Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0845
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire prot...    29   4.1  
EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire prot...    29   4.1  
EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire prot...    29   4.1  
AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA...    29   4.1  
AY071247-1|AAL48869.1|  504|Drosophila melanogaster RE28850p pro...    28   9.6  
AE014296-341|AAF47557.1|  504|Drosophila melanogaster CG18173-PA...    28   9.6  

>EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire
           protein.
          Length = 1396

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 288 AHRHLQCKCTTHLEI*VLSSQYSYNGCPTIKP 383
           AH HLQ KC    E+     + ++NG P++ P
Sbjct: 50  AHEHLQWKCVAEFEL--CLEEIAFNGTPSLGP 79


>EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire
           protein.
          Length = 1437

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 288 AHRHLQCKCTTHLEI*VLSSQYSYNGCPTIKP 383
           AH HLQ KC    E+     + ++NG P++ P
Sbjct: 50  AHEHLQWKCVAEFEL--CLEEIAFNGTPSLGP 79


>EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire
           protein.
          Length = 1659

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 288 AHRHLQCKCTTHLEI*VLSSQYSYNGCPTIKP 383
           AH HLQ KC    E+     + ++NG P++ P
Sbjct: 272 AHEHLQWKCVAEFEL--CLEEIAFNGTPSLGP 301


>AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA
           protein.
          Length = 1782

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 288 AHRHLQCKCTTHLEI*VLSSQYSYNGCPTIKP 383
           AH HLQ KC    E+     + ++NG P++ P
Sbjct: 234 AHEHLQWKCVAEFEL--CLEEIAFNGTPSLGP 263


>AY071247-1|AAL48869.1|  504|Drosophila melanogaster RE28850p
           protein.
          Length = 504

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -3

Query: 375 WWGSRCNYTESLELISQDGWCIYIVDV 295
           WWG+     ESL LI    WCI +  V
Sbjct: 44  WWGTLVQSGESLLLILSTLWCILLARV 70


>AE014296-341|AAF47557.1|  504|Drosophila melanogaster CG18173-PA
           protein.
          Length = 504

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -3

Query: 375 WWGSRCNYTESLELISQDGWCIYIVDV 295
           WWG+     ESL LI    WCI +  V
Sbjct: 44  WWGTLVQSGESLLLILSTLWCILLARV 70


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,156,873
Number of Sequences: 53049
Number of extensions: 583097
Number of successful extensions: 1145
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)