Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0842
(613 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 252 1e-66
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 252 1e-66
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 252 1e-66
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 252 1e-66
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 252 1e-66
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 252 1e-66
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 248 9e-66
AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens ... 78 2e-14
AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein. 31 4.2
BX119957-17|CAM25921.1| 433|Homo sapiens chromosome 6 open read... 30 7.4
BC064397-1|AAH64397.1| 433|Homo sapiens C6orf136 protein protein. 30 7.4
AL732442-10|CAI17760.2| 433|Homo sapiens chromosome 6 open read... 30 7.4
AL662800-21|CAI95540.2| 433|Homo sapiens chromosome 6 open read... 30 7.4
AL662798-7|CAI95541.2| 433|Homo sapiens chromosome 6 open readi... 30 7.4
BC077726-1|AAH77726.1| 1151|Homo sapiens sema domain, seven thro... 29 9.8
AB040878-1|BAA95969.1| 1202|Homo sapiens KIAA1445 protein protein. 29 9.8
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 252 bits (616), Expect = 1e-66
Identities = 112/153 (73%), Positives = 135/153 (88%)
Frame = +2
Query: 14 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 193
+P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGG
Sbjct: 7 DPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGG 66
Query: 194 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 373
VGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +R
Sbjct: 67 VGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMR 126
Query: 374 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 472
RRTYRAHGRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 252 bits (616), Expect = 1e-66
Identities = 112/153 (73%), Positives = 135/153 (88%)
Frame = +2
Query: 14 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 193
+P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGG
Sbjct: 7 DPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGG 66
Query: 194 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 373
VGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +R
Sbjct: 67 VGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMR 126
Query: 374 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 472
RRTYRAHGRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 252 bits (616), Expect = 1e-66
Identities = 112/153 (73%), Positives = 135/153 (88%)
Frame = +2
Query: 14 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 193
+P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGG
Sbjct: 7 DPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGG 66
Query: 194 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 373
VGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +R
Sbjct: 67 VGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMR 126
Query: 374 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 472
RRTYRAHGRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 252 bits (616), Expect = 1e-66
Identities = 112/153 (73%), Positives = 135/153 (88%)
Frame = +2
Query: 14 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 193
+P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGG
Sbjct: 7 DPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGG 66
Query: 194 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 373
VGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +R
Sbjct: 67 VGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMR 126
Query: 374 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 472
RRTYRAHGRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 252 bits (616), Expect = 1e-66
Identities = 112/153 (73%), Positives = 135/153 (88%)
Frame = +2
Query: 14 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 193
+P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGG
Sbjct: 7 DPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGG 66
Query: 194 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 373
VGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +R
Sbjct: 67 VGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMR 126
Query: 374 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 472
RRTYRAHGRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 252 bits (616), Expect = 1e-66
Identities = 112/153 (73%), Positives = 135/153 (88%)
Frame = +2
Query: 14 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 193
+P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGG
Sbjct: 7 DPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGG 66
Query: 194 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 373
VGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +R
Sbjct: 67 VGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMR 126
Query: 374 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 472
RRTYRAHGRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 248 bits (608), Expect = 9e-66
Identities = 111/153 (72%), Positives = 134/153 (87%)
Frame = +2
Query: 14 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 193
+P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGG
Sbjct: 7 DPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGG 66
Query: 194 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 373
VGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +R
Sbjct: 67 VGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMR 126
Query: 374 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 472
RRTYRA GRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRARGRINPYMSSPCHIEMILTEKEQIVPK 159
>AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ27083 fis, clone SPL03425. ).
Length = 136
Score = 78.2 bits (184), Expect = 2e-14
Identities = 36/70 (51%), Positives = 51/70 (72%)
Frame = +2
Query: 245 PKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 424
PK+ F L+ +SNA+ K LD+D L+I+ IQVN+AP + TYRAHG+INPY++S
Sbjct: 21 PKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYRAHGQINPYVTSA 79
Query: 425 CHIEVCLSER 454
CHIE+ L+E+
Sbjct: 80 CHIEMILTEK 89
>AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein.
Length = 198
Score = 30.7 bits (66), Expect = 4.2
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 319 RGQASHRPHSGKSRALPTQTYIPCSRAHQPLHVVSLPHR-SMSQRTRR 459
R +S R HS S+ L +Q++ P SR+H P PH S S R+ R
Sbjct: 89 RACSSRRAHSSWSQNLHSQSHSPHSRSHSPHSRSHSPHSWSHSLRSSR 136
>BX119957-17|CAM25921.1| 433|Homo sapiens chromosome 6 open reading
frame 136 protein.
Length = 433
Score = 29.9 bits (64), Expect = 7.4
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 316 GRGQASHRPHSGKSRALPTQTYIPCSRAHQPLHVVSLPHRSMSQRTRRCCRQG 474
GRG+ P + SR+ P QT P R QP ++L RS + C R G
Sbjct: 67 GRGREIRSPAAAPSRSSPAQTR-PAGRPQQPAR-LALGERSWQEGRPVCTRFG 117
>BC064397-1|AAH64397.1| 433|Homo sapiens C6orf136 protein protein.
Length = 433
Score = 29.9 bits (64), Expect = 7.4
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 316 GRGQASHRPHSGKSRALPTQTYIPCSRAHQPLHVVSLPHRSMSQRTRRCCRQG 474
GRG+ P + SR+ P QT P R QP ++L RS + C R G
Sbjct: 67 GRGREIRSPAAAPSRSSPAQTR-PAGRPQQPAR-LALGERSWQEGRPVCTRFG 117
>AL732442-10|CAI17760.2| 433|Homo sapiens chromosome 6 open reading
frame 136 protein.
Length = 433
Score = 29.9 bits (64), Expect = 7.4
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 316 GRGQASHRPHSGKSRALPTQTYIPCSRAHQPLHVVSLPHRSMSQRTRRCCRQG 474
GRG+ P + SR+ P QT P R QP ++L RS + C R G
Sbjct: 67 GRGREIRSPAAAPSRSSPAQTR-PAGRPQQPAR-LALGERSWQEGRPVCTRFG 117
>AL662800-21|CAI95540.2| 433|Homo sapiens chromosome 6 open reading
frame 136 protein.
Length = 433
Score = 29.9 bits (64), Expect = 7.4
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 316 GRGQASHRPHSGKSRALPTQTYIPCSRAHQPLHVVSLPHRSMSQRTRRCCRQG 474
GRG+ P + SR+ P QT P R QP ++L RS + C R G
Sbjct: 67 GRGREIRSPAAAPSRSSPAQTR-PAGRPQQPAR-LALGERSWQEGRPVCTRFG 117
>AL662798-7|CAI95541.2| 433|Homo sapiens chromosome 6 open reading
frame 136 protein.
Length = 433
Score = 29.9 bits (64), Expect = 7.4
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 316 GRGQASHRPHSGKSRALPTQTYIPCSRAHQPLHVVSLPHRSMSQRTRRCCRQG 474
GRG+ P + SR+ P QT P R QP ++L RS + C R G
Sbjct: 67 GRGREIRSPAAAPSRSSPAQTR-PAGRPQQPAR-LALGERSWQEGRPVCTRFG 117
>BC077726-1|AAH77726.1| 1151|Homo sapiens sema domain, seven
thrombospondin repeats (type 1 and type 1-like),
transmembra protein.
Length = 1151
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 425 RETTCRG*CAREHGMYVCVGRARDLPECGR*LACPRPKF 309
R+ +C R HG +CVG++R+ C CP P F
Sbjct: 687 RQRSCSNPAPR-HGGRICVGKSREERFCNENTPCPVPIF 724
>AB040878-1|BAA95969.1| 1202|Homo sapiens KIAA1445 protein protein.
Length = 1202
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 425 RETTCRG*CAREHGMYVCVGRARDLPECGR*LACPRPKF 309
R+ +C R HG +CVG++R+ C CP P F
Sbjct: 738 RQRSCSNPAPR-HGGRICVGKSREERFCNENTPCPVPIF 775
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,298,760
Number of Sequences: 237096
Number of extensions: 1762584
Number of successful extensions: 7926
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7926
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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