Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0846
         (630 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032555-1|AAH32555.1|  823|Homo sapiens neuroligin 1 protein.         31   2.5  
AB028993-1|BAA83022.2|  826|Homo sapiens KIAA1070 protein protein.     31   2.5  
BC024591-1|AAH24591.1| 1222|Homo sapiens histidine acid phosphat...    31   4.5  
AB007893-1|BAA24863.2| 1255|Homo sapiens KIAA0433 protein.             31   4.5  
U08023-1|AAB60430.1|  999|Homo sapiens c-mer protein.                  30   7.8  
BC114918-1|AAI14919.1|  823|Homo sapiens MERTK protein protein.        30   7.8  
BC114917-1|AAI14918.1|  823|Homo sapiens MERTK protein protein.        30   7.8  
AF260529-1|AAG33129.1|  978|Homo sapiens MER receptor tyrosine k...    30   7.8  
AC104651-1|AAX93144.1|  432|Homo sapiens unknown protein.              30   7.8  

>BC032555-1|AAH32555.1|  823|Homo sapiens neuroligin 1 protein.
          Length = 823

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
 Frame = +3

Query: 222 LGIPEADDPW-KKIVEASPPDSIWHSLRNCVAYQAGVWQNLITKGIDDVMQPAAF--KLA 392
           LG+P A  P  ++  +   P S W  +RN   +     QN+I   + +VM P  F   L 
Sbjct: 81  LGVPYAAPPTGERRFQPPEPPSPWSDIRNATQFAPVCPQNIIDGRLPEVMLPVWFTNNLD 140

Query: 393 IVLRHT--PTEDCAKL 434
           +V  +    +EDC  L
Sbjct: 141 VVSSYVQDQSEDCLYL 156


>AB028993-1|BAA83022.2|  826|Homo sapiens KIAA1070 protein protein.
          Length = 826

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
 Frame = +3

Query: 222 LGIPEADDPW-KKIVEASPPDSIWHSLRNCVAYQAGVWQNLITKGIDDVMQPAAF--KLA 392
           LG+P A  P  ++  +   P S W  +RN   +     QN+I   + +VM P  F   L 
Sbjct: 84  LGVPYAAPPTGERRFQPPEPPSPWSDIRNATQFAPVCPQNIIDGRLPEVMLPVWFTNNLD 143

Query: 393 IVLRHT--PTEDCAKL 434
           +V  +    +EDC  L
Sbjct: 144 VVSSYVQDQSEDCLYL 159


>BC024591-1|AAH24591.1| 1222|Homo sapiens histidine acid phosphatase
           domain containing 1 protein.
          Length = 1222

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = -1

Query: 198 YAPPSNLDAQGMTLPYSILPTN*ALVPVYTRPDRFRRADVTKYTTADGSVGR 43
           Y+P SN+   G  +    +PT+   V VYT    +  A+  K    DG V R
Sbjct: 222 YSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVER 273


>AB007893-1|BAA24863.2| 1255|Homo sapiens KIAA0433 protein.
          Length = 1255

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = -1

Query: 198 YAPPSNLDAQGMTLPYSILPTN*ALVPVYTRPDRFRRADVTKYTTADGSVGR 43
           Y+P SN+   G  +    +PT+   V VYT    +  A+  K    DG V R
Sbjct: 234 YSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVER 285


>U08023-1|AAB60430.1|  999|Homo sapiens c-mer protein.
          Length = 999

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +3

Query: 111 YKLEQALNLWGESSMGVSCPERQGCSAERIWYAACTTLGIP 233
           Y+++Q L      S+GVSC    G SA   W  A TT G P
Sbjct: 344 YQIKQ-LQALANYSIGVSCMNEIGWSAVSPWILASTTEGAP 383


>BC114918-1|AAI14919.1|  823|Homo sapiens MERTK protein protein.
          Length = 823

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +3

Query: 111 YKLEQALNLWGESSMGVSCPERQGCSAERIWYAACTTLGIP 233
           Y+++Q L      S+GVSC    G SA   W  A TT G P
Sbjct: 168 YQIKQ-LQALANYSIGVSCMNEIGWSAVSPWILASTTEGAP 207


>BC114917-1|AAI14918.1|  823|Homo sapiens MERTK protein protein.
          Length = 823

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +3

Query: 111 YKLEQALNLWGESSMGVSCPERQGCSAERIWYAACTTLGIP 233
           Y+++Q L      S+GVSC    G SA   W  A TT G P
Sbjct: 168 YQIKQ-LQALANYSIGVSCMNEIGWSAVSPWILASTTEGAP 207


>AF260529-1|AAG33129.1|  978|Homo sapiens MER receptor tyrosine
           kinase protein.
          Length = 978

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +3

Query: 111 YKLEQALNLWGESSMGVSCPERQGCSAERIWYAACTTLGIP 233
           Y+++Q L      S+GVSC    G SA   W  A TT G P
Sbjct: 323 YQIKQ-LQALANYSIGVSCMNEIGWSAVSPWILASTTEGAP 362


>AC104651-1|AAX93144.1|  432|Homo sapiens unknown protein.
          Length = 432

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +3

Query: 111 YKLEQALNLWGESSMGVSCPERQGCSAERIWYAACTTLGIP 233
           Y+++Q L      S+GVSC    G SA   W  A TT G P
Sbjct: 344 YQIKQ-LQALANYSIGVSCMNEIGWSAVSPWILASTTEGAP 383


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,864,252
Number of Sequences: 237096
Number of extensions: 1983913
Number of successful extensions: 6290
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6290
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)