Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0848
(706 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 142 2e-34
AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 142 2e-34
Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 113 1e-25
AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 104 7e-23
Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical pr... 102 3e-22
AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding... 76 2e-14
U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 68 6e-12
U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 68 6e-12
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 64 7e-11
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 29 4.3
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 29 4.3
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z73969-8|CAA98239.1| 351|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z81565-3|CAH60773.1| 489|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81565-2|CAB04581.1| 507|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81100-1|CAB03194.1| 331|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81553-1|CAB04490.2| 327|Caenorhabditis elegans Hypothetical pr... 27 9.9
>U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein.
Length = 108
Score = 142 bits (345), Expect = 2e-34
Identities = 65/100 (65%), Positives = 79/100 (79%)
Frame = +2
Query: 68 KLSVQGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVA 247
++ V+GD T PK+GQTV HY TL NGKK DSSRDRG PFKF+IGK EVI+GWD+GVA
Sbjct: 6 QILVEGDNVTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGWDQGVA 65
Query: 248 KMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 367
+MSVGE++KLT S D YG +G P IP N+TL+F+VELL
Sbjct: 66 QMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELL 105
>AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical
protein Y18D10A.19 protein.
Length = 108
Score = 142 bits (345), Expect = 2e-34
Identities = 65/100 (65%), Positives = 79/100 (79%)
Frame = +2
Query: 68 KLSVQGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVA 247
++ V+GD T PK+GQTV HY TL NGKK DSSRDRG PFKF+IGK EVI+GWD+GVA
Sbjct: 6 QILVEGDNVTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGWDQGVA 65
Query: 248 KMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 367
+MSVGE++KLT S D YG +G P IP N+TL+F+VELL
Sbjct: 66 QMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELL 105
>Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical
protein F31D4.3 protein.
Length = 431
Score = 113 bits (272), Expect = 1e-25
Identities = 56/102 (54%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Frame = +2
Query: 62 LLKL-SVQGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDE 238
+LKL +G P +G TV VHY GTL NG KFDSSRDRG F F +G+ VI+GWD
Sbjct: 16 VLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDL 75
Query: 239 GVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVEL 364
GVA M+ GE A+ T DY YG G P IP +TLIF+VEL
Sbjct: 76 GVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVEL 117
>AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical
protein Y18D10A.25 protein.
Length = 290
Score = 104 bits (249), Expect = 7e-23
Identities = 56/115 (48%), Positives = 71/115 (61%), Gaps = 6/115 (5%)
Frame = +2
Query: 5 RRGSLSRKNREIHCK*WVLLLKLSV------QGDESTYPKSGQTVVVHYTGTLTNGKKFD 166
R SL+ K R +C W K+ V QGD T K+GQTV HY L +G K D
Sbjct: 176 RNASLTCKVRLFNCS-WDSYAKIGVDRQILVQGDNVTKSKNGQTVTCHYVLILVDGTKID 234
Query: 167 SSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIP 331
SSRDR PFKF+IGK EVI+GWD+GVA+MSV E++KLT +P + + + P IP
Sbjct: 235 SSRDRETPFKFKIGKGEVIKGWDQGVAQMSVKEKSKLTIAPAFGFEKGKLPAGIP 289
Score = 57.6 bits (133), Expect = 8e-09
Identities = 34/88 (38%), Positives = 46/88 (52%)
Frame = +2
Query: 101 PKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLT 280
P++GQ V + L + S+ + P F+IG EVI G D G+ KM VGE A
Sbjct: 99 PENGQLVQCYIEIKLADCYTSWSNYESQNPIIFKIGFGEVIPGLDIGIPKMKVGEIATFH 158
Query: 281 CSPDYAYGQQGHPGVIPPNSTLIFDVEL 364
S Y YG+ G G+IP N++L V L
Sbjct: 159 VSGKYGYGRAGFRGLIPRNASLTCKVRL 186
>Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical
protein F36H1.1 protein.
Length = 139
Score = 102 bits (244), Expect = 3e-22
Identities = 45/91 (49%), Positives = 62/91 (68%)
Frame = +2
Query: 104 KSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTC 283
+ G + +HYTGTL +G +FDSSR R + F F +G+ VI+GWD+G+ M VGER LT
Sbjct: 43 RKGDQLHMHYTGTLLDGTEFDSSRTRNEEFTFTLGQGNVIKGWDQGLLNMCVGERRILTI 102
Query: 284 SPDYAYGQQGHPGVIPPNSTLIFDVELLRLE 376
P YG++G P IP NS L FDVEL++++
Sbjct: 103 PPHLGYGERGAPPKIPGNSVLKFDVELMKID 133
>AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding
protein family protein3 protein.
Length = 261
Score = 76.2 bits (179), Expect = 2e-14
Identities = 37/90 (41%), Positives = 53/90 (58%)
Frame = +2
Query: 104 KSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTC 283
++G T+ YT L +G DSS R +PF F++G +VI+G D + M GE+ K+
Sbjct: 164 QAGDTLHQQYTLNLEDGSFIDSSWSRNRPFIFKMGSGQVIKGMDIAMEGMCQGEKRKVVI 223
Query: 284 SPDYAYGQQGHPGVIPPNSTLIFDVELLRL 373
P+ AYG+ G P IP NS L FD+ L +L
Sbjct: 224 PPELAYGENGRPPAIPGNSYLHFDLSLEKL 253
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/87 (32%), Positives = 43/87 (49%)
Frame = +2
Query: 104 KSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTC 283
+SG + Y + GK S+ + KP+ F +GK EVI G + + M VGE+ K+
Sbjct: 46 ESGDQLEQFYKLSDKEGKVIGSNFGQ-KPYTFTLGKGEVIHGMEIAMEGMCVGEQRKVII 104
Query: 284 SPDYAYGQQGHPGVIPPNSTLIFDVEL 364
P+ + + G V TL + VEL
Sbjct: 105 PPEQGFDEDGDE-VEGKGETLYYFVEL 130
>U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform a protein.
Length = 264
Score = 68.1 bits (159), Expect = 6e-12
Identities = 35/99 (35%), Positives = 50/99 (50%)
Frame = +2
Query: 77 VQGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMS 256
+ D+ KSG T+ Y L +G DSS R PF F++ +EVI+G D + M
Sbjct: 160 IDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGMC 219
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRL 373
GER ++ D+ YG G IP + L FD+ L +L
Sbjct: 220 EGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITLEKL 258
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 149 NGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHP-GV 325
+GK+ S+ ++ KP+ F +GK +VI G + + M GE+ K+ + +G +G
Sbjct: 63 DGKEIGSNFNK-KPYTFTLGKGQVIPGMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDN 121
Query: 326 IPPNSTLIFDVELLRL 373
I + TL + V+L+ L
Sbjct: 122 IKEDQTLYYTVQLVDL 137
>U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform b protein.
Length = 300
Score = 68.1 bits (159), Expect = 6e-12
Identities = 35/99 (35%), Positives = 50/99 (50%)
Frame = +2
Query: 77 VQGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMS 256
+ D+ KSG T+ Y L +G DSS R PF F++ +EVI+G D + M
Sbjct: 196 IDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGMC 255
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRL 373
GER ++ D+ YG G IP + L FD+ L +L
Sbjct: 256 EGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITLEKL 294
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 149 NGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHP-GV 325
+GK+ S+ ++ KP+ F +GK +VI G + + M GE+ K+ + +G +G
Sbjct: 99 DGKEIGSNFNK-KPYTFTLGKGQVIPGMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDN 157
Query: 326 IPPNSTLIFDVELLRL 373
I + TL + V+L+ L
Sbjct: 158 IKEDQTLYYTVQLVDL 173
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 64.5 bits (150), Expect = 7e-11
Identities = 33/99 (33%), Positives = 49/99 (49%)
Frame = +2
Query: 77 VQGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMS 256
++ D+ ++G + Y L + DSS R PF FR+ EVI G D + M
Sbjct: 155 IEADKCKKAEAGDKIYQQYVLRLEDNTLVDSSYSRNAPFVFRLRNREVIDGMDIAMDGMC 214
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRL 373
GER ++ +Y YG QG P IP + L F++ L +L
Sbjct: 215 EGERRRVVIPSEYGYGSQGSPPEIPGGARLFFEIVLEKL 253
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 74 SVQGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGK-PFKFRIGKSEVIRGWDEGVAK 250
S+ E +G VV Y LT+ K + + GK P+ F +G+++VI G D +
Sbjct: 39 SIDESECEIKSAGGDVVDQYY-KLTDEKGVEIGSNFGKKPYTFTLGRNQVIPGMDRAMRG 97
Query: 251 MSVGERAKLTCSPDYAYGQ 307
M +GE K+ P + +
Sbjct: 98 MCIGEIRKVVIPPKLGFAK 116
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 89 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 205
EST + VHY T+G K D S G+P KFR+
Sbjct: 190 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 228
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 89 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 205
EST + VHY T+G K D S G+P KFR+
Sbjct: 205 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 243
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 89 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 205
EST + VHY T+G K D S G+P KFR+
Sbjct: 205 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 243
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 89 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 205
EST + VHY T+G K D S G+P KFR+
Sbjct: 190 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 228
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 89 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 205
EST + VHY T+G K D S G+P KFR+
Sbjct: 205 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 243
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 89 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 205
EST + VHY T+G K D S G+P KFR+
Sbjct: 205 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 243
>Z73969-8|CAA98239.1| 351|Caenorhabditis elegans Hypothetical
protein C12D8.12 protein.
Length = 351
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -2
Query: 606 FRISFISLTINLFTYNMKFLRIA*IYIYFHYKYT 505
F F SL F Y K L+ +IYFH KYT
Sbjct: 94 FYFFFASLISVHFVYRYKALKYGSKWIYFHGKYT 127
>Z81565-3|CAH60773.1| 489|Caenorhabditis elegans Hypothetical
protein K06G5.1b protein.
Length = 489
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +2
Query: 140 TLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHP 319
TL NGK D+S K F + S + + + V SP+ YG G
Sbjct: 88 TLYNGKVADNST---KITTFTVADSGTTKSYTSSTQYIYVEYTQDNATSPNAYYGSIGAG 144
Query: 320 GVIPPNS 340
G++PP++
Sbjct: 145 GLLPPST 151
>Z81565-2|CAB04581.1| 507|Caenorhabditis elegans Hypothetical
protein K06G5.1a protein.
Length = 507
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +2
Query: 140 TLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHP 319
TL NGK D+S K F + S + + + V SP+ YG G
Sbjct: 88 TLYNGKVADNST---KITTFTVADSGTTKSYTSSTQYIYVEYTQDNATSPNAYYGSIGAG 144
Query: 320 GVIPPNS 340
G++PP++
Sbjct: 145 GLLPPST 151
>Z81100-1|CAB03194.1| 331|Caenorhabditis elegans Hypothetical
protein K08G2.7 protein.
Length = 331
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +1
Query: 454 YHIIFYHILSLKSLYQHCVFIVEIYIYLCY 543
YHII+Y ++++K +Y +F + I+ + Y
Sbjct: 62 YHIIYYFVVTVKRMYALQLFQLTIFPAIAY 91
>Z81553-1|CAB04490.2| 327|Caenorhabditis elegans Hypothetical
protein F56H6.1 protein.
Length = 327
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 615 SMIFRISFISLTINLFTYNMKFLRIA*IYIYF 520
+++ ++ +L +FTY KFL A +Y YF
Sbjct: 12 ALLALVTVAALNYQIFTYQRKFLMPAELYTYF 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,027,317
Number of Sequences: 27780
Number of extensions: 340659
Number of successful extensions: 816
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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