Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0856
(708 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 26 1.0
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 25 3.1
AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein p... 25 3.1
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 24 5.4
AJ439060-9|CAD27760.1| 348|Anopheles gambiae putative translati... 24 5.4
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 23 7.1
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 23 9.4
AY843205-1|AAX14774.1| 478|Anopheles gambiae odorant receptor O... 23 9.4
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 23 9.4
AY363725-1|AAR14938.1| 478|Anopheles gambiae seven transmembran... 23 9.4
AY341191-1|AAR13755.1| 191|Anopheles gambiae GNBP B1 protein. 23 9.4
AY341190-1|AAR13754.1| 191|Anopheles gambiae GNBP B1 protein. 23 9.4
AY341189-1|AAR13753.1| 191|Anopheles gambiae GNBP B1 protein. 23 9.4
AY341188-1|AAR13752.1| 191|Anopheles gambiae GNBP B1 protein. 23 9.4
AY146747-1|AAO12062.1| 288|Anopheles gambiae odorant-binding pr... 23 9.4
AJ618931-1|CAF02009.1| 288|Anopheles gambiae odorant-binding pr... 23 9.4
AJ439060-13|CAD27764.1| 319|Anopheles gambiae putative transcri... 23 9.4
AJ001042-1|CAA04496.1| 395|Anopheles gambiae putative gram nega... 23 9.4
AF081533-1|AAD29854.1| 395|Anopheles gambiae putative gram nega... 23 9.4
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 26.2 bits (55), Expect = 1.0
Identities = 13/50 (26%), Positives = 18/50 (36%)
Frame = +1
Query: 400 VCKRREGPATGPATNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRC 549
+C G A CD C +GY+ + G + CKRC
Sbjct: 735 ICDSETGRCICQHNTAGDTCDQCAKGYYGNA--------LGGTPYDCKRC 776
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 24.6 bits (51), Expect = 3.1
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Frame = -1
Query: 510 IDGGRVTFGVVASATHVARDDSVGGRSSGRPLAS----LAHHAHDATVIGGRHAEQ 355
+ GG V G A + S GG +SG P L+HH A G H Q
Sbjct: 671 LGGGAVGGGSGAGGGAGSSGGSGGGLASGSPYGGGGHHLSHHHGGAAAATGHHHHQ 726
>AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein
protein.
Length = 353
Score = 24.6 bits (51), Expect = 3.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 572 QQQKTGH*NAQIYSGSKEDNQRRQQQE 652
QQQ+ Q G+++ QRRQQQ+
Sbjct: 75 QQQQQRQPQRQAVVGTQQQQQRRQQQQ 101
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 23.8 bits (49), Expect = 5.4
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -2
Query: 473 LPHMSHAMIALVAGPVAGPSRRLHTTHMMRPSS 375
LPH H A V G PS++ H H + S
Sbjct: 230 LPHQQHPPGAGVQGAGPIPSQQKHQQHQQQQQS 262
>AJ439060-9|CAD27760.1| 348|Anopheles gambiae putative translation
initiation factor protein.
Length = 348
Score = 23.8 bits (49), Expect = 5.4
Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
Frame = -2
Query: 680 WMQYHK--VE*APAVAFVGC 627
W HK V APA+A VGC
Sbjct: 37 WSAIHKMQVRGAPAIAIVGC 56
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 23.4 bits (48), Expect = 7.1
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = -2
Query: 473 LPHMSHAMIALVAGPVAGPSRRLHTTHMMRPSSAGGTLSSFSDDTGAHECVPSPNLTKHR 294
+PH+SH++ + P R ++ + SS + + S D+ A + N KHR
Sbjct: 3106 IPHLSHSVSLQASVKTQPPRLRFVSSVEFKTSSGETSTTPLSPDSLADDS-SGENHNKHR 3164
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 23.0 bits (47), Expect = 9.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 572 QQQKTGH*NAQIYSGSKEDNQRRQQQE 652
QQQ+ Q +GS++ Q R QQ+
Sbjct: 305 QQQQQRQPQRQAVAGSQQQQQERMQQQ 331
>AY843205-1|AAX14774.1| 478|Anopheles gambiae odorant receptor
Or83b protein.
Length = 478
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 192 IISAVEWVSIVFLGAS 145
++S V WV+I F G S
Sbjct: 142 VLSVVAWVTITFFGES 157
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 23.0 bits (47), Expect = 9.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 298 CLVKFGDGTHSWAPVSSLKLLSVP 369
CL+KFG T++ A V L +P
Sbjct: 168 CLMKFGSWTYNGAQVELRHLDQIP 191
>AY363725-1|AAR14938.1| 478|Anopheles gambiae seven transmembrane G
protein-coupledreceptor protein.
Length = 478
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 192 IISAVEWVSIVFLGAS 145
++S V WV+I F G S
Sbjct: 142 VLSVVAWVTITFFGES 157
>AY341191-1|AAR13755.1| 191|Anopheles gambiae GNBP B1 protein.
Length = 191
Score = 23.0 bits (47), Expect = 9.4
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 496 SPPVDAWINGASWHCKRCVDQRYRVAAAENRALKRSDLFRFKGGQ 630
S P D N A + C R ++++ V ++ ++ F FK G+
Sbjct: 115 SYPTDHCTNDAFYGCVRVGNRQHIVNPVKSARIRTISSFNFKYGR 159
>AY341190-1|AAR13754.1| 191|Anopheles gambiae GNBP B1 protein.
Length = 191
Score = 23.0 bits (47), Expect = 9.4
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 496 SPPVDAWINGASWHCKRCVDQRYRVAAAENRALKRSDLFRFKGGQ 630
S P D N A + C R ++++ V ++ ++ F FK G+
Sbjct: 115 SYPTDHCTNDAFYGCVRVGNRQHIVNPVKSARIRTISSFNFKYGR 159
>AY341189-1|AAR13753.1| 191|Anopheles gambiae GNBP B1 protein.
Length = 191
Score = 23.0 bits (47), Expect = 9.4
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 496 SPPVDAWINGASWHCKRCVDQRYRVAAAENRALKRSDLFRFKGGQ 630
S P D N A + C R ++++ V ++ ++ F FK G+
Sbjct: 115 SYPTDHCTNDAFYGCVRVGNRQHIVNPVKSARIRTISSFNFKYGR 159
>AY341188-1|AAR13752.1| 191|Anopheles gambiae GNBP B1 protein.
Length = 191
Score = 23.0 bits (47), Expect = 9.4
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 496 SPPVDAWINGASWHCKRCVDQRYRVAAAENRALKRSDLFRFKGGQ 630
S P D N A + C R ++++ V ++ ++ F FK G+
Sbjct: 115 SYPTDHCTNDAFYGCVRVGNRQHIVNPVKSARIRTISSFNFKYGR 159
>AY146747-1|AAO12062.1| 288|Anopheles gambiae odorant-binding
protein AgamOBP42 protein.
Length = 288
Score = 23.0 bits (47), Expect = 9.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 332 HECVPSPNLTKHR 294
HECV NL KHR
Sbjct: 38 HECVTYLNLPKHR 50
>AJ618931-1|CAF02009.1| 288|Anopheles gambiae odorant-binding
protein OBPjj83d protein.
Length = 288
Score = 23.0 bits (47), Expect = 9.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 332 HECVPSPNLTKHR 294
HECV NL KHR
Sbjct: 38 HECVTYLNLPKHR 50
>AJ439060-13|CAD27764.1| 319|Anopheles gambiae putative
transcription factor protein.
Length = 319
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 623 EDNQRRQQQELTPPCD 670
+D Q++QQQ + P CD
Sbjct: 286 KDKQQQQQQLVLPKCD 301
>AJ001042-1|CAA04496.1| 395|Anopheles gambiae putative gram
negative bacteria bindingprotein protein.
Length = 395
Score = 23.0 bits (47), Expect = 9.4
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 496 SPPVDAWINGASWHCKRCVDQRYRVAAAENRALKRSDLFRFKGGQ 630
S P D N A + C R ++++ V ++ ++ F FK G+
Sbjct: 133 SYPTDHCTNDAFYGCVRVGNRQHIVNPVKSARIRTISSFNFKYGR 177
>AF081533-1|AAD29854.1| 395|Anopheles gambiae putative gram
negative bacteria bindingprotein protein.
Length = 395
Score = 23.0 bits (47), Expect = 9.4
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 496 SPPVDAWINGASWHCKRCVDQRYRVAAAENRALKRSDLFRFKGGQ 630
S P D N A + C R ++++ V ++ ++ F FK G+
Sbjct: 133 SYPTDHCTNDAFYGCVRVGNRQHIVNPVKSARIRTISSFNFKYGR 177
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,921
Number of Sequences: 2352
Number of extensions: 14636
Number of successful extensions: 43
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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