Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0826
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    29   0.028
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    25   0.61 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    24   1.4  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   4.3  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.9  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 29.5 bits (63), Expect = 0.028
 Identities = 20/59 (33%), Positives = 27/59 (45%)
 Frame = +2

Query: 338 SDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSNTVDSLC 514
           SD I  E  P+P E + T  +     Q +  P    S T+   QTT TP + N  D +C
Sbjct: 388 SDEIPPEPVPTP-EPQPTQTTESEPTQASEQPT--ESSTTQKPQTTKTPESGNESDGVC 443


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 509 SCRRYWTCLVSPWFGTTS 456
           SC RYWTC    W GT +
Sbjct: 111 SCTRYWTC----WNGTAT 124



 Score = 21.8 bits (44), Expect = 5.7
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -3

Query: 509 SCRRYWTC 486
           SC RYW C
Sbjct: 169 SCNRYWQC 176


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 391 FKFPAISTARCYATRAFSLWN 453
           F FPA+  + CYA    ++W+
Sbjct: 215 FVFPALIISACYAVIVRTIWS 235


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 550 YSAAIDFRSTRQA*AVDGIGRVWCRRGLE 464
           Y +A+D  + ++   VD   R W +RG +
Sbjct: 224 YPSAVDTTTNQKLLTVDAAIRGWIQRGAD 252


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 391 FKFPAISTARCYATRAFSLWN 453
           F  PA   A CYA    ++W+
Sbjct: 194 FIIPASIIATCYAIIIITIWS 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,765
Number of Sequences: 336
Number of extensions: 2575
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)