Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0856
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 41 0.001
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 41 0.001
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 40 0.002
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical p... 38 0.009
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical pr... 38 0.009
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein... 36 0.028
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 35 0.050
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 35 0.050
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 35 0.050
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 33 0.15
U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1 p... 32 0.35
AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical ... 32 0.35
AF022982-8|AAB69934.1| 234|Caenorhabditis elegans Hypothetical ... 32 0.35
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 32 0.46
Z50742-5|CAA90618.2| 650|Caenorhabditis elegans Hypothetical pr... 31 0.81
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein. 31 0.81
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated... 31 0.81
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated... 31 0.81
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 31 0.81
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 31 0.81
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 31 0.81
AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical ... 30 1.4
U97016-2|ABC71840.1| 216|Caenorhabditis elegans Hypothetical pr... 29 3.3
U97016-1|ABC71839.1| 234|Caenorhabditis elegans Hypothetical pr... 29 3.3
U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical pr... 29 4.3
U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z49207-6|CAJ58500.1| 348|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z49207-5|CAA89070.1| 402|Caenorhabditis elegans Hypothetical pr... 28 5.7
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical ... 28 7.5
Z49937-1|CAA90184.2| 670|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical pr... 27 9.9
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 40.7 bits (91), Expect = 0.001
Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 7/189 (3%)
Frame = +1
Query: 4 DIKAEVSKQLSLIDELLRDLDKTITPCASKKNEKKEEETQDAMPDSTTSTEK-----NNA 168
+ +A + +Q L D+L++D + A+++ EKK+ + A EK NN
Sbjct: 198 EFEAFIKQQEQLEDDLVKDKEDARIKRAAEREEKKKGALEAARAAKKAKLEKGEEAENND 257
Query: 169 NPFHCGDD--VLVANKDGRYYLGTIIELSTSNDNDLCEVGASVARCLVKFGDGTHSWAPV 342
C D +L+ + R Y I+ N + E S A C ++ G
Sbjct: 258 YCEECKQDGELLLCDTCPRAYHTVCID---ENMEEPPEGDWSCAHC-IEHGP-------- 305
Query: 343 SSLKLLSVPPADDGRIMCVVCKRREGPATGPATNAIIACDMCGRGYHAKCHSPPVDAWIN 522
+++ PA C +CK E ++ CD C +HA C PP+
Sbjct: 306 ---EVVKEEPAKQNDEFCKICKETEN---------LLLCDSCVCSFHAYCIDPPLTEVPK 353
Query: 523 GASWHCKRC 549
+W C RC
Sbjct: 354 EETWSCPRC 362
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 448 IIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQRYRVAAAENRALKRSDLF 612
++ CD C R YH C ++ G W C C++ V E K++D F
Sbjct: 268 LLLCDTCPRAYHTVCIDENMEEPPEG-DWSCAHCIEHGPEVVKEE--PAKQNDEF 319
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 40.7 bits (91), Expect = 0.001
Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 7/189 (3%)
Frame = +1
Query: 4 DIKAEVSKQLSLIDELLRDLDKTITPCASKKNEKKEEETQDAMPDSTTSTEK-----NNA 168
+ +A + +Q L D+L++D + A+++ EKK+ + A EK NN
Sbjct: 198 EFEAFIKQQEQLEDDLVKDKEDARIKRAAEREEKKKGALEAARAAKKAKLEKGEEAENND 257
Query: 169 NPFHCGDD--VLVANKDGRYYLGTIIELSTSNDNDLCEVGASVARCLVKFGDGTHSWAPV 342
C D +L+ + R Y I+ N + E S A C ++ G
Sbjct: 258 YCEECKQDGELLLCDTCPRAYHTVCID---ENMEEPPEGDWSCAHC-IEHGP-------- 305
Query: 343 SSLKLLSVPPADDGRIMCVVCKRREGPATGPATNAIIACDMCGRGYHAKCHSPPVDAWIN 522
+++ PA C +CK E ++ CD C +HA C PP+
Sbjct: 306 ---EVVKEEPAKQNDEFCKICKETEN---------LLLCDSCVCSFHAYCIDPPLTEVPK 353
Query: 523 GASWHCKRC 549
+W C RC
Sbjct: 354 EETWSCPRC 362
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 448 IIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQRYRVAAAENRALKRSDLF 612
++ CD C R YH C ++ G W C C++ V E K++D F
Sbjct: 268 LLLCDTCPRAYHTVCIDENMEEPPEG-DWSCAHCIEHGPEVVKEE--PAKQNDEF 319
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 439 TNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCV 552
T+ I+ CD C YHA C PP+ I W C RC+
Sbjct: 337 TSNILLCDTCPSSYHAYCIDPPLTE-IPEGEWSCPRCI 373
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +1
Query: 448 IIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQRYRVAAAENRALK 597
++ CD C R YH C ++ G W C C + V E K
Sbjct: 277 LMLCDTCTRAYHVACIDENMEQPPEG-DWSCPHCEEHGPDVLIVEEEPAK 325
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 439 TNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCV 552
T+ I+ CD C YHA C PP+ I W C RC+
Sbjct: 337 TSNILLCDTCPSSYHAYCIDPPLTE-IPEGEWSCPRCI 373
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +1
Query: 448 IIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQRYRVAAAENRALK 597
++ CD C R YH C ++ G W C C + V E K
Sbjct: 277 LMLCDTCTRAYHVACIDENMEQPPEG-DWSCPHCEEHGPDVLIVEEEPAK 325
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 439 TNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCV 552
T+ I+ CD C YHA C PP+ I W C RC+
Sbjct: 337 TSNILLCDTCPSSYHAYCIDPPLTE-IPEGEWSCPRCI 373
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +1
Query: 448 IIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQRYRVAAAENRALK 597
++ CD C R YH C ++ G W C C + V E K
Sbjct: 277 LMLCDTCTRAYHVACIDENMEQPPEG-DWSCPHCEEHGPDVLIVEEEPAK 325
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +1
Query: 394 CVVCKRREGPATGPATNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRC 549
C+ C EG TG ++ CD C YH C P +D I W C+ C
Sbjct: 560 CLDCTVCEGCGTGGDEANLLLCDECDVSYHIYCMKPLLDK-IPQGPWRCQWC 610
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +1
Query: 394 CVVCKRREGPATGPATNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRC 549
C+ C EG TG ++ CD C YH C P +D I W C+ C
Sbjct: 560 CLDCTVCEGCGTGGDEANLLLCDECDVSYHIYCMKPLLDK-IPQGPWRCQWC 610
>Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical
protein F26H11.2g protein.
Length = 413
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 436 ATNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQRYRV 570
A+ I C++C R YH C + W C+ C++++ RV
Sbjct: 129 ASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEECIEEQERV 173
>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein
F26H11.2c protein.
Length = 2266
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 436 ATNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQRYRV 570
A+ I C++C R YH C + W C+ C++++ RV
Sbjct: 1982 ASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEECIEEQERV 2026
>Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical
protein F26H11.2d protein.
Length = 692
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 436 ATNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQRYRV 570
A+ I C++C R YH C + W C+ C++++ RV
Sbjct: 408 ASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEECIEEQERV 452
>Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical
protein F26H11.2f protein.
Length = 510
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 436 ATNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQRYRV 570
A+ I C++C R YH C + W C+ C++++ RV
Sbjct: 226 ASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEECIEEQERV 270
>Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical
protein F26H11.2e protein.
Length = 405
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 436 ATNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQRYRV 570
A+ I C++C R YH C + W C+ C++++ RV
Sbjct: 121 ASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEECIEEQERV 165
>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
protein.
Length = 1376
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 391 MCVVCKRREGPATGPATNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQR 561
+C +CK +G + ++ CD C G H +C P + G W C+RC +++
Sbjct: 1088 LCQICKSMDG-------DEMLVCDGCESGCHMECFRPRMTKVPEG-DWFCQRCREEK 1136
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
T01D3.7 protein.
Length = 2882
Score = 35.1 bits (77), Expect = 0.050
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +1
Query: 322 THSWAPVSSLKLLSVPPADDGRIMCVVCKRREGPATGPATNAIIACDMCGRGYHAKCHSP 501
+ S PV S + + DDG +C + P PAT+ ++ C+ CG G +C
Sbjct: 1654 SQSEVPVHSSSNILIRQKDDGN---EICDSKNQPIV-PATSTLVMCN-CGDGARTRCREK 1708
Query: 502 PVDAWINGASWH 537
A G SW+
Sbjct: 1709 YHSATACGGSWN 1720
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 35.1 bits (77), Expect = 0.050
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +1
Query: 70 TITPCASKKNEKKEEETQDAMPDSTTSTEKNNANPFHCGDDVLVANK 210
+I P + +K+E+E+QD+ S S+ NNA+ C +DVL+ K
Sbjct: 377 SIRPPRYELTDKEEDESQDSFNLSDLSSSANNASFVTCPEDVLIKRK 423
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 35.1 bits (77), Expect = 0.050
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +1
Query: 70 TITPCASKKNEKKEEETQDAMPDSTTSTEKNNANPFHCGDDVLVANK 210
+I P + +K+E+E+QD+ S S+ NNA+ C +DVL+ K
Sbjct: 665 SIRPPRYELTDKEEDESQDSFNLSDLSSSANNASFVTCPEDVLIKRK 711
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 394 CVVCKRREGPATGPATNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRC 549
C+ CK T + ++ CD C RGYH C +P ++ + C+ C
Sbjct: 308 CLECKSCTICGTSENDDKLLFCDDCDRGYHLYCLTPALEK-APDDEYSCRLC 358
>U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1
protein.
Length = 192
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -1
Query: 528 CTID-PGIDGGRVTFGVVASATHVARDDSVGGRSSGRP 418
CT+D P +DGG V FG V V + G SG P
Sbjct: 140 CTVDTPWLDGGHVVFGQVTDGMSVVKKIEKMGSRSGAP 177
>AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical
protein Y49A3A.5 protein.
Length = 192
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -1
Query: 528 CTID-PGIDGGRVTFGVVASATHVARDDSVGGRSSGRP 418
CT+D P +DGG V FG V V + G SG P
Sbjct: 140 CTVDTPWLDGGHVVFGQVTDGMSVVKKIEKMGSRSGAP 177
>AF022982-8|AAB69934.1| 234|Caenorhabditis elegans Hypothetical
protein T23B12.1 protein.
Length = 234
Score = 32.3 bits (70), Expect = 0.35
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Frame = +1
Query: 328 SWAPVSSLKLLSVPPADDGRIMCVV---CKRREGPATGPATNAIIACDMCGRGYHAKCHS 498
S AP KL + P D I C C G + A N ++AC C YH C
Sbjct: 122 SSAPGGMKKLKKLVPVIDDSIYCTSEQPCAVCHGVSL--AGNQVLACRRCRDCYHMACSI 179
Query: 499 PPV---DAWINGASWHCKRCVDQRYRVAAAENRA 591
P V +A ++CK C+ + + + +R+
Sbjct: 180 PTVSIEEASEPSFKYYCKTCLVSKKVIDSNRSRS 213
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +1
Query: 394 CVVCKRREGPATGPATNAIIACDMCGRGYHAKCHSPPVDAW--INGASWHCKRC 549
CVVC++ + CD C + YH C SPP+ N W C C
Sbjct: 529 CVVCRK------STEQHKQTQCDECHKSYHIGCLSPPLTRLPKRNNFGWICHEC 576
>Z50742-5|CAA90618.2| 650|Caenorhabditis elegans Hypothetical
protein K09A11.5 protein.
Length = 650
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +1
Query: 394 CVVCKRREGPATGPATNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRC 549
C +C RR ++ C C +H KC D NG + C+RC
Sbjct: 53 CCICARR---------GEVLWCHSCPASFHIKCLGYDTDPQPNGTIFTCRRC 95
>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
Length = 1338
Score = 31.1 bits (67), Expect = 0.81
Identities = 26/89 (29%), Positives = 38/89 (42%)
Frame = +1
Query: 40 IDELLRDLDKTITPCASKKNEKKEEETQDAMPDSTTSTEKNNANPFHCGDDVLVANKDGR 219
I+ + D++K +TPCA+KKN+ KN F C A K
Sbjct: 851 IERIKADIEK-VTPCATKKNDDGTFAPIFTARLRDVYLRKNQPAIFECAVSASPAPKVTW 909
Query: 220 YYLGTIIELSTSNDNDLCEVGASVARCLV 306
+ G I+E SND E +VAR ++
Sbjct: 910 DFQGKILE---SNDRVTIEQDNNVARLIL 935
>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
protein 89, isoform c protein.
Length = 1393
Score = 31.1 bits (67), Expect = 0.81
Identities = 26/89 (29%), Positives = 38/89 (42%)
Frame = +1
Query: 40 IDELLRDLDKTITPCASKKNEKKEEETQDAMPDSTTSTEKNNANPFHCGDDVLVANKDGR 219
I+ + D++K +TPCA+KKN+ KN F C A K
Sbjct: 815 IERIKADIEK-VTPCATKKNDDGTFAPIFTARLRDVYLRKNQPAIFECAVSASPAPKVTW 873
Query: 220 YYLGTIIELSTSNDNDLCEVGASVARCLV 306
+ G I+E SND E +VAR ++
Sbjct: 874 DFQGKILE---SNDRVTIEQDNNVARLIL 899
>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
protein 89, isoform d protein.
Length = 1396
Score = 31.1 bits (67), Expect = 0.81
Identities = 26/89 (29%), Positives = 38/89 (42%)
Frame = +1
Query: 40 IDELLRDLDKTITPCASKKNEKKEEETQDAMPDSTTSTEKNNANPFHCGDDVLVANKDGR 219
I+ + D++K +TPCA+KKN+ KN F C A K
Sbjct: 818 IERIKADIEK-VTPCATKKNDDGTFAPIFTARLRDVYLRKNQPAIFECAVSASPAPKVTW 876
Query: 220 YYLGTIIELSTSNDNDLCEVGASVARCLV 306
+ G I+E SND E +VAR ++
Sbjct: 877 DFQGKILE---SNDRVTIEQDNNVARLIL 902
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 31.1 bits (67), Expect = 0.81
Identities = 26/89 (29%), Positives = 38/89 (42%)
Frame = +1
Query: 40 IDELLRDLDKTITPCASKKNEKKEEETQDAMPDSTTSTEKNNANPFHCGDDVLVANKDGR 219
I+ + D++K +TPCA+KKN+ KN F C A K
Sbjct: 6863 IERIKADIEK-VTPCATKKNDDGTFAPIFTARLRDVYLRKNQPAIFECAVSASPAPKVTW 6921
Query: 220 YYLGTIIELSTSNDNDLCEVGASVARCLV 306
+ G I+E SND E +VAR ++
Sbjct: 6922 DFQGKILE---SNDRVTIEQDNNVARLIL 6947
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 31.1 bits (67), Expect = 0.81
Identities = 26/89 (29%), Positives = 38/89 (42%)
Frame = +1
Query: 40 IDELLRDLDKTITPCASKKNEKKEEETQDAMPDSTTSTEKNNANPFHCGDDVLVANKDGR 219
I+ + D++K +TPCA+KKN+ KN F C A K
Sbjct: 7503 IERIKADIEK-VTPCATKKNDDGTFAPIFTARLRDVYLRKNQPAIFECAVSASPAPKVTW 7561
Query: 220 YYLGTIIELSTSNDNDLCEVGASVARCLV 306
+ G I+E SND E +VAR ++
Sbjct: 7562 DFQGKILE---SNDRVTIEQDNNVARLIL 7587
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +1
Query: 436 ATNAIIACDMCGRGYHAKCHSPPVDAWINGASWHCKRCVDQRYRVAAAENRALKRSD 606
A + ++ C C YH KC V++ A W C C Q+ +V R + D
Sbjct: 1123 AAHDLVLCSECDNCYHLKCAKLDVNS-DAPADWMCTSCRAQQRKVENEAKRMARDDD 1178
>AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical
protein Y65B4BL.3 protein.
Length = 347
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2
Query: 443 LVAGPVAGPSRRLHTTHMMRPSSAGGTLSSFSDDTGAHECVPSPNLTKHR 294
L AGP+ S RL + + GT+SS+S G + + S N + R
Sbjct: 287 LNAGPLLSDSYRLSVNNWQAANETRGTVSSYSQIRGWNNTIRSTNTMRQR 336
>U97016-2|ABC71840.1| 216|Caenorhabditis elegans Hypothetical
protein B0261.4b protein.
Length = 216
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 508 DAWINGASWHCKRCVDQRYRVAAAENRALKRSDLFRFKGGQP 633
DA++ W K + R R+ + RA + D+ RFK G P
Sbjct: 170 DAYVMQKLWQEKEFMKNRDRLDDEKRRAARTEDMDRFKRGAP 211
>U97016-1|ABC71839.1| 234|Caenorhabditis elegans Hypothetical
protein B0261.4a protein.
Length = 234
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 508 DAWINGASWHCKRCVDQRYRVAAAENRALKRSDLFRFKGGQP 633
DA++ W K + R R+ + RA + D+ RFK G P
Sbjct: 188 DAYVMQKLWQEKEFMKNRDRLDDEKRRAARTEDMDRFKRGAP 229
>U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical
protein K03A1.2b protein.
Length = 584
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +1
Query: 40 IDELLRDLDKTITPCASKKNEKKEEETQD--AMPDSTTSTEKNNANPFHCGDDVLVANKD 213
ID+ +D D+ + KK+ K+++++ A D T ++KN+ D + D
Sbjct: 68 IDDDEQDDDEDVKEVPKKKSHVKQKKSKKPPAKKDKTRKSKKNDQEITEELKDEIEEEDD 127
Query: 214 GRYYLGTIIELSTSNDNDLCEVGASVARC 300
Y TS DN+LC C
Sbjct: 128 SNEY--QACNADTSPDNELCHCDVHEIDC 154
>U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical
protein K03A1.2a protein.
Length = 586
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +1
Query: 40 IDELLRDLDKTITPCASKKNEKKEEETQD--AMPDSTTSTEKNNANPFHCGDDVLVANKD 213
ID+ +D D+ + KK+ K+++++ A D T ++KN+ D + D
Sbjct: 68 IDDDEQDDDEDVKEVPKKKSHVKQKKSKKPPAKKDKTRKSKKNDQEITEELKDEIEEEDD 127
Query: 214 GRYYLGTIIELSTSNDNDLCEVGASVARC 300
Y TS DN+LC C
Sbjct: 128 SNEY--QACNADTSPDNELCHCDVHEIDC 154
>Z49207-6|CAJ58500.1| 348|Caenorhabditis elegans Hypothetical
protein R07E3.1b protein.
Length = 348
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +1
Query: 58 DLDKTITPCASKKNEKKEEETQDAMPDSTTSTEKNNANPF 177
+ +KT+ P + K KE E + +P+S T+ + +++PF
Sbjct: 93 EFEKTLLPKSFYKRLHKEAEFIEPIPESLTAKKGESSSPF 132
>Z49207-5|CAA89070.1| 402|Caenorhabditis elegans Hypothetical
protein R07E3.1a protein.
Length = 402
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +1
Query: 58 DLDKTITPCASKKNEKKEEETQDAMPDSTTSTEKNNANPF 177
+ +KT+ P + K KE E + +P+S T+ + +++PF
Sbjct: 147 EFEKTLLPKSFYKRLHKEAEFIEPIPESLTAKKGESSSPF 186
>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical protein
F44E2.4 protein.
Length = 1283
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +1
Query: 40 IDELLRDLDKTITPCASKKNEKKEEETQDAMPDSTTSTEKNNANPFHCGDDVLV 201
++ +L T S E+ET+ +P +T +TE + CG+ LV
Sbjct: 1000 LETVLSSSTMVSTSSESDSESAPEQETEPTVPSTTETTESPSTPTDGCGESGLV 1053
>AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical
protein F33E11.6b protein.
Length = 447
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 391 MCVVCKRREGPATGPATNAIIACDMCGRGYHAKC 492
+C +C + E + I+ CD C RG+H C
Sbjct: 382 LCSICNKPE------KEDEIVFCDRCDRGFHTYC 409
>Z49937-1|CAA90184.2| 670|Caenorhabditis elegans Hypothetical
protein F14F3.2 protein.
Length = 670
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 94 KNEKKEEETQDAMPDSTTSTEKNNANP 174
K +KK E QD+M +S++S +++ NP
Sbjct: 535 KLDKKVERRQDSMMESSSSLSRSSQNP 561
>Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical
protein F54C8.1 protein.
Length = 298
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +1
Query: 244 LSTSNDNDLCEVGASVARCLVKFGDGTHSWAPVSSLKLLSVPPADDGRIMCVVCKRREGP 423
L+T+ + L E A + +FG G H + PV +KLL V +DD + G
Sbjct: 127 LTTNTSSFLLEDVAKGLQDKTRFG-GLHFFNPVPVMKLLEVIRSDDTSDETYATLIKFGT 185
Query: 424 ATGPATNA 447
A G T A
Sbjct: 186 AVGKTTVA 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,571,949
Number of Sequences: 27780
Number of extensions: 334434
Number of successful extensions: 1340
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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