Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0848
(706 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0532 - 16824394-16824447,16824545-16824665,16824748-168248... 129 2e-30
02_03_0280 - 17256524-17256733,17256838-17256958,17257318-172574... 124 7e-29
08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333... 123 1e-28
01_06_1791 - 39907362-39907453,39907682-39907753,39907941-399080... 100 1e-21
09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245... 98 7e-21
02_05_0823 - 32036445-32036546,32036867-32036919,32037513-320375... 97 2e-20
06_03_1031 - 27018871-27018916,27018987-27019110,27019251-270193... 90 2e-18
01_06_1316 + 36245368-36245507,36247229-36247315,36248334-362484... 89 4e-18
05_05_0095 - 22347552-22347696,22347988-22348094,22348114-223482... 84 9e-17
04_04_0027 + 22232781-22233051,22234256-22234329,22234471-222346... 83 2e-16
09_02_0288 + 6936867-6936879,6936965-6937038,6937445-6937588,693... 82 4e-16
08_02_1436 + 27083698-27084111,27084333-27084416,27084502-270845... 68 6e-12
09_01_0022 + 426649-426663,427170-427420,427479-427577,428321-42... 68 8e-12
01_05_0361 + 21377080-21377281,21378619-21378705,21379862-213801... 64 1e-10
01_05_0366 + 21419270-21419312,21420372-21420458,21420625-214209... 62 4e-10
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 56 2e-08
01_05_0367 + 21427130-21427136,21427733-21427822,21427927-214281... 50 2e-06
03_03_0065 + 14192725-14192813,14193004-14193088,14193971-141940... 48 5e-06
01_05_0359 + 21350580-21350829,21350990-21351064,21351156-213512... 45 7e-05
11_01_0294 + 2212807-2212876,2213664-2213843,2214505-2214594,221... 42 4e-04
09_01_0020 + 413723-413738,413867-413934,414849-415144,415275-41... 42 5e-04
12_01_0295 + 2235209-2235263,2236182-2236361,2236478-2236567,223... 42 6e-04
07_01_0246 + 1809762-1809803,1810383-1810557,1810678-1810763,181... 34 0.13
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 33 0.17
01_05_0372 + 21541220-21541457,21541832-21541912,21542027-215420... 33 0.17
01_06_0158 - 27079262-27079346,27079662-27079750,27080540-270806... 31 0.89
08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,469... 28 6.3
>04_03_0532 -
16824394-16824447,16824545-16824665,16824748-16824875,
16825457-16825603,16825682-16825807,16825895-16826160,
16826259-16826453,16826577-16826657,16826756-16826830,
16827270-16827530,16827633-16827719,16827844-16828060
Length = 585
Score = 129 bits (312), Expect = 2e-30
Identities = 60/111 (54%), Positives = 77/111 (69%)
Frame = +2
Query: 68 KLSVQGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVA 247
+L +G+ P+SG V VHYTGTL +G KFDSSRDRG PFKF +G+ EVI+GWDEG+
Sbjct: 54 RLLKEGEGWDRPESGDEVQVHYTGTLLDGTKFDSSRDRGTPFKFSLGQGEVIKGWDEGIK 113
Query: 248 KMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE*IQFVTKN 400
M GE+A T P+ AYG+ G P IPPN+TL FDVELL ++ + K+
Sbjct: 114 TMKKGEQAVFTVPPELAYGEAGSPPAIPPNATLRFDVELLSWASVKDICKD 164
Score = 62.9 bits (146), Expect = 2e-10
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Frame = +2
Query: 59 LLLKLSVQGDESTYPKSGQTVVVHYTGTLTNGKKFDSS-RDRGKPFKFRIGKSEVIRGWD 235
+L K+ +G+ P G V V + G L +G F D +PF+FR + +VI G D
Sbjct: 284 ILKKVLKEGEGYERPNDGAVVRVRFIGKLEDGTVFSKKGHDGDEPFEFRTDEEQVIEGLD 343
Query: 236 EGVAKMSVGERAKLTCSPDYAYGQ---QGHPGVIPPNSTLIFDVELLRLE 376
V M GE A + P +A+G + V+P NST+ ++VEL+ E
Sbjct: 344 RTVVTMKKGEVALVRLPPQHAFGSTETKQDLAVVPANSTVWYEVELVSFE 393
Score = 51.6 bits (118), Expect = 6e-07
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Frame = +2
Query: 44 CK*WVLLLKLSVQGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVI 223
CK + K+ +G + PK V+V Y L +G S+ G F + G
Sbjct: 162 CKDGGIFKKVLAEGHKWENPKDLDEVLVKYEARLEDGTVV--SKSDGVEFAVKDGY--FC 217
Query: 224 RGWDEGVAKMSVGERAKLTCSPDYAYGQQGHP-----GVIPPNSTLIFDVELL 367
+ V M GE+ LT P Y +G+QG P +PPN+TL D+ELL
Sbjct: 218 PALSKAVKTMKKGEKVLLTVKPQYGFGEQGKPASGAEAAVPPNATLYVDLELL 270
>02_03_0280 -
17256524-17256733,17256838-17256958,17257318-17257445,
17257603-17257671,17257757-17257882,17257970-17258235,
17258341-17258535,17258614-17258694,17258729-17258851,
17258941-17259201,17260044-17260130,17260260-17260578
Length = 661
Score = 124 bits (299), Expect = 7e-29
Identities = 58/111 (52%), Positives = 75/111 (67%)
Frame = +2
Query: 68 KLSVQGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVA 247
KL +G+ P +G V VHYTGTL +G KFDSSRDR PFKF +G+ +VI+GWD G+
Sbjct: 88 KLVKEGEGWERPDAGDEVQVHYTGTLLDGTKFDSSRDRDAPFKFTLGQGQVIKGWDLGIK 147
Query: 248 KMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE*IQFVTKN 400
M GE A T P+ AYG+ G P VIPPN+TL FDVEL+ E ++ + K+
Sbjct: 148 TMKKGENAIFTIPPELAYGEDGSPPVIPPNATLQFDVELISWESVKDICKD 198
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Frame = +2
Query: 59 LLLKLSVQGDESTYPKSGQTVVVHYTGTLTNGKKFDS-SRDRGKPFKFRIGKSEVIRGWD 235
+L K+ +G+ P V V G L +G F + D +PF+F+ + +V+ G D
Sbjct: 334 ILKKILHEGEGYERPSDCTLVRVKLIGKLEDGTIFVTRGHDGDEPFEFKTDEDQVVEGLD 393
Query: 236 EGVAKMSVGERAKLTCSPDYAYGQ---QGHPGVIPPNSTLIFDVELLRLE 376
+ V M GE A +T P+YA+G + V+PPNST+ ++VEL+ +
Sbjct: 394 KAVLSMKKGEVALVTIPPEYAFGSDETRQDLSVVPPNSTVYYEVELVSFD 443
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +2
Query: 197 FRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHP-----GVIPPNSTLIFDVE 361
+++ K + V M E+A LT P Y +G+QG P IPPN+TL ++E
Sbjct: 259 YKVLKGHFCPAISKAVKTMKKNEKALLTVKPQYGFGEQGRPAARDEAAIPPNATLHINLE 318
Query: 362 LL 367
L+
Sbjct: 319 LV 320
>08_02_1322 +
26131395-26131599,26132382-26132468,26133119-26133372,
26133430-26133526,26133613-26133693,26133782-26133976,
26134093-26134182,26134296-26134471,26134565-26134687,
26134799-26134945,26135027-26135163,26135247-26135364,
26135462-26135518
Length = 588
Score = 123 bits (297), Expect = 1e-28
Identities = 57/100 (57%), Positives = 70/100 (70%)
Frame = +2
Query: 68 KLSVQGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVA 247
KL +G+ P+ G V VHYTGTL +GKKFDSSRDRG PFKF++G+ +VI+GWD G+
Sbjct: 50 KLLKEGEGWETPEVGDEVEVHYTGTLLDGKKFDSSRDRGTPFKFKLGQGQVIKGWDLGIK 109
Query: 248 KMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 367
M GE A T PD AYG+ G P IP ++TL FDVELL
Sbjct: 110 TMKKGENAVFTIPPDLAYGESGSPPTIPASATLQFDVELL 149
Score = 71.7 bits (168), Expect = 5e-13
Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Frame = +2
Query: 59 LLLKLSVQGDESTYPKSGQTVVVHYTGTLTNGKKFDSS-RDRGKPFKFRIGKSEVIRGWD 235
+L K+ +G P G V V TG L +G F D +PF+F+ + EVI G D
Sbjct: 285 ILKKVLTEGTGYERPNEGAVVKVKITGKLQDGTIFTKKGHDEPEPFEFKTDEEEVIDGID 344
Query: 236 EGVAKMSVGERAKLTCSPDYAYG---QQGHPGVIPPNSTLIFDVELL 367
V M GE A +T P+YA+G + V+PPNST+I++VEL+
Sbjct: 345 RAVLNMKNGEVALVTIPPEYAFGSTESKQDLAVVPPNSTVIYEVELV 391
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Frame = +2
Query: 122 VVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAY 301
VV Y L +G S+ G F + G + V M E+ LT P Y +
Sbjct: 189 VVKYEARLEDGTVI--SKSEGAEFTVKDGF--FCPALAKAVKTMKKAEKVLLTVKPQYGF 244
Query: 302 GQQGHP-----GVIPPNSTLIFDVELL 367
G+ G P G +PPN+TL+ ++EL+
Sbjct: 245 GENGRPAAGEEGAVPPNATLLVNLELV 271
>01_06_1791 -
39907362-39907453,39907682-39907753,39907941-39908045,
39908212-39908302,39908787-39908849,39909448-39909497,
39909632-39909716
Length = 185
Score = 100 bits (240), Expect = 1e-21
Identities = 44/86 (51%), Positives = 58/86 (67%)
Frame = +2
Query: 110 GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSP 289
G + VHY G+LT+G FDSS DRG PF+F +G +VI+GWD+G+ M VGE+ KL
Sbjct: 58 GDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPA 117
Query: 290 DYAYGQQGHPGVIPPNSTLIFDVELL 367
YG++G P IP +TLIFD EL+
Sbjct: 118 KMGYGERGSPPKIPGGATLIFDTELI 143
>09_04_0633 -
19123930-19124009,19124240-19124344,19124453-19124543,
19124647-19124709,19126318-19126368,19126878-19126962,
19127102-19127283,19128493-19128582
Length = 248
Score = 97.9 bits (233), Expect = 7e-21
Identities = 44/86 (51%), Positives = 55/86 (63%)
Frame = +2
Query: 110 GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSP 289
G V VHY G LT+G FDSS +RG P +F +G +VI+GWD+G+ M VGE+ KL
Sbjct: 149 GDRVKVHYRGKLTDGTDFDSSYERGDPIEFELGTGQVIKGWDQGILGMCVGEKRKLKIPS 208
Query: 290 DYAYGQQGHPGVIPPNSTLIFDVELL 367
YG QG P IP +TLIFD EL+
Sbjct: 209 KLGYGAQGSPPTIPGGATLIFDTELV 234
>02_05_0823 -
32036445-32036546,32036867-32036919,32037513-32037574,
32037804-32037837,32038144-32038231
Length = 112
Score = 96.7 bits (230), Expect = 2e-20
Identities = 49/94 (52%), Positives = 62/94 (65%), Gaps = 5/94 (5%)
Frame = +2
Query: 101 PKSGQTVVVHYTGTLTNG---KKFDSSRDRGK-PFKFRIGKSEVIRGWDEGVAKMSVGER 268
P GQ V VH TG + KKF S++D G+ PF F IG+ VI+GWDEGV M VGE
Sbjct: 16 PVKGQKVTVHCTGFGKDNDLAKKFWSTKDAGQEPFSFNIGQGSVIKGWDEGVMTMQVGEV 75
Query: 269 AKLTCSPDYAYGQQGHPG-VIPPNSTLIFDVELL 367
A++ C+PDYAYG G P I PNS L+F++E+L
Sbjct: 76 ARIQCTPDYAYGASGFPAWGIRPNSVLVFEIEVL 109
>06_03_1031 -
27018871-27018916,27018987-27019110,27019251-27019311,
27019466-27019558,27019663-27020016
Length = 225
Score = 89.8 bits (213), Expect = 2e-18
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 14/104 (13%)
Frame = +2
Query: 104 KSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWD------EGVAKMSVGE 265
+ GQ + HYTG L +G FDSS RGKP FR+G EVI+GWD EG+ M G
Sbjct: 112 EQGQLIKAHYTGRLEDGTVFDSSYKRGKPLTFRVGVGEVIKGWDQGIVGGEGIPPMLAGG 171
Query: 266 RAKLTCSPDYAYGQQG------HPG--VIPPNSTLIFDVELLRL 373
+ L P+ AYG +G P VIPPNSTL+FDVE+ R+
Sbjct: 172 KRSLRLPPELAYGARGAGCRGWEPTSCVIPPNSTLLFDVEMFRV 215
>01_06_1316 +
36245368-36245507,36247229-36247315,36248334-36248439,
36249028-36249204,36249296-36249375,36249432-36249440,
36249474-36249566,36249788-36249947
Length = 283
Score = 88.6 bits (210), Expect = 4e-18
Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Frame = +2
Query: 125 VHYTGTLT-NGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAY 301
VHY GTL NG+ FD++ + F F IG+ VI+ WD V M VGE AK+TC P+YAY
Sbjct: 126 VHYEGTLAENGEVFDTTHEDNSVFSFEIGEGTVIKAWDIAVKTMKVGEVAKITCKPEYAY 185
Query: 302 GQQGHPGVIPP---NSTLIFDVELL 367
G G P IPP ++TL F+VEL+
Sbjct: 186 GAAGSPPEIPPEVQSATLTFEVELI 210
>05_05_0095 -
22347552-22347696,22347988-22348094,22348114-22348236,
22348325-22348458,22348766-22348874
Length = 205
Score = 84.2 bits (199), Expect = 9e-17
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Frame = +2
Query: 86 DESTYPKSGQTVV-VHYTGTLT-NGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSV 259
D++ P +V VHY GTL NG+ FD++ + F F IG+ VI+ WD + M V
Sbjct: 23 DDAIAPTDSLPLVDVHYEGTLAENGEVFDTTHEDNSIFSFEIGQGAVIKAWDIALRTMKV 82
Query: 260 GERAKLTCSPDYAYGQQGHPGVIPPNSTLI 349
GE AK+TC P+YAYG G P IPP S I
Sbjct: 83 GEVAKITCKPEYAYGSAGSPPEIPPKSVAI 112
>04_04_0027 +
22232781-22233051,22234256-22234329,22234471-22234638,
22234812-22234971,22235062-22235145,22235781-22236078,
22236158-22236364,22236465-22236735,22236971-22237055,
22237141-22237182,22237302-22237350,22237825-22237894,
22238314-22238463,22238592-22238619,22238856-22238990,
22240693-22241469,22242133-22242192,22242367-22242413
Length = 991
Score = 83.4 bits (197), Expect = 2e-16
Identities = 43/86 (50%), Positives = 55/86 (63%)
Frame = +2
Query: 110 GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSP 289
G+ V V Y G L NG FDS+ R + F FR+G EVI+GWD G+ M VG++ +LT P
Sbjct: 509 GKKVSVKYIGKLKNGTIFDSTVGR-RAFDFRLGIGEVIKGWDIGINGMRVGDKRRLTIPP 567
Query: 290 DYAYGQQGHPGVIPPNSTLIFDVELL 367
YG + G IP NSTL+FDVEL+
Sbjct: 568 SMGYGNK-RMGPIPQNSTLVFDVELV 592
>09_02_0288 +
6936867-6936879,6936965-6937038,6937445-6937588,
6937754-6937958,6938552-6938852,6938952-6939150,
6939393-6939477,6939554-6939595,6939676-6939724,
6939872-6939941,6940296-6940301
Length = 395
Score = 82.2 bits (194), Expect = 4e-16
Identities = 39/101 (38%), Positives = 63/101 (62%)
Frame = +2
Query: 71 LSVQGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAK 250
LS ++ +G V + Y GTL +GK +S+ KP+KF++G +VIRGWD G+
Sbjct: 297 LSTGNLDAEMASNGSKVSIKYVGTLQDGKIVESNVGE-KPYKFKLGAGKVIRGWDVGICG 355
Query: 251 MSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRL 373
M VG++ KLT P YG + G +P NS++I+++EL+++
Sbjct: 356 MRVGDKRKLTVPPAMCYGSKA-IGEVPKNSSIIYEIELVKV 395
>08_02_1436 +
27083698-27084111,27084333-27084416,27084502-27084551,
27084676-27084724,27085471-27085545,27085724-27085837
Length = 261
Score = 68.1 bits (159), Expect = 6e-12
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Frame = +2
Query: 89 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGER 268
E P G V +Y + NG+ FDSS ++G+P+ FR+G +VI+G DEG+ M VG
Sbjct: 157 EGPSPPIGFQVAANYVAMVPNGQIFDSSLEKGQPYIFRVGSGQVIKGLDEGILSMKVGGL 216
Query: 269 AKLTCSPDYAY--GQQGHPG--VIPPNSTLIFDVELL 367
+L A+ G PG + P+S ++FDV LL
Sbjct: 217 RRLYIPGPLAFPKGLTSAPGRPRVAPSSPVMFDVNLL 253
>09_01_0022 +
426649-426663,427170-427420,427479-427577,428321-428473,
428893-429051,429146-429287,429460-429544,429629-429670,
429784-429832,430540-430639,431240-431287
Length = 380
Score = 67.7 bits (158), Expect = 8e-12
Identities = 37/89 (41%), Positives = 50/89 (56%)
Frame = +2
Query: 110 GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSP 289
G+ V V Y L+NG D + + KF++G EVI GWD G+ M VG +L P
Sbjct: 271 GKKVYVKYVCMLSNGDTVDPTGE-SSTCKFKLGAGEVISGWDLGIDGMRVGGIRRLGIPP 329
Query: 290 DYAYGQQGHPGVIPPNSTLIFDVELLRLE 376
YG G G IPPN+ L FD+ELL+++
Sbjct: 330 HLGYGDVGR-GNIPPNAWLNFDIELLKVK 357
>01_05_0361 +
21377080-21377281,21378619-21378705,21379862-21380134,
21380304-21380378,21380470-21380550,21380837-21381034,
21381145-21381234,21381310-21381467,21381619-21381741,
21381891-21382034,21382175-21382285,21382583-21382624,
21383043-21383261,21385319-21385627
Length = 703
Score = 63.7 bits (148), Expect = 1e-10
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Frame = +2
Query: 125 VHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYG 304
VH+TG +G F S+R+ G P F +G+ V+RG+ V+ M GE+A T P+ A G
Sbjct: 68 VHFTGKRLDGTWFASTREDGVPLTFILGQENVMRGFSMAVSSMQAGEKAVFTIPPELA-G 126
Query: 305 QQGH-----PGVIPPNSTLIFDVELLRL 373
+ PG I PN L FD+EL+ L
Sbjct: 127 TKSRCPVDIPGNIAPNEALRFDIELISL 154
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = +2
Query: 59 LLLKLSVQGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDE 238
+L K+ +G S P +V+Y L +G S +F + + +
Sbjct: 166 ILKKIIKRGLGSDKPCDLDEALVNYNACLEDGMSVSMSEG----IEFNLAEGFFCPAFAR 221
Query: 239 GVAKMSVGERAKLTCSPDYAYGQQGHPGV-----IPPNSTLIFDVELLRLE*IQFVTKN 400
V M+ GE A L P+Y +G++G P + +PP++TL ++L+ + ++ + +N
Sbjct: 222 AVETMTEGEEAVLIVKPEYGFGERGRPSIGDEAGVPPDATLYVYLQLMSWKTVRHIGEN 280
>01_05_0366 +
21419270-21419312,21420372-21420458,21420625-21420900,
21421560-21421634,21421736-21421816,21422117-21422308,
21422756-21422772
Length = 256
Score = 62.1 bits (144), Expect = 4e-10
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Frame = +2
Query: 125 VHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYG 304
VH+TG L +G +F SSR+ P +F +G+ +V+ G++ V+ M GE+A T
Sbjct: 15 VHFTGELVDGTQFVSSRENDIPERFILGQEDVMHGFNLAVSSMQPGEKAIFTIPSALTMT 74
Query: 305 QQGHPGV----IPPNSTLIFDVELLRL 373
+ G P IPPN TL F++EL+ +
Sbjct: 75 KAGSPASIPSNIPPNQTLRFEIELIAM 101
Score = 35.9 bits (79), Expect = 0.031
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +2
Query: 107 SGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCS 286
S V V Y L +G +S + + +F + + V M GE A L
Sbjct: 130 SSDFVFVKYDACLMDG----TSVSKSEGVEFSLTDGFFCPAFAHAVHTMKEGEEAVLIVK 185
Query: 287 PDYAYGQQGHP-----GVIPPNSTL 346
P YA+G+QG P +PP++TL
Sbjct: 186 PKYAFGEQGRPSQGEEAAVPPDATL 210
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Frame = +2
Query: 101 PKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVA------KMSVG 262
P GQ + VHYT T+G FDS+ RG+P R+G +++RG ++G++ M VG
Sbjct: 127 PPRGQLINVHYTARFTDGIVFDSTYKRGRPLTMRLGAGKILRGLEQGISGGGGVPPMLVG 186
Query: 263 ERAKLTCSPDYAYGQQ 310
+ KL AYG +
Sbjct: 187 GKRKLMIPATLAYGPE 202
>01_05_0367 +
21427130-21427136,21427733-21427822,21427927-21428105,
21429115-21429432,21430537-21430563
Length = 206
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Frame = +2
Query: 137 GTLTNGKKFDSSRDRG--KPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAY--- 301
G L +G FD R G +PF+F + + +VI G DE V M GE A+ T P +A+
Sbjct: 7 GKLQDGTVFDR-RGYGDDEPFEFVVDEGQVIDGLDESVMTMEEGEVAEFTIPPQHAFDAV 65
Query: 302 GQQGHP-GVIPPNSTLIFDVELL 367
G H +P N+T+++ +ELL
Sbjct: 66 GSDQHQFAFVPRNATVVYKIELL 88
>03_03_0065 +
14192725-14192813,14193004-14193088,14193971-14194040,
14194730-14194827,14194931-14195101,14196192-14196224,
14196762-14196820,14197143-14197190,14197399-14197480,
14198317-14198475,14199036-14199093,14199801-14199949,
14200403-14200503,14200574-14200643,14201088-14201147,
14201883-14201939,14202247-14202315,14202485-14202562,
14202996-14203097,14203203-14203274,14203361-14203648
Length = 665
Score = 48.4 bits (110), Expect = 5e-06
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Frame = +2
Query: 125 VHYTGTLTNGKK---FDSSRDR-GKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPD 292
VHY G L + K +D+ D G+P +F G+ V G++ V M GE++ +TC PD
Sbjct: 333 VHYKGMLLDEPKSIFYDTRVDNHGEPLEFCSGEGLVPEGFEMCVRLMLPGEKSIVTCPPD 392
Query: 293 YAYGQQGH-PGVIPPNSTLIFDVELLRLE 376
+AY + P +P + + +++ELL E
Sbjct: 393 FAYDKFPRLPANVPEGAHVQWEIELLGFE 421
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Frame = +2
Query: 83 GDESTYPKSGQTVVVHYTGTLTNGKKFDSSR----DRGKPFKFRIGKSEVIRGWDEGVAK 250
G ++T P G V+VH T +G +S+R +G P +F +GKS++I G+ EG
Sbjct: 48 GGDAT-PAEGDQVIVHCTTRTIDGIIVNSTRREHGGKGVPLRFVLGKSKMILGFAEGFPT 106
Query: 251 MSVGERA 271
M +GE A
Sbjct: 107 MLMGEIA 113
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +2
Query: 134 TGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDY 295
T +GK+ S++ +P+ F IGKSEV +G + G+ M+ E+A + + Y
Sbjct: 220 TARTGDGKELLPSKE--EPYFFTIGKSEVPKGLEMGIGSMAREEKAIIYVTSAY 271
>01_05_0359 +
21350580-21350829,21350990-21351064,21351156-21351236,
21352633-21352830,21352930-21353019,21353096-21353253,
21353350-21353472,21354989-21355096,21355530-21355826
Length = 459
Score = 44.8 bits (101), Expect = 7e-05
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 89 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRG-KPFKFRIGKSEVIRGWDEGVAKMSVGE 265
E + ++ V V G L +G FD +G +PF+F + + +V G +E V M GE
Sbjct: 190 EGQHTENQAVVGVRLIGKLHDGAVFDQRGHQGDEPFEFVVDEEQVSDGLEEAVLTMWEGE 249
Query: 266 RAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 367
+ T P Q V+PP S++ +++EL+
Sbjct: 250 VSLFTIPPQCLQDQHV---VVPPGSSVTYEIELV 280
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 242 VAKMSVGERAKLTCSPDYAYGQQGHPGVIP----PNSTLIFDVELLRL 373
V+ M GE+A T P+ A + P IP PN L FDVEL+ L
Sbjct: 3 VSSMQAGEKAVFTIPPELAGTKSRCPADIPANLPPNQALQFDVELISL 50
>11_01_0294 +
2212807-2212876,2213664-2213843,2214505-2214594,
2215054-2215238,2215399-2215521,2215593-2215745,
2216090-2216416
Length = 375
Score = 42.3 bits (95), Expect = 4e-04
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +2
Query: 101 PKSGQTVVVHYTGTLTNG-KKFDSSRDRGKPFKFRIGKSEV-IRGWDEGVAKMSVGERAK 274
P T +HY + KF+ + P + IGK + + G GV M GERA
Sbjct: 76 PSKFATCFLHYRAWVQGSLHKFEDTWQEQHPIELVIGKEKKQMSGLGIGVGNMRSGERAL 135
Query: 275 LTCSPDYAYGQQGHPGV--IPPNSTLIFDVELL 367
L + YG++G +PP + L+++VEL+
Sbjct: 136 LHVGWELGYGKEGSFSFPNVPPMADLLYEVELI 168
>09_01_0020 +
413723-413738,413867-413934,414849-415144,415275-415400,
415484-415566,416514-416628,416755-416847,416963-417021,
417609-417684,417812-417901,418050-418202,418294-418480,
418752-418839,419077-419125,419233-419329
Length = 531
Score = 41.9 bits (94), Expect = 5e-04
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +2
Query: 77 VQGD-ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKM 253
V+G+ ++ G+ V V Y G L NG+ D + FR+G M
Sbjct: 440 VEGNAKAKVASKGKQVCVRYCGRLINGEVIDPTNLDDDTHTFRLG--------------M 485
Query: 254 SVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE 376
VG + +LT P YG P IP NS L+++VELL ++
Sbjct: 486 RVGGKRRLTIPPAQGYGDVATP-KIPANSWLVYEVELLEVK 525
>12_01_0295 +
2235209-2235263,2236182-2236361,2236478-2236567,
2236947-2237131,2237200-2237358,2237437-2237589,
2237938-2238264
Length = 382
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Frame = +2
Query: 101 PKSGQTVVVHYTGTLTNGK-KFDSSRDRGKPFKFRIGKSEV-IRGWDEGVAKMSVGERAK 274
P T VHY + KF+ + + +GK + + G GV+ M GERA
Sbjct: 71 PSRFATCFVHYRAWVQGSSHKFEDTWQEQHSIELVLGKEKKEMTGLGIGVSNMRSGERAL 130
Query: 275 LTCSPDYAYGQQGHPGV--IPPNSTLIFDVELLRLE*IQFVTK 397
L + + YG++G +PP + L+++VEL+ + ++ V +
Sbjct: 131 LHVNWELGYGKEGSFSFPNVPPMADLVYEVELIGFDDVKEVPR 173
>07_01_0246 +
1809762-1809803,1810383-1810557,1810678-1810763,
1810871-1810921,1811003-1811146,1811299-1811343,
1811578-1811633,1811744-1811819,1811908-1812006
Length = 257
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 191 FKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNST 343
FKF+IG +VI ++E ++ M+ G ++ PD Y + + P +T
Sbjct: 173 FKFKIGSGQVIPAFEEAISDMAPGGVRRIIVPPDLGYPDNDYNKLGPKPTT 223
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 33.5 bits (73), Expect = 0.17
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
Frame = +2
Query: 101 PKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI----GKSEVI----RGWDEGVAKMS 256
PK GQ V+ HY G +G++ DS+ +G R GK +I G + V K
Sbjct: 77 PKDGQQVIFHYVGYNESGRRIDSTYIQGFEEGIRDMKPGGKRRIIIPPELGPPDTVGKAL 136
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE*IQFVTKNYYNIIVMS 424
+ + + +A G +FD+ELL ++ Q T +Y+ +V S
Sbjct: 137 LKISSIIKIEDVFAGTLVGPSTFFSAKQFEVFDIELLAVQDCQRRTIAFYSDVVCS 192
>01_05_0372 +
21541220-21541457,21541832-21541912,21542027-21542092,
21543050-21543178,21544619-21544674,21545451-21545732
Length = 283
Score = 33.5 bits (73), Expect = 0.17
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +2
Query: 251 MSVGERAKLTCSPDYAYGQQGHPGVIP----PNSTLIFDVELLRLE*IQFVTKN 400
M GERA T P A + G P IP P TL F++EL+ L I + +N
Sbjct: 1 MRPGERAIFTIPPKLAITKSGSPASIPSSIPPEQTLRFEIELISLFAITDILEN 54
Score = 32.3 bits (70), Expect = 0.39
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = +2
Query: 116 TVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDY 295
TV+V+Y L +G +S + + + + ++ V M GE A P Y
Sbjct: 77 TVIVNYNACLEDG----NSVSKSERLELNLASRTALK---YAVKTMREGEEAIFIVKPRY 129
Query: 296 AYGQQGH-----PGVIPPNSTLIFDVEL 364
A+G QG +PP++TL V+L
Sbjct: 130 AFGAQGRDSTGDQAAVPPDATLYLYVQL 157
>01_06_0158 -
27079262-27079346,27079662-27079750,27080540-27080659,
27080738-27080894,27081167-27081231,27081323-27081436,
27082109-27082178,27082412-27082642,27082963-27083039,
27083143-27083237,27084514-27084574,27084678-27085073
Length = 519
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 83 GDESTYPKSGQTVVVHY-TGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGW 232
G STY K+G+ +HY TG ++ DS + K ++ S+V+ W
Sbjct: 144 GQSSTYKKNGKPASIHYGTGAISGYFSQDSVKVGDVAVKNQLRGSQVLHSW 194
>08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,
4695422-4696072,4696179-4696395,4697040-4697111,
4697167-4697257,4697367-4698363,4698914-4699044,
4699584-4699802,4700110-4700805,4700912-4701121,
4701606-4701710
Length = 1271
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 242 VAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTL 346
+AK+ VGE + CSP+ +Y + H GVI +T+
Sbjct: 922 LAKLEVGEFCSV-CSPNCSYLTRKHLGVIASRATM 955
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,481,972
Number of Sequences: 37544
Number of extensions: 353018
Number of successful extensions: 810
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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