Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0833
         (629 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent ...   137   3e-34
AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.          137   3e-34
AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.          137   3e-34
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   8.0  

>DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent
           anion channel protein.
          Length = 282

 Score =  137 bits (331), Expect = 3e-34
 Identities = 54/104 (51%), Positives = 85/104 (81%)
 Frame = +2

Query: 215 SNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQ 394
           SNQ++GKVFGSL +K+ VK+YGL F+EKWNTDNTL +++++++++  GLKV+ +G F P 
Sbjct: 46  SNQDTGKVFGSLETKYKVKEYGLNFSEKWNTDNTLTSEVSVENQLVKGLKVSFDGMFVPH 105

Query: 395 TGTKTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWL 526
           TG+KTG+ KT++++D V V+ + ++DL+GP+V+ + V  YQGWL
Sbjct: 106 TGSKTGRFKTAYSHDRVRVDADFNVDLSGPLVNASGVAAYQGWL 149



 Score = 73.7 bits (173), Expect = 4e-15
 Identities = 33/44 (75%), Positives = 40/44 (90%), Gaps = 1/44 (2%)
 Frame = +1

Query: 79  MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEF-TSG 207
           MAPP Y+DLGK+A DVF+KGYHFG++KLD+KTK+ SGVEF TSG
Sbjct: 1   MAPPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTSG 44



 Score = 54.8 bits (126), Expect = 2e-09
 Identities = 23/35 (65%), Positives = 27/35 (77%)
 Frame = +3

Query: 525 LAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNV 629
           LAG    FD+QK+K + NNFALGY +GDF LHTNV
Sbjct: 149 LAGYQVAFDSQKSKITANNFALGYSAGDFVLHTNV 183


>AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score =  137 bits (331), Expect = 3e-34
 Identities = 54/104 (51%), Positives = 85/104 (81%)
 Frame = +2

Query: 215 SNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQ 394
           SNQ++GKVFGSL +K+ VK+YGL F+EKWNTDNTL +++++++++  GLKV+ +G F P 
Sbjct: 46  SNQDTGKVFGSLETKYKVKEYGLNFSEKWNTDNTLTSEVSVENQLVKGLKVSFDGMFVPH 105

Query: 395 TGTKTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWL 526
           TG+KTG+ KT++++D V V+ + ++DL+GP+V+ + V  YQGWL
Sbjct: 106 TGSKTGRFKTAYSHDRVRVDADFNVDLSGPLVNASGVAAYQGWL 149



 Score = 73.7 bits (173), Expect = 4e-15
 Identities = 33/44 (75%), Positives = 40/44 (90%), Gaps = 1/44 (2%)
 Frame = +1

Query: 79  MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEF-TSG 207
           MAPP Y+DLGK+A DVF+KGYHFG++KLD+KTK+ SGVEF TSG
Sbjct: 1   MAPPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTSG 44



 Score = 54.8 bits (126), Expect = 2e-09
 Identities = 23/35 (65%), Positives = 27/35 (77%)
 Frame = +3

Query: 525 LAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNV 629
           LAG    FD+QK+K + NNFALGY +GDF LHTNV
Sbjct: 149 LAGYQVAFDSQKSKITANNFALGYSAGDFVLHTNV 183


>AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score =  137 bits (331), Expect = 3e-34
 Identities = 54/104 (51%), Positives = 85/104 (81%)
 Frame = +2

Query: 215 SNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQ 394
           SNQ++GKVFGSL +K+ VK+YGL F+EKWNTDNTL +++++++++  GLKV+ +G F P 
Sbjct: 46  SNQDTGKVFGSLETKYKVKEYGLNFSEKWNTDNTLTSEVSVENQLVKGLKVSFDGMFVPH 105

Query: 395 TGTKTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWL 526
           TG+KTG+ KT++++D V V+ + ++DL+GP+V+ + V  YQGWL
Sbjct: 106 TGSKTGRFKTAYSHDRVRVDADFNVDLSGPLVNASGVAAYQGWL 149



 Score = 73.7 bits (173), Expect = 4e-15
 Identities = 33/44 (75%), Positives = 40/44 (90%), Gaps = 1/44 (2%)
 Frame = +1

Query: 79  MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEF-TSG 207
           MAPP Y+DLGK+A DVF+KGYHFG++KLD+KTK+ SGVEF TSG
Sbjct: 1   MAPPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTSG 44



 Score = 54.8 bits (126), Expect = 2e-09
 Identities = 23/35 (65%), Positives = 27/35 (77%)
 Frame = +3

Query: 525 LAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNV 629
           LAG    FD+QK+K + NNFALGY +GDF LHTNV
Sbjct: 149 LAGYQVAFDSQKSKITANNFALGYSAGDFVLHTNV 183


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 154 FKLDLKTKSESGVEFTSGIT 213
           F+LDL+ + ESG + +S IT
Sbjct: 157 FQLDLQLQDESGGDISSFIT 176


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,051
Number of Sequences: 2352
Number of extensions: 13692
Number of successful extensions: 36
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)