BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0842 (613 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY060845-1|AAL28393.1| 186|Drosophila melanogaster GM02242p pro... 278 5e-75 AE014298-945|AAN09183.1| 186|Drosophila melanogaster CG3203-PD,... 278 5e-75 AE014298-944|AAF46194.1| 186|Drosophila melanogaster CG3203-PC,... 278 5e-75 AE014298-943|AAN09182.1| 186|Drosophila melanogaster CG3203-PB,... 278 5e-75 AE014298-942|AAF46195.1| 186|Drosophila melanogaster CG3203-PA,... 278 5e-75 AY094778-1|AAM11131.1| 570|Drosophila melanogaster LD09231p pro... 32 0.70 AE014297-2310|AAF55387.2| 570|Drosophila melanogaster CG5175-PB... 32 0.70 AE014297-2309|AAN13733.1| 570|Drosophila melanogaster CG5175-PA... 32 0.70 >AY060845-1|AAL28393.1| 186|Drosophila melanogaster GM02242p protein. Length = 186 Score = 278 bits (681), Expect = 5e-75 Identities = 129/162 (79%), Positives = 144/162 (88%) Frame = +2 Query: 14 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 193 E DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PFRRFNGG Sbjct: 7 ESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPFRRFNGG 66 Query: 194 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 373 VGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVNRA CLR Sbjct: 67 VGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVNRAQCLR 126 Query: 374 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPA 499 RRTYRAHGRINPYMSSPCH+EV L+E+E+ V++ TDD PA Sbjct: 127 RRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPA 166 >AE014298-945|AAN09183.1| 186|Drosophila melanogaster CG3203-PD, isoform D protein. Length = 186 Score = 278 bits (681), Expect = 5e-75 Identities = 129/162 (79%), Positives = 144/162 (88%) Frame = +2 Query: 14 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 193 E DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PFRRFNGG Sbjct: 7 ESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPFRRFNGG 66 Query: 194 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 373 VGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVNRA CLR Sbjct: 67 VGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVNRAQCLR 126 Query: 374 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPA 499 RRTYRAHGRINPYMSSPCH+EV L+E+E+ V++ TDD PA Sbjct: 127 RRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPA 166 >AE014298-944|AAF46194.1| 186|Drosophila melanogaster CG3203-PC, isoform C protein. Length = 186 Score = 278 bits (681), Expect = 5e-75 Identities = 129/162 (79%), Positives = 144/162 (88%) Frame = +2 Query: 14 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 193 E DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PFRRFNGG Sbjct: 7 ESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPFRRFNGG 66 Query: 194 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 373 VGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVNRA CLR Sbjct: 67 VGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVNRAQCLR 126 Query: 374 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPA 499 RRTYRAHGRINPYMSSPCH+EV L+E+E+ V++ TDD PA Sbjct: 127 RRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPA 166 >AE014298-943|AAN09182.1| 186|Drosophila melanogaster CG3203-PB, isoform B protein. Length = 186 Score = 278 bits (681), Expect = 5e-75 Identities = 129/162 (79%), Positives = 144/162 (88%) Frame = +2 Query: 14 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 193 E DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PFRRFNGG Sbjct: 7 ESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPFRRFNGG 66 Query: 194 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 373 VGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVNRA CLR Sbjct: 67 VGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVNRAQCLR 126 Query: 374 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPA 499 RRTYRAHGRINPYMSSPCH+EV L+E+E+ V++ TDD PA Sbjct: 127 RRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPA 166 >AE014298-942|AAF46195.1| 186|Drosophila melanogaster CG3203-PA, isoform A protein. Length = 186 Score = 278 bits (681), Expect = 5e-75 Identities = 129/162 (79%), Positives = 144/162 (88%) Frame = +2 Query: 14 EPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGG 193 E DN AKSCKARG NLRVHFKNT+ETA AI++MPLRRA RYLK VI++KEC+PFRRFNGG Sbjct: 7 ESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPFRRFNGG 66 Query: 194 VGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLR 373 VGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD K LD DRLV+ HIQVNRA CLR Sbjct: 67 VGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVNRAQCLR 126 Query: 374 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPA 499 RRTYRAHGRINPYMSSPCH+EV L+E+E+ V++ TDD PA Sbjct: 127 RRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPA 166 >AY094778-1|AAM11131.1| 570|Drosophila melanogaster LD09231p protein. Length = 570 Score = 31.9 bits (69), Expect = 0.70 Identities = 15/51 (29%), Positives = 30/51 (58%) Frame = +1 Query: 256 RRIPLAVIEER*IKR*QQNFGRGQASHRPHSGKSRALPTQTYIPCSRAHQP 408 RR+PL++ + R QQ+ G S+ P +G + T++++P +++QP Sbjct: 23 RRLPLSLSGGSTVTRLQQSSGSNGRSNSPQNGNKKI--TESFLPVKKSNQP 71 >AE014297-2310|AAF55387.2| 570|Drosophila melanogaster CG5175-PB, isoform B protein. Length = 570 Score = 31.9 bits (69), Expect = 0.70 Identities = 15/51 (29%), Positives = 30/51 (58%) Frame = +1 Query: 256 RRIPLAVIEER*IKR*QQNFGRGQASHRPHSGKSRALPTQTYIPCSRAHQP 408 RR+PL++ + R QQ+ G S+ P +G + T++++P +++QP Sbjct: 23 RRLPLSLSGGSTVTRLQQSSGSNGRSNSPQNGNKKI--TESFLPVKKSNQP 71 >AE014297-2309|AAN13733.1| 570|Drosophila melanogaster CG5175-PA, isoform A protein. Length = 570 Score = 31.9 bits (69), Expect = 0.70 Identities = 15/51 (29%), Positives = 30/51 (58%) Frame = +1 Query: 256 RRIPLAVIEER*IKR*QQNFGRGQASHRPHSGKSRALPTQTYIPCSRAHQP 408 RR+PL++ + R QQ+ G S+ P +G + T++++P +++QP Sbjct: 23 RRLPLSLSGGSTVTRLQQSSGSNGRSNSPQNGNKKI--TESFLPVKKSNQP 71 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 26,835,445 Number of Sequences: 53049 Number of extensions: 562673 Number of successful extensions: 1705 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1645 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1705 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2497240350 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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