Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0836
(680 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 387 e-108
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 382 e-106
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 186 1e-47
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 182 2e-46
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.082
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 33 0.25
Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 29 4.1
L07144-11|AAM54163.1| 144|Caenorhabditis elegans Hypothetical p... 29 4.1
AL132865-7|CAB60598.1| 234|Caenorhabditis elegans Hypothetical ... 29 4.1
Z81097-17|CAF31479.2| 269|Caenorhabditis elegans Hypothetical p... 28 5.4
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 28 7.1
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 28 7.1
Z69788-7|CAM33502.1| 132|Caenorhabditis elegans Hypothetical pr... 27 9.4
U64836-6|AAG24056.2| 201|Caenorhabditis elegans Hypothetical pr... 27 9.4
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 27 9.4
U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms prot... 27 9.4
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 27 9.4
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 27 9.4
AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein. 27 9.4
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 387 bits (953), Expect = e-108
Identities = 174/215 (80%), Positives = 194/215 (90%)
Frame = +2
Query: 2 LKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETV 181
LKRLAKSDPMVQCI EESGEHI+AGAGELHLEICLKDLEEDHACIP+KKSDPVVSYRETV
Sbjct: 518 LKRLAKSDPMVQCIFEESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETV 577
Query: 182 AEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDV 361
ES+Q+CLSKSPNKHNRL AQPMPDGL +DI+ G VN RD+FK RA+ L EKYEYDV
Sbjct: 578 QSESNQICLSKSPNKHNRLHCTAQPMPDGLADDIEGGTVNARDEFKARAKILAEKYEYDV 637
Query: 362 TEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFN 541
TEARKIWCFGP+GTGPN+L+D +KGVQYLNEIKDSVVAGFQWA +EGV+++EN+RGVRFN
Sbjct: 638 TEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFN 697
Query: 542 IYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAHP 646
++DVTLH DAIHRGGGQIIPT RR YA +LTA P
Sbjct: 698 VHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEP 732
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 382 bits (939), Expect = e-106
Identities = 172/215 (80%), Positives = 193/215 (89%)
Frame = +2
Query: 2 LKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETV 181
LKRLAKSDPMVQCI EESGEHI+AGAGELHLEICLKDLEEDHACIP+KKSDPVVSYRETV
Sbjct: 518 LKRLAKSDPMVQCIFEESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETV 577
Query: 182 AEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDV 361
ES+Q+CLSKSPNKHNRL AQPMPDGL +DI+ G V+ RD+FK RA+Y EKYEY V
Sbjct: 578 QSESNQICLSKSPNKHNRLHCTAQPMPDGLADDIEGGTVSARDEFKARAKYPGEKYEYAV 637
Query: 362 TEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFN 541
TEARKIWCFGP+GTGPN+L+D +KGVQYLNEIKDSVVAGFQWA +EGV+++EN+RGVRFN
Sbjct: 638 TEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFN 697
Query: 542 IYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAHP 646
++DVTLH DAIHRGGGQIIPT RR YA +LTA P
Sbjct: 698 VHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEP 732
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 186 bits (453), Expect = 1e-47
Identities = 88/219 (40%), Positives = 136/219 (62%), Gaps = 4/219 (1%)
Frame = +2
Query: 2 LKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETV 181
L+++ KS P++ EESGEH++ G GE +++ + D+ + + I IK +DPVV++ ETV
Sbjct: 611 LRKVNKSYPLLTTRVEESGEHVLLGTGEFYMDCVMHDMRKVFSEIDIKVADPVVTFNETV 670
Query: 182 AEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDV 361
E S C +++PNK N++ M A+P+ L EDI+ V + + + KY +D+
Sbjct: 671 IETSTLKCFAETPNKKNKITMMAEPLEKQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDL 730
Query: 362 TEARKIWCFGPEGTGPNILVD----CSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRG 529
AR IW FGP+ TGPNIL+D L+ +++S+V GFQWA +EG + EE +R
Sbjct: 731 LAARSIWAFGPDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEPIRQ 790
Query: 530 VRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAHP 646
V+F + D + T+ ++RGGGQ+IPT RRC Y+ L A P
Sbjct: 791 VKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATP 829
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 182 bits (443), Expect = 2e-46
Identities = 87/219 (39%), Positives = 135/219 (61%), Gaps = 4/219 (1%)
Frame = +2
Query: 2 LKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETV 181
L+++ KS P++ EESGEH++ G GE +++ + D+ + + I IK +DPVV++ ETV
Sbjct: 486 LRKVNKSYPLLTTRVEESGEHVLLGTGEFYMDCVMHDMRKVFSEIDIKVADPVVTFNETV 545
Query: 182 AEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDV 361
E S C +++PNK N++ M A+P+ L EDI+ V + + + KY +D+
Sbjct: 546 IETSTLKCFAETPNKKNKITMMAEPLEKQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDL 605
Query: 362 TEARKIWCFGPEGTGPNILVD----CSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRG 529
AR IW FG + TGPNIL+D L+ +++S+V GFQWA +EG + EE +R
Sbjct: 606 LAARSIWAFGLDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEPIRQ 665
Query: 530 VRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAHP 646
V+F + D + T+ ++RGGGQ+IPT RRC Y+ L A P
Sbjct: 666 VKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATP 704
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 50.8 bits (116), Expect = 9e-07
Identities = 26/64 (40%), Positives = 40/64 (62%)
Frame = +2
Query: 2 LKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETV 181
LK LA D ++ + E+GE + AGE+HL+ C+KDL D + + S+P+V + ETV
Sbjct: 497 LKLLALLDTSLKVMELENGELAMVTAGEVHLQKCIKDL-NDLGLVDLDVSEPIVPFMETV 555
Query: 182 AEES 193
E+S
Sbjct: 556 IEDS 559
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 50.8 bits (116), Expect = 9e-07
Identities = 26/64 (40%), Positives = 40/64 (62%)
Frame = +2
Query: 2 LKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETV 181
LK LA D ++ + E+GE + AGE+HL+ C+KDL D + + S+P+V + ETV
Sbjct: 497 LKLLALLDTSLKVMELENGELAMVTAGEVHLQKCIKDL-NDLGLVDLDVSEPIVPFMETV 555
Query: 182 AEES 193
E+S
Sbjct: 556 IEDS 559
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 LKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRET 178
L R K DP + N+E+ E IV+G GELHLEI + ++ ++ C P++ P V+YRE
Sbjct: 467 LTRFTKEDPTFRREYNQEAKETIVSGMGELHLEIYAQRMKSEYNC-PVELGKPTVAYREC 525
Query: 179 VAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPED 280
+ K F + + + D LP D
Sbjct: 526 LGSPYKFHFRHKKQTGGQGQFGEIEGVIDPLPSD 559
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.3 bits (75), Expect = 0.082
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 2 LKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRET 178
L+ L + DP ++ + ++G+ IV GELHLE +KD + + + + V+YRE
Sbjct: 414 LEELTREDPSMKIRFDRDTGQTIVETQGELHLE-AIKDRLKRNYKLDVFIGKLQVAYREM 472
Query: 179 VAEE 190
+ EE
Sbjct: 473 LTEE 476
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +2
Query: 128 ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPR 307
AC+PI VS E ++ES+ K +K + +KA + DG+P D D+G +
Sbjct: 228 ACLPISVKCDGVSDCENESDESNCNKCQKGAHKCGKNCIKASKVCDGIP-DCDDGSDEHQ 286
Query: 308 DDFKT 322
D KT
Sbjct: 287 CDCKT 291
>Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical
protein W07G1.5b protein.
Length = 450
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +2
Query: 68 VAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMK 247
V GA E+ LE ++ + D A I + PVV+ R A+ ++S +
Sbjct: 293 VTGAAEI-LEFPEEEKKIDMATIHRTPTPPVVASRPATAKAPGTPA-NRSATALEAKSVS 350
Query: 248 AQPMPDGLPEDIDEGRVNPRDD 313
QP P+ E+ DEG + DD
Sbjct: 351 QQPTPESSEEEEDEGNGDEDDD 372
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 453 KLRTLLWLDSSGPLRKELWLKRICVVLDST 542
K++TL+W PL KEL L+R+ V D +
Sbjct: 256 KVQTLIWAIGRDPLTKELNLERVGVKTDKS 285
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 453 KLRTLLWLDSSGPLRKELWLKRICVVLDST 542
K++TL+W PL KEL L+R+ V D +
Sbjct: 270 KVQTLIWAIGRDPLTKELNLERVGVKTDKS 299
>Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical
protein D2030.2b protein.
Length = 470
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +3
Query: 312 TSRLALGILQKSTNTMLPKPVRFGALAPRVPAPTSWWIAPKEFSTSMKLRTLLWLDSSGP 491
+S L I+Q+ +N P P A +PR APT + KE S ++ +L + SG
Sbjct: 97 SSELRNSIMQQQSNNQPPSP----AQSPRNAAPTFRALPEKEQSVRLEKSNVLLVGPSG- 151
Query: 492 LRKELWLKRICVVLD 536
+ K + + VLD
Sbjct: 152 VGKTFLTQTLARVLD 166
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +3
Query: 312 TSRLALGILQKSTNTMLPKPVRFGALAPRVPAPTSWWIAPKEFSTSMKLRTLLWLDSSGP 491
+S L I+Q+ +N P P A +PR APT + KE S ++ +L + SG
Sbjct: 213 SSELRNSIMQQQSNNQPPSP----AQSPRNAAPTFRALPEKEQSVRLEKSNVLLVGPSG- 267
Query: 492 LRKELWLKRICVVLD 536
+ K + + VLD
Sbjct: 268 VGKTFLTQTLARVLD 282
>L07144-11|AAM54163.1| 144|Caenorhabditis elegans Hypothetical
protein R05D3.12 protein.
Length = 144
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +2
Query: 164 SYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTE 343
+Y VA DQ+ + +++ ++ K P GL + DE VN D+ +R
Sbjct: 62 TYIGGVAMREDQIIWLRD-SENRKMIAKEVTYPPGLLKIFDEILVNAADNKARDSRIYVL 120
Query: 344 KYEYDVTEARKIWCFG 391
+ YD T +R CFG
Sbjct: 121 RQSYD-TLSRHDNCFG 135
>AL132865-7|CAB60598.1| 234|Caenorhabditis elegans Hypothetical
protein Y62E10A.10 protein.
Length = 234
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 284 DEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKD 463
+ GR P+ F R +YL + +++A++ GP P+ + + KG +N I
Sbjct: 61 ENGRFLPKTSFNARRQYLCAEETGYLSKAQQRPAKGPNPMDPSQMTEMLKG-NMMNMIPM 119
Query: 464 SVVAGF 481
VV G+
Sbjct: 120 IVVGGW 125
>Z81097-17|CAF31479.2| 269|Caenorhabditis elegans Hypothetical
protein K07A1.16 protein.
Length = 269
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +3
Query: 432 KEFSTSMKLRTLLWLDSSGPLRKELWLKRICVVLDSTSMM*HSILMPSIEVVAKSFQQLE 611
K F S +L LL L+ G L+ + + + +LD+ ++ + + IE+ FQ+
Sbjct: 27 KSFDNSKRLSALLILEFIGTLQICVPMFDVGTILDNYGLLGVFVEITVIELANCYFQR-- 84
Query: 612 DACTHVC*LLT 644
DA H C L+T
Sbjct: 85 DAVAHPCPLVT 95
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +2
Query: 242 MKAQPMPDGLPEDIDEGRVNP---RDDFKTRARYLTEKYEYDVTEARKI 379
++ P P PE R NP RDD + ++ E+ VTE R I
Sbjct: 87 IQIHPAPIAGPESTSSFRTNPEENRDDEEDNVEETDQEIEFPVTEERSI 135
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 90 WSSPAPATMCSPDSSLIHCT 31
W SP+P T S DS L+H T
Sbjct: 495 WDSPSPDTPSSSDSRLVHPT 514
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 90 WSSPAPATMCSPDSSLIHCT 31
W SP+P T S DS L+H T
Sbjct: 495 WDSPSPDTPSSSDSRLVHPT 514
>Z69788-7|CAM33502.1| 132|Caenorhabditis elegans Hypothetical
protein F09A5.9 protein.
Length = 132
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +2
Query: 11 LAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEE 190
L SD ++ E GEH GE+ + L+ H C +++D ++ E A+
Sbjct: 52 LFDSDDVLDETTVEYGEHFTLDGGEIEIFSTEPYLQIVHKCFGTERTD-IIDLSEFEADS 110
Query: 191 SDQL 202
+D L
Sbjct: 111 NDIL 114
>U64836-6|AAG24056.2| 201|Caenorhabditis elegans Hypothetical
protein F10G2.1 protein.
Length = 201
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 203 CLSKSPNKHNRLFMKAQPMPDGLPEDIDE 289
C K NK++ + P PD + E+ DE
Sbjct: 116 CSEKLENKNSTCYQNWDPFPDAIDEETDE 144
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 137 PIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPD 265
P S+ V + R+T E+ Q ++K+P+ N ++ P+P+
Sbjct: 1626 PGPTSEHVATIRKTPVRETHQSSITKAPSLENVAKIRQSPVPE 1668
>U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms protein
1 protein.
Length = 442
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -2
Query: 85 FSSTSDNVFS*FFINTLHHGVRFSQT 8
F+ST+ NVF F +++L HG+ F T
Sbjct: 303 FNSTACNVFFTFAVSSLLHGLDFQMT 328
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -3
Query: 192 DSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLI 40
+ +T + Y+ G+DFL G+Q + +S A A + P+SS +
Sbjct: 379 EKKSTAAEYNPFGADFLSGIQNGKEAPPSASAELLASEAIARLPKPESSSV 429
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -3
Query: 192 DSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLI 40
+ +T + Y+ G+DFL G+Q + +S A A + P+SS +
Sbjct: 379 EKKSTAAEYNPFGADFLSGIQNGKEAPPSASAELLASEAIARLPKPESSSV 429
>AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein.
Length = 442
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -2
Query: 85 FSSTSDNVFS*FFINTLHHGVRFSQT 8
F+ST+ NVF F +++L HG+ F T
Sbjct: 303 FNSTACNVFFTFAVSSLLHGLDFQMT 328
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,026,452
Number of Sequences: 27780
Number of extensions: 388796
Number of successful extensions: 1227
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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