Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0848
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...   173   3e-45
AY752910-1|AAV30084.1|  250|Anopheles gambiae peroxidase 15 prot...    24   4.1  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   4.1  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    24   4.1  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    24   5.4  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   9.4  

>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score =  173 bits (422), Expect = 3e-45
 Identities = 76/98 (77%), Positives = 86/98 (87%)
 Frame = +2

Query: 83  GDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVG 262
           GD++T+PK GQT VVHYTGTL +G  FDSSR RGKPFKF +GK EVIRGWDEGVA+MSVG
Sbjct: 11  GDQTTFPKPGQTAVVHYTGTLDDGTVFDSSRTRGKPFKFSVGKGEVIRGWDEGVAQMSVG 70

Query: 263 ERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE 376
           +RAKL CSPDYAYG +GHPGVIPPN+ L FDVELLR+E
Sbjct: 71  QRAKLVCSPDYAYGSRGHPGVIPPNARLTFDVELLRVE 108


>AY752910-1|AAV30084.1|  250|Anopheles gambiae peroxidase 15
           protein.
          Length = 250

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 396 LVTNCIYSRRRSSTSKISVELGGMTPGW 313
           LV  C+++      ++I+ ELG + P W
Sbjct: 42  LVLTCMHTLLAREHNRIATELGKINPHW 69


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 322 SHTSQLYTYFRCRTSTSRINTICNQKLLQHHCYVNCP 432
           SHT Q      C  S SRI+T+ +   ++H   +N P
Sbjct: 545 SHTPQRSLCPYCPASYSRIDTLRSHLRIKHADRLNAP 581


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 322 SHTSQLYTYFRCRTSTSRINTICNQKLLQHHCYVNCP 432
           SHT Q      C  S SRI+T+ +   ++H   +N P
Sbjct: 521 SHTPQRSLCPYCPASYSRIDTLRSHLRIKHADRLNAP 557


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 386 FVTKNYYNIIVMSIAL*NSKSQLITLFFIT 475
           FVT    N IV+ I   N + + +T FFIT
Sbjct: 147 FVTAVIGNSIVLFIVQSNPRMRTVTNFFIT 176


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 110 LIWGRSTRLPGLIVSTVTPIIYNVFLY 30
           L+ G S  L  L+     P++Y VFLY
Sbjct: 918 LMIGCSVLLTPLLSHIPMPVLYGVFLY 944


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 724,094
Number of Sequences: 2352
Number of extensions: 15045
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)