHLYCITPRRTS-IPKGKWYCSSCAIERAKEGMARHEKRMLK 609
>06_01_0609 +
4404287-4405023,4405496-4405631,4405724-4405876,
4405985-4406128,4406224-4406375,4406453-4406552,
4406653-4406775,4406876-4407037,4407190-4407247,
4407324-4407502,4408294-4408402,4408567-4408637,
4408891-4408986,4409727-4409803,4410983-4411066,
4411473-4411607,4411744-4411819,4413072-4413167,
4413580-4413671,4413745-4413868,4413966-4414052
Length = 996
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 448 IIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQR 561
++ CD+C G+H +C PP+ G W C C +R
Sbjct: 174 MVECDVCLGGFHLRCVRPPLRRVPEG-DWACPYCEAER 210
>06_01_0878 +
6735266-6735340,6735946-6736041,6738610-6738720,
6738816-6739309,6739422-6739587,6739666-6739789,
6739874-6739986,6740085-6740693,6743095-6743385,
6743845-6743913,6744099-6744188,6744281-6744696,
6744882-6744969
Length = 913
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Frame = +1
Query: 388 IMCVVCKRREGPATGPATNAIIACD-MCGRGYHAKCHSPPV---DAWINGASWHCKRC 549
I C C G N II CD +C RG+H C +PP+ D W C C
Sbjct: 315 IFCAAC----GSKDVTLKNDIILCDGICDRGFHQYCLNPPLLAEDIPQGDEGWLCPAC 368
>08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-269805,
269895-270098,271532-271664,271810-271881,273106-273168,
273252-275034,275169-275217
Length = 1229
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 448 IIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQR 561
I+ CD C GYH C P + I W+C C +R
Sbjct: 1155 IVMCDGCDEGYHIYCMRPARNT-IPKGKWYCTFCKIRR 1191
Score = 28.3 bits (60), Expect = 6.3
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +1
Query: 343 SSLKLLSVPPADDGRIMCVVCKRREGPATGPATNAIIACDMCGRGYHAKCHSP-PVDAWI 519
S++ +VPP GR +C C +G T + CD C YH C D
Sbjct: 949 STIPKRTVPP---GRDLCP-C---DGCGTKVDVEEGLICDECDTMYHFACVKLLNPDIKQ 1001
Query: 520 NGASWHCKRCVDQRYRVAA 576
A WHC C ++ +AA
Sbjct: 1002 VPAIWHCSTCSFKKKELAA 1020
>02_01_0173 +
1190846-1191134,1191235-1191557,1191645-1191958,
1192302-1192461
Length = 361
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = +1
Query: 376 DDGRIMCVVCKRREGPATGPATNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRC 549
DD + C C +G + ++ CD C RG H C P + + W C C
Sbjct: 29 DDDDVRCEAC------GSGESAAELLLCDGCDRGLHIFCLRPILPR-VPAGDWFCPSC 79
>12_01_0471 -
3672309-3672740,3673159-3673251,3673271-3673399,
3673400-3673448,3674291-3674378,3674477-3674573,
3675195-3675278,3675377-3675464,3676589-3676715,
3676774-3676848,3676934-3677042,3677125-3677448,
3677863-3678039
Length = 623
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +1
Query: 244 LSTSNDNDLCEVGASVARCLVKFGDGTHSWAPVSSLKLLSVP 369
L T ++DL +V + R +V +G+G +SW ++ K LS+P
Sbjct: 396 LLTGGEDDLVQVWSMDDRKIVAWGEGHNSWVQLNLPKKLSMP 437
>04_03_0998 - 21555696-21556080,21556177-21556254,21556333-21556424,
21556524-21556620,21557113-21557141,21557620-21557781,
21557981-21558061,21558156-21558314,21558394-21558510,
21558598-21558666,21558753-21558831,21560884-21561050,
21561109-21561229,21561522-21561649,21562293-21562361,
21562408-21562539,21562619-21562991,21563274-21563398,
21563500-21563655,21563785-21564198,21564634-21564691,
21566522-21566648,21568047-21568305,21569005-21569104,
21569231-21569317,21569454-21569692,21569914-21569999,
21570409-21570532,21571111-21574332
Length = 2444
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 448 IIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCV 552
+I CD C YH C P D I SW+C RC+
Sbjct: 1056 LICCDNCPASYHQDC-LPCQD--IPDGSWYCYRCL 1087
>06_01_0007 +
130582-131544,132187-132264,132615-132732,133228-133271,
133389-133448,133536-133588,133671-133837,133963-134167,
134989-135046,135225-135281,135363-135608,135938-136002,
136090-136158,136238-136331,136467-136607,137159-137304,
137452-138110,138222-138335,138406-138560
Length = 1163
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 352 KLLSVPPADDGRIMCVVCKRREGPATGPATNAIIACDMCGRGYHAKC 492
+ + + P D C +CK+++ + +I CD C + YH C
Sbjct: 545 RAIRIVPISDDLGGCALCKQKDFNNSVFDERTVILCDQCEKEYHVGC 591
>09_01_0178 -
2548611-2548670,2549816-2549918,2549993-2550096,
2550893-2550988,2551418-2551482,2551558-2551591,
2552469-2552540,2552567-2552644,2553416-2553477,
2554267-2554530,2555057-2555246,2555432-2555500,
2555613-2555669,2555746-2555846,2556029-2556146,
2556225-2556272,2556362-2556487,2556960-2557118,
2558119-2558216,2558324-2558416,2559741-2559937,
2560231-2560354,2561121-2561334,2561773-2561830,
2561955-2562433
Length = 1022
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 442 NAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQRYRVA 573
N + CD C HA+C+ +NG W C C + RV+
Sbjct: 521 NLFLQCDKCRMMVHARCYGELEP--LNGVLWLCNLCRPEAPRVS 562
>07_03_1575 -
27848977-27849095,27849254-27849302,27850270-27850287,
27850798-27851786,27852119-27852733,27852893-27852921,
27853990-27854453,27854530-27854654,27854743-27855025,
27855112-27856102,27856965-27857576,27857666-27858630
Length = 1752
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 448 IIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQR 561
++ CD C +H+KC D G +W C C+ Q+
Sbjct: 455 LLCCDGCPAAFHSKCVGVVEDLLPEG-NWFCPECLIQK 491
>08_02_0598 -
19149218-19149524,19150325-19150896,19151374-19151762,
19151850-19152163,19152312-19152356,19153451-19153805,
19154361-19154430
Length = 683
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +1
Query: 490 CHSPPVDAWINGASWHCKRCVDQRYRVAAAEN-RALKRSDLFRFKGGQP 633
C V W H + VDQ+YRV R + S LFR G P
Sbjct: 525 CRDTVVTIWHYHGGCHVGKVVDQQYRVIGVSGLRVIDGSTLFRSPGTNP 573
>07_03_0902 -
22435692-22436156,22436684-22436923,22437228-22437349,
22437441-22437587,22437753-22437882,22437981-22438116,
22438223-22438428,22438644-22438844,22438999-22439157,
22439781-22439858,22440453-22440542,22440625-22440777,
22440873-22440991,22441190-22441328,22441422-22441525,
22441944-22441989,22442087-22442252,22442356-22442383,
22442460-22442610,22442686-22442829,22442912-22443013,
22443566-22444093
Length = 1217
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 425 PLDRPPTLSSRATCVAEATTPNVTRPPSMPGSMVHHGIVKGVL 553
P D PP L +R TC P+ RP G + +G KG +
Sbjct: 26 PKDAPPALPARPTC--RGRLPSARRPSLPSGVKLENGAAKGAV 66
>12_02_0998 +
25126114-25126596,25129213-25129339,25129349-25129459,
25130122-25130270,25130356-25130643,25130753-25130941,
25131445-25131619,25132219-25132316
Length = 539
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 407 SDARGLPLDRPPTLSSRATCVAEATTPNVTRPPSMPGSM-VHHGIVKGV 550
S AR LD PP + RA ++ P+ PP++ G + VH I G+
Sbjct: 144 SRARIKVLDGPPGVPDRAVMISAKDEPDAPLPPAVDGLLRVHKRITDGL 192
>01_06_1556 -
38222071-38222708,38222795-38222822,38222950-38223070,
38223206-38223318,38223424-38223506,38223868-38223930,
38224100-38224254,38224411-38224580,38225101-38225189,
38225304-38225496,38225655-38225779,38226069-38226475,
38226855-38226919,38227414-38227692,38227772-38227845,
38228241-38228292,38228366-38228473,38228871-38228972,
38229100-38229173,38229262-38229435,38229667-38229771,
38229867-38229977,38230364-38230487
Length = 1150
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +1
Query: 376 DDGRIMCVVCKRREGPATGPATNAIIAC--DMCGRGYHAKCHSPPVDAWINGASWHCKRC 549
+ G C +CK G A + +I C C R +H C PP+ I +W C C
Sbjct: 298 NSGGPSCSICK------IGIACSFLIKCKNSTCSRSFHTFCLDPPLQEII--GTWECSWC 349
>11_01_0298 -
2231063-2232015,2232124-2232798,2232918-2232946,
2233053-2233513,2233593-2233717,2233801-2234098,
2235004-2236234,2236562-2237233,2237329-2238539
Length = 1884
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 448 IIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCV 552
++ CD C YH++C A++ W C CV
Sbjct: 556 LVCCDGCPWAYHSRCIGQN-KAFLPQGDWFCPECV 589
>04_03_1041 -
21938347-21938529,21938618-21938773,21939291-21939408,
21939536-21940203,21941773-21941802
Length = 384
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +1
Query: 532 WHCKRC--VDQRYRVAAAENRALKRSDLFRFK 621
W C +DQR AA+EN A+ RSDL +F+
Sbjct: 71 WRSVPCLDIDQREFAAASENWAISRSDLEKFE 102
>02_05_1041 -
33713561-33714564,33714844-33714904,33715640-33715951,
33716780-33716917
Length = 504
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +1
Query: 97 NEKKEEETQDAMPDSTTSTEKNNANP--FHCGDDVLVANKDGRYYLGTIIELSTSND 261
N++ E + D E P F G +KDGR+Y G +I L S+D
Sbjct: 80 NQEPTSEAPEVAVDPPDDVEPEPLEPQEFSVGSKCRFRHKDGRWYNGCVIGLEGSSD 136
>01_06_1454 + 37498513-37499154
Length = 213
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 466 CGRGYHAKCHSPPVDAWINGASWHCKRCVDQRYRVAAA 579
CG G+HA+C +D W+ A C C + + AAA
Sbjct: 164 CGHGFHARC----IDRWL-AARQTCPTCRREPFAAAAA 196
>12_02_0362 +
17998110-17998345,17998877-17998958,18000309-18000392,
18000600-18000734,18001395-18001570,18001654-18001805,
18003730-18004575,18004961-18005301
Length = 683
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 509 MPGSMVHHGIVKGVLTKDTE*QQQKTGH*NAQIYSGSKE 625
MP HHGIV+ + T+ + ++TG A Y KE
Sbjct: 4 MPSDSSHHGIVENSPYRTTQGRNEETGELGASWYFSRKE 42
>08_02_0614 - 19333231-19334091
Length = 286
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/60 (30%), Positives = 22/60 (36%)
Frame = +1
Query: 325 HSWAPVSSLKLLSVPPADDGRIMCVVCKRREGPATGPATNAIIACDMCGRGYHAKCHSPP 504
H + P LKL++ A GR +C CK G CD HA C P
Sbjct: 18 HPFHPAHKLKLITADDAGAGRFVCDGCKELGGAGCARYECEEAGCDF---DLHAPCALAP 74
>04_04_1694 - 35419278-35419565,35419744-35419861,35420404-35420490,
35420909-35420931,35421647-35421843,35421964-35422159,
35422382-35422481,35423288-35423374,35424053-35424282,
35424678-35424763,35425148-35425271,35425415-35428573,
35430014-35430019
Length = 1566
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 448 IIACDMCGRGYHAKCHSPPVDAWINGASWHCKRC 549
++ CD C YH C S D + SW+C C
Sbjct: 1037 LLCCDNCPSTYHQTCLS---DQELPEGSWYCHNC 1067
>04_04_1324 + 32659752-32661972,32662067-32662761
Length = 971
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/48 (41%), Positives = 22/48 (45%)
Frame = -1
Query: 507 DGGRVTFGVVASATHVARDDSVGGRSSGRPLASLAHHAHDATVIGGRH 364
D GR GV S A DDS GR L S++ H D V GG H
Sbjct: 258 DAGRRLLGVTLSE---ATDDSDDSGLPGRRLLSMSFHDADHGVHGGDH 302
>02_03_0077 +
14874273-14874571,14875304-14876150,14876878-14877147,
14877313-14878065
Length = 722
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 408 ATRGACHWTGHQRYHRVRHVWQRLPRQMSLAPRRCLDQWCIM 533
A RG R + VW+RL ++ PR +D W I+
Sbjct: 6 ALRGRISSFQQTRDESIPEVWERLQEYVAACPRHGMDDWLIL 47
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 19 VSKQLSLIDELLRDLDKTITPCASKKNEKKEEETQDAMPDSTTSTEKNNANPFHCGDDV 195
+ + + + E +L+K T C N+K+E+E D + +T EK++ N F D +
Sbjct: 508 IEDKTNFMPEKFSELEKVYTGCEKLNNKKEEQEENDKI--NTLKDEKDH-NTFEHTDSI 563
>05_03_0142 -
8866316-8866608,8867652-8867886,8868801-8869076,
8869166-8869292,8869869-8870116,8870189-8871104,
8871980-8872086,8872562-8872930
Length = 856
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 118 TQDAMPDSTTSTEKNNANPFHCGDDVLVANKD 213
TQD M S T+ N N +HCG N+D
Sbjct: 738 TQDQMKSSMTAIHNENKNLYHCGIVYAHRNED 769
>03_05_0774 - 27615899-27617134
Length = 411
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 431 DRPPTLSSRATCVAEATTPNVTRPPSMPGSMVHH 532
++PP + +++T A + TRPPS+ G H
Sbjct: 352 EKPPVVEAKSTAPAASVVVGPTRPPSIGGPRRQH 385
>03_02_0726 + 10722759-10722857,10722969-10723058,10723141-10723245,
10723597-10723698,10724721-10724805,10725281-10725365,
10725473-10725517,10725685-10728672,10728839-10729055,
10729193-10729765
Length = 1462
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 466 CGRGYHAKCHSPPVDAWINGASWHCKRC 549
CG G H C PP++A + W C +C
Sbjct: 1412 CGVGMHIDCCDPPLEA-VPEHDWLCPQC 1438
>11_01_0734 -
6078023-6078203,6078645-6078866,6079323-6079390,
6079919-6079981,6095129-6095782
Length = 395
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 416 RGLPLDRPPTLSSRATCVAEATTPNVTRPPSMPGSMVHHG 535
+ +PL+ P S++ T A A+TP PPS PG + HG
Sbjct: 188 QSIPLNAP---SAQPT--APASTPAPAAPPSAPGQLEKHG 222
>01_07_0375 -
43152161-43152262,43152556-43152664,43153433-43153504,
43153690-43153834,43153930-43154085,43154557-43154618,
43154695-43155020
Length = 323
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -2
Query: 476 PLPHMSHAMIALVAGPVAGPSRRLHTTHMMRPSSAGGTLSSFSDDTGAHECVPSPNL 306
P P M H +A G VA R L + + + GTL+ ++T + C +PN+
Sbjct: 116 PFPGMKHLDVAGGTGDVA--FRALERINSVSHRAMQGTLTDIEEETQIYVCDINPNM 170
>10_08_0139 +
15145310-15145622,15145820-15145881,15145975-15146355,
15146413-15146929,15147031-15147161
Length = 467
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 422 LPLDRPPTLSSRATCVAEATTPNVTRPPSMP 514
LP+D P +S AT + E T RPP P
Sbjct: 204 LPVDTIPFNNSTATAIVEYTDSPTARPPGPP 234
>08_02_0659 - 19758925-19760172
Length = 415
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = -1
Query: 510 IDGGRVTFGVVASATHVARDDSVGGRSSGRPLASLAHHAHDATVIGGRHA 361
+DGG + TH RDD V G+PL+S ++A AT GRHA
Sbjct: 67 MDGGGRAGTTHRTHTHTDRDDVVFVPVVGQPLSSGRYYAVRAT---GRHA 113
>08_01_0874 +
8575718-8576422,8576603-8576662,8576799-8576945,
8577390-8577527
Length = 349
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +1
Query: 376 DDGRIMCVVCKRREGPATGPATNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRC 549
+DG I C++C+ PA A A C YH C + W+ +W C C
Sbjct: 294 EDGDIKCIICQEEYLPAEEVAEMA------CKHYYHLAC----IQQWLRQKNW-CPIC 340
>07_03_1792 +
29569623-29569737,29569848-29569981,29570117-29570284,
29572817-29573003,29573098-29573422,29573591-29574368,
29574897-29575022
Length = 610
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 79 PCASKKNEKKEEETQD 126
PC S KN KK++ET D
Sbjct: 187 PCTSNKNSKKQKETND 202
>05_01_0459 -
3637741-3637995,3638078-3638204,3641273-3641495,
3641592-3641624,3641716-3641854
Length = 258
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +1
Query: 451 IACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQRYR 567
I CD+C R YH KC + + C C +R R
Sbjct: 219 IGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSSKRPR 257
>02_02_0247 +
8261735-8261873,8261932-8261975,8262100-8262224,
8262331-8262391,8262434-8262442
Length = 125
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 4 DIKAEVSKQLSLIDELLRDLDKTITPCASKKNEKKE 111
+ KA V K++ I L+ +D+ + K+N KKE
Sbjct: 87 EAKANVKKRIEYISAELKRMDRALKDLEEKQNSKKE 122
>01_06_1723 -
39443176-39443505,39443615-39443710,39443834-39443902,
39444381-39444443,39444521-39444598,39444725-39444838,
39445727-39445804,39446457-39446522,39446739-39446804,
39446896-39447003,39447355-39447432,39447951-39448010,
39448087-39448191,39448407-39448595,39448922-39448985,
39449244-39449385,39449494-39449654,39449952-39450076,
39450230-39450300,39450410-39450560,39450713-39450769,
39451049-39451143,39451331-39451379
Length = 804
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 425 PLDRPPTLSSRATCVAEATTPNVTRPPSM 511
P PP +S A +A TTP V+ PSM
Sbjct: 723 PTVAPPVATSSAHHIAPVTTPTVSTTPSM 751
>01_05_0239 - 19712962-19713381
Length = 139
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +3
Query: 438 HQRYHRVRHVWQRLPRQMSLAPRRCLDQWCIM 533
H R + W++L ++ P +DQW I+
Sbjct: 65 HTREESIPEAWEQLQEYVAACPHHGMDQWLIL 96
>11_04_0182 - 14597325-14597881,14598082-14598243,14598416-14598950
Length = 417
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = +3
Query: 408 ATRGACHWTGHQRYHRVRHVWQRLPRQMSLAPRRCLDQWCIM 533
A RG R + W+RL M+ P +D W I+
Sbjct: 6 ALRGRISSFQQTRDQSISEAWERLQEYMAACPHHGMDDWLIL 47
>10_08_0762 - 20410681-20411834,20411999-20412098,20412200-20412298,
20412563-20414133,20415080-20415128
Length = 990
Score = 27.9 bits (59), Expect = 8.4
Identities = 33/163 (20%), Positives = 63/163 (38%), Gaps = 3/163 (1%)
Frame = +1
Query: 79 PCASKKNEKKEEETQDAMPDSTTSTEKNNANPFHCGDDVLVANKDGRYYLGTIIELSTSN 258
PCA + ++ PD+ S ++ N N A+ + + L +
Sbjct: 696 PCAIEDAVMARLRVLNSCPDNIASLKQENNNHHQLDTSTNRADNIDDAVMSRLRILKSRP 755
Query: 259 DNDLCEVGASVARCLVKFGDGTHSW---APVSSLKLLSVPPADDGRIMCVVCKRREGPAT 429
DN + +G ++ GT+++ A +S L++L P + + K +T
Sbjct: 756 DN-VNPLGQESSKHEPDAATGTNNFIDNAVMSRLRILKSRPDNANSLGQESSKHEPDAST 814
Query: 430 GPATNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQ 558
G TN +I + R KC +++ + H + C DQ
Sbjct: 815 G--TNDLIDNAVMSRLRILKCRDDNINSLDDAIKQHVEACTDQ 855
>09_02_0512 + 10101274-10102248,10102363-10102748,10103807-10104503
Length = 685
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +1
Query: 424 ATGPATNAIIACDMCGR-GYHAKCHSPPVDAWINGASWHCKRCVDQR 561
AT P N M Y + V WING S+H VD R
Sbjct: 186 ATSPDKNLASGTTMTADISYDSSAEILAVTFWINGTSYHVSASVDMR 232
>07_02_0024 + 11934710-11934792,11934905-11935205
Length = 127
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 408 ATRGACHWTGHQRYHRVRHVWQRLPRQMSLAPRRCLDQWCIM 533
A RG R + W+RL +++ P +D+W I+
Sbjct: 86 ALRGRISSFQQTRDETIPEAWERLQEYVAICPHHGIDEWLIL 127
>06_03_0969 - 26413534-26413594,26415020-26415318
Length = 119
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 413 ARGLPLDRPPTLSSRATCVAEATTPNVTRPPSM-PGSMVH 529
+RG RPP + R +A RPP+M GS H
Sbjct: 65 SRGTQARRPPAAARRPPAMARGPQAQARRPPAMAQGSFCH 104
>04_04_1211 + 31783076-31783680,31784162-31784427,31784546-31785378
Length = 567
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Frame = +1
Query: 61 LDKTIT-----PCASKKNEKKEEETQDAMPDSTT 147
LDKT+ P AS+ E+KEEE + +PD +T
Sbjct: 443 LDKTVRVAVTRPRASRSREEKEEEEEVEIPDHST 476
>03_02_0557 +
9450212-9450346,9450553-9450633,9450768-9451114,
9451345-9451945,9452206-9452239,9452514-9452577,
9452909-9453325,9453439-9453523,9453773-9453831,
9453931-9454043,9456407-9456509,9456597-9456654,
9456781-9456834,9456922-9457131,9457254-9457312,
9457436-9457495,9457709-9457802,9458366-9458506,
9458562-9458741
Length = 964
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +1
Query: 394 CVVCKRREGPATGPATNAIIACDMCGRGYHAKCHS 498
C +C++ + + I+ C+ C R H KC++
Sbjct: 676 CYMCRKPHTVLGVISVDMIVFCNQCERALHVKCYN 710
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 88 SKKNEKKEEETQDAMPDSTTSTEKNNANP 174
+K+ +K ET+D P TT +K A+P
Sbjct: 269 AKEEQKPSPETKDKKPPETTGKDKKPADP 297
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 425 PLDRPPTLSSRATCVAEATTPNVTRPPSM 511
PL RPPTL + A PN PP+M
Sbjct: 158 PLPRPPTLPPPTSGAPGAPIPNSGAPPAM 186
>01_06_1228 - 35541160-35541729
Length = 189
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +1
Query: 454 ACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQRYRVAAAENRALKRSD 606
A +CG G+H +C VDAW+ C C AA + SD
Sbjct: 142 ALPLCGHGFHPEC----VDAWLRSRP-SCPLCRSSLLPAAATTKPDVAGSD 187
>01_04_0063 -
15574855-15575143,15575398-15575602,15575746-15575947,
15576038-15576613,15576623-15576786,15576826-15576928,
15577259-15577847,15578056-15578372
Length = 814
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 444 RYHRVRHVWQRLPRQMSLAPRRCLDQWCIM 533
R + VW+RL M+ P +D W I+
Sbjct: 176 RDESIPEVWERLQEYMAACPHHGMDDWLIL 205
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,632,417
Number of Sequences: 37544
Number of extensions: 442775
Number of successful extensions: 1750
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1743
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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