Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0826
(715 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_43399| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07) 32 0.53
SB_207| Best HMM Match : RVT_1 (HMM E-Value=7.4e-06) 32 0.53
SB_23464| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_35466| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_34601| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5) 31 1.2
SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05) 31 1.2
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_24349| Best HMM Match : Exo_endo_phos (HMM E-Value=0.001) 31 1.2
SB_9753| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_58716| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_37094| Best HMM Match : PH (HMM E-Value=0.0005) 30 2.1
SB_17878| Best HMM Match : Drf_FH1 (HMM E-Value=0.022) 30 2.1
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24) 29 3.7
SB_9823| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_33130| Best HMM Match : GSHPx (HMM E-Value=1.3e-15) 29 4.9
SB_21771| Best HMM Match : TP2 (HMM E-Value=0.34) 29 4.9
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 29 4.9
SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11) 29 4.9
SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_1164| Best HMM Match : Pkinase (HMM E-Value=0.3) 28 6.5
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46) 28 6.5
SB_17431| Best HMM Match : RVT_1 (HMM E-Value=1.8e-25) 28 6.5
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 28 6.5
SB_57436| Best HMM Match : SCP (HMM E-Value=3.9e-13) 28 8.6
SB_25017| Best HMM Match : VirB (HMM E-Value=1.3) 28 8.6
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 28 8.6
SB_58553| Best HMM Match : rve (HMM E-Value=0.0011) 28 8.6
SB_32671| Best HMM Match : SerH (HMM E-Value=0.4) 28 8.6
SB_23606| Best HMM Match : VirB (HMM E-Value=1.3) 28 8.6
SB_12548| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 8.6
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 350 SSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSNTVDSLCLPGT 526
S+ + P + ST ++P + + +TL T + T +TP+T +T +L +P T
Sbjct: 160 STPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPST 218
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 350 SSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSNTVDSLCLPGT 526
S+ + P + ST ++P + + +TL T + T +TP+T +T +L +P T
Sbjct: 710 STPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPST 768
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +2
Query: 323 PGTDVS-DRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSNT 499
PGT ++ +S+ PS + ST ++P + +TL T +TP+T +T
Sbjct: 177 PGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPST 236
Query: 500 VDSLCLPGTSEVDS 541
+ + P T S
Sbjct: 237 LSTPITPSTPSTPS 250
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +2
Query: 323 PGTDVS-DRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSNT 499
PGT ++ +S+ PS + ST ++P + +TL T +TP+T +T
Sbjct: 727 PGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPST 786
Query: 500 VDSLCLPGTSEVDS 541
+ + P T S
Sbjct: 787 LSTPITPSTPSTPS 800
Score = 28.3 bits (60), Expect = 6.5
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Frame = +2
Query: 296 TSAKRPRPD-PGT-DVSDRISSEVNPSPCESESTSNSP--PSLLQDATLPAL----LVSG 451
T + R P P T +S PS + ST ++P PS L P+
Sbjct: 194 TPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPITPSTPSTPSTPS 253
Query: 452 TSTLFQTTATPNTSNTVDSLCLPGTSEVDS 541
T ++ T +TP+T +T + C P T S
Sbjct: 254 TPSMPSTPSTPSTPSTPSTPCTPNTPSTPS 283
Score = 28.3 bits (60), Expect = 6.5
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Frame = +2
Query: 296 TSAKRPRPD-PGT-DVSDRISSEVNPSPCESESTSNSP--PSLLQDATLPAL----LVSG 451
T + R P P T +S PS + ST ++P PS L P+
Sbjct: 744 TPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPITPSTPSTPSTPS 803
Query: 452 TSTLFQTTATPNTSNTVDSLCLPGTSEVDS 541
T ++ T +TP+T +T + C P T S
Sbjct: 804 TPSMPSTPSTPSTPSTPSTPCTPNTPSTPS 833
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 32.7 bits (71), Expect = 0.30
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +2
Query: 323 PGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSNTV 502
PG+ VS + S P S +N+P SLL + T GT+ ++T P T+ +
Sbjct: 464 PGSTVSPK--STAAPGTTVSREGTNTPDSLLAEGTT----APGTTLGNESTVVPGTTISP 517
Query: 503 DSLCLPGTS 529
+S PGT+
Sbjct: 518 ESTVAPGTT 526
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 311 PRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLQD---ATLPALLVSGTSTLFQTTAT 481
P P G++ + + V + ++ T+ SP S + A + + GT+ L ++TA
Sbjct: 845 PGPTIGSESTVTRGATVASASTDAPGTTVSPESTVAPGIAAASESSITPGTTVLPESTAA 904
Query: 482 PNTSNTVDSLCLPGTS 529
P T+ +S PGT+
Sbjct: 905 PLTTGASESTVAPGTT 920
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +2
Query: 383 ESTSNSPPSLLQDATLPALLVSG--TSTLFQTTATPNTSNTVDSLCLPGTS 529
E+TS + +Q+AT S T+ L +TTA P T++ ++ +PGT+
Sbjct: 2365 ETTSAPKTTAVQEATASPETTSEPETTALPKTTAAPETTSPTETTAVPGTT 2415
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Frame = +2
Query: 296 TSAKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATL-PALLVS-------G 451
T A PGT V+ R S+ + S ST ++ ++T+ P + V+ G
Sbjct: 1398 TLASESTAAPGTTVA-RESTVTRAATVASASTDAQGTTVSPESTVAPGIAVASESSITPG 1456
Query: 452 TSTLFQTTATPNTSNTVDSLCLPGTS 529
T+ L ++TA P T+ +S PGT+
Sbjct: 1457 TTVLPESTAAPLTTGASESTVAPGTT 1482
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +2
Query: 296 TSAKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTT 475
TSA PGT V S+ S EST+ ++L ++T+ GT+ L ++T
Sbjct: 192 TSASANTAPPGTTVLPE-STAAPGSTVLPESTAAPGSTVLPESTV----APGTTVLPEST 246
Query: 476 ATPNTSNTVDSLCLPGTS 529
+P T+ +S GT+
Sbjct: 247 VSPGTTVATESTVTRGTT 264
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Frame = +2
Query: 296 TSAKRPRPDPGTDVSDRIS----SEVNPSPCESESTSNSPPSLLQDATLPAL---LVSGT 454
T A PGT V+ + + V + +++ T+ SP S + A + GT
Sbjct: 603 TLAPESTAAPGTTVASESTVTRGATVASASTDAQGTTVSPESTVALGIAVASESSITPGT 662
Query: 455 STLFQTTATPNTSNTVDSLCLPGTS 529
+ L ++TA P T+ +S PGT+
Sbjct: 663 TVLPESTAAPLTTGASESTVAPGTT 687
Score = 27.9 bits (59), Expect = 8.6
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 296 TSAKRPRPDPGTDVSDRISSEVNP-SPCESESTSNSPPSLLQDATLPALLVSGTSTLFQT 472
T+A PGT +S S V P + SE T ++ D+T SGT+ ++
Sbjct: 407 TAASESTVAPGTTLSPE--STVAPGTTVASEITVTRGTTVASDSTFS----SGTTLRSKS 460
Query: 473 TATPNTSNTVDSLCLPGTS 529
T TP ++ + S PGT+
Sbjct: 461 TITPGSTVSPKSTAAPGTT 479
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +2
Query: 296 TSAKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLL--QDATLPALL-VSGTSTLF 466
TSA P T S +++ P + T+ P ++ + T+P V GT+ +
Sbjct: 1935 TSAPETTALPETTASPETTAK--PDTTGAPETTFVPETIAAPETTTVPGTTAVPGTTAVS 1992
Query: 467 QTTATPNTSNTVDSLCLPGTS 529
+T ATP T+ ++ +P T+
Sbjct: 1993 ETVATPETTAAPETTAVPETT 2013
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 452 TSTLFQTTATPNTSNTVDSLCLPGTSEV 535
T+TL +TTA P T++ + PGT+ V
Sbjct: 2859 TTTLPKTTAAPETTSVPKTTAAPGTTSV 2886
>SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1207
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 362 NPSPCESESTSNSPPSLLQDATLPALLVSG--TSTLFQTTATPNTSNTVDSLCLPGTSE 532
N + C S+ST+ +PP A +L SG ++T+ TATP +S T+ +PG ++
Sbjct: 835 NATKCSSDSTTTAPP----PAPTSSLATSGNTSTTISDNTATPTSSRTMQ---IPGQTQ 886
>SB_43399| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 31.9 bits (69), Expect = 0.53
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +2
Query: 314 RPDPGTDVSDRISSEVNPSPCESESTSNS---PPSLLQDATLPALLVSGTSTL 463
RP P + R SS NP+ C ST+NS PS L +A +PALL+S +L
Sbjct: 399 RPRPMDREARRPSSAHNPNNCVQVSTTNSIQKTPSSL-NAFVPALLLSNVMSL 450
>SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07)
Length = 585
Score = 31.9 bits (69), Expect = 0.53
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = +2
Query: 323 PGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLP--------ALLVSGTSTLFQTTA 478
PGT S S P S +N+P SLL + T + +VSGT+ ++T
Sbjct: 293 PGTTESPE--STAAPGTTVSREGTNTPDSLLPEGTTAPGTTFANESTVVSGTTISPESTV 350
Query: 479 TPNTSNTVDSLCLPGTSE 532
P ++ +S PGT+E
Sbjct: 351 APESTIASESSAAPGTTE 368
Score = 27.9 bits (59), Expect = 8.6
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 296 TSAKRPRPDPGTDVSDRISSEVNP-SPCESESTSNSPPSLLQDATLPALLVSGTSTLFQT 472
T+A PGT +S S V P + SE T ++ D+T SGT+ ++
Sbjct: 379 TAASESTVAPGTTLSPE--STVAPGTTVASEITVTRGTTVASDSTFS----SGTTLRSKS 432
Query: 473 TATPNTSNTVDSLCLPGTS 529
T TP ++ + S PGT+
Sbjct: 433 TITPGSTVSPKSTAAPGTT 451
>SB_207| Best HMM Match : RVT_1 (HMM E-Value=7.4e-06)
Length = 773
Score = 31.9 bits (69), Expect = 0.53
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +2
Query: 314 RPDPGTDVSDRISSEVNPSPCESESTSNS---PPSLLQDATLPALLVSGTSTL 463
RP P + R SS NP+ C ST+NS PS L +A +PALL+S +L
Sbjct: 110 RPRPMDREARRPSSAHNPNNCVQVSTTNSIQKTPSSL-NAFVPALLLSNVMSL 161
>SB_23464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 31.1 bits (67), Expect = 0.93
Identities = 35/125 (28%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
Frame = -2
Query: 687 LFTPPVLSSFINQATAEDEEVAH-RPPDDVKGSARPPKVVVVAHPLTIPQLSTSEVPGKH 511
LF+ PVL+ F + DEE VKG + P V V S + KH
Sbjct: 300 LFSSPVLAGFTKLTESVDEESGFISLCVAVKGKSDIPLSVYVTTENEGTSSSDLQKLDKH 359
Query: 510 KLSTVLD----VFGVAVVWNNVDVPETKSAGSVASCSRDGGEFEVDSDSQGLGLTSLDIR 343
++ + D F V ++ + DVPE SV S D VDS + +T DI+
Sbjct: 360 QVMLLADRNVTCFNVTIL--DDDVPEGDEHFSVTLSSND-SRVTVDSGYSSIRVTIRDIK 416
Query: 342 SETSV 328
+ ++
Sbjct: 417 DKVTI 421
>SB_35466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 829
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = -2
Query: 540 LSTSEVPGK----HKLSTVLDVFGVAVVWNNVDVPETKSAGSVASCSRDGGEFEVD 385
L+TS +PGK +TV DV +++W + +T S +C DG F ++
Sbjct: 243 LATSHLPGKVFCLESEATVTDVLQDSLLWIKKTLQKTTLGHSNQTCMHDGSSFRLE 298
>SB_34601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1391
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 317 PDPGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSN 496
P PG ++ + S++ P + STS PP+ +LP V S L + N+SN
Sbjct: 638 PPPGQPIN--VQSQIYGFPGPTGSTSQQPPAYTSSQSLPGQCVEPQSRLQKYKEPGNSSN 695
>SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5)
Length = 737
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +2
Query: 323 PGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVS-GTSTL-FQTT--ATPNT 490
PG + + ++ ++PS + +T +S SL + + L+ S TS L + TT ATPNT
Sbjct: 225 PGPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLIPSISTSILPYNTTVIATPNT 284
Query: 491 SNTVDSLCLPGTSEVDS 541
+ V S T V +
Sbjct: 285 TRLVTSTISSSTVNVSA 301
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +2
Query: 323 PGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVS-GTSTL-FQTT--ATPNT 490
P + + ++ ++PS + +T +S SL + + L+ S TS L + TT ATPNT
Sbjct: 426 PAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLIPSISTSILPYNTTVIATPNT 485
Query: 491 SNTVDSLCLPGTSEVDS 541
+ V S T V +
Sbjct: 486 TRLVTSTISSSTVNVSA 502
>SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +2
Query: 347 ISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSNTVDSLCLPGT 526
ISS V P+ ++S S+ +T + + T TT+TP + + SL LP T
Sbjct: 568 ISSLVLPTTTSVLTSSMESSSMATTSTTSTPSLESSMTTNSTTSTPAEAVAISSLVLPST 627
Query: 527 SEV 535
+ V
Sbjct: 628 TSV 630
>SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05)
Length = 1960
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +2
Query: 323 PGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVS-GTSTL-FQTT--ATPNT 490
PG + + ++ ++PS + +T +S SL + + L+ S TS L + TT ATPNT
Sbjct: 1320 PGPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLIPSISTSILPYNTTVIATPNT 1379
Query: 491 SNTVDSLCLPGTSEVDS 541
+ V S T V +
Sbjct: 1380 TRLVTSTISSSTVNVSA 1396
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +2
Query: 323 PGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVS-GTSTL-FQTT--ATPNT 490
PG + + ++ ++P+ + +T +S SL + L+ S TS L + TT ATPNT
Sbjct: 918 PGPNATSTAATTMSPTYVANMTTLDSSVSLTRSLLSTTLIPSISTSILPYNTTVIATPNT 977
Query: 491 SNTVDSLCLPGTSEVDS 541
+ V S+ T V +
Sbjct: 978 TRLVTSMISSSTVNVSA 994
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +2
Query: 323 PGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVS-GTSTL-FQTT--ATPNT 490
P + + ++ ++PS + +T +S SL + + L+ S TS L + TT ATPNT
Sbjct: 114 PAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLIPSISTSILPYNTTVIATPNT 173
Query: 491 SNTVDSLCLPGTSEVDS 541
+ V S T V +
Sbjct: 174 TRLVTSTISSSTVNVSA 190
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +2
Query: 323 PGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVS-GTSTL-FQTT--ATPNT 490
P + + ++ ++PS + +T +S SL + + L+ S TS L + TT ATPNT
Sbjct: 315 PAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLIPSISTSILPYNTTVIATPNT 374
Query: 491 SNTVDSLCLPGTSEVDS 541
+ V S T V +
Sbjct: 375 TRLVTSTISSSTVNVSA 391
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +2
Query: 296 TSAKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLQDAT-LP-ALLVSGTSTLFQ 469
T A++ PGT ++ E +P EST P ++ ++T +P + +V GT+ +
Sbjct: 2342 TLAQKTTAGPGTT----LAQETTMAP---ESTVVPPTTIAPESTEIPNSTVVPGTTISPK 2394
Query: 470 TTATPNTSNTVDSLCLPGTS 529
+T P T+ T +S PGT+
Sbjct: 2395 STEVPPTTMTAESTVAPGTT 2414
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +2
Query: 296 TSAKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTT 475
T+A PGT V+ + S V P + T++ P + + T V T+ +TT
Sbjct: 3518 TAAPETTVAPGTTVA--LESTVAPETSIAPETTDEPETTVDPETTA---VPETTVSQETT 3572
Query: 476 ATPNTSNTVDSLCLPGTSEV 535
P T+ +S PGT+ V
Sbjct: 3573 MAPETTALPESTVAPGTTVV 3592
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +2
Query: 323 PGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPA---LLVSGTSTLFQTTATPNTS 493
PGT V+ + S V P + T+++P + + T A + T+ ++TT P+++
Sbjct: 2949 PGTTVAPK--STVGPETSVAPETTDAPETTVVPETTVAPETTMAPETTVAYETTVAPDST 3006
Query: 494 NTVDSLCLPGTS 529
++ PGT+
Sbjct: 3007 AAPETTVAPGTT 3018
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 359 VNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSNTVDSLCLPGTSE 532
V P E+ T+ +P + AT LV T+ +TTA P T+ D+ P T++
Sbjct: 1095 VAPETTEAPQTTAAPETTAGPATT---LVPETTLAPETTAAPETTMVPDTTVAPDTTD 1149
>SB_24349| Best HMM Match : Exo_endo_phos (HMM E-Value=0.001)
Length = 534
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 314 RPDPGTDVSDRISSEVNPSPCESESTSNS--PPSLLQDATLPALLVSGTSTL 463
RP P + R SS NP+ C ST+NS + +A +PALL+S +L
Sbjct: 45 RPRPMDREAKRPSSAHNPNNCVQVSTTNSIQKTPISLNAFVPALLLSNVRSL 96
>SB_9753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 314 RPDPGTDVSDRISSEVNPSPCESESTSNS--PPSLLQDATLPALLVSGTSTL 463
RP P + R SS NP+ C ST+NS + +A +PALL+S +L
Sbjct: 45 RPRPMDREAKRPSSAHNPNNCVQVSTTNSIQKTPISLNAFVPALLLSNVRSL 96
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +2
Query: 383 ESTSNSPPSLLQDATLPALLVSG--TSTLFQTTATPNTSNTVDSLCLPGTS 529
E+TS + +Q+AT S T+ L +TTA P T++ ++ +PGT+
Sbjct: 2908 ETTSAPKTTAVQEATASPETTSEPETTALPKTTAAPETTSPTETTAVPGTT 2958
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 296 TSAKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLQD--ATLPALLVSGTSTLFQ 469
TS PGT + + ++ + + ++T + + + + AT V GT+ +
Sbjct: 2946 TSPTETTAVPGTTAAPKTTASPETT-AKPDTTGAAETTFVPETIATPETTTVPGTTAAPE 3004
Query: 470 TTATPNTSNTVDSLCLPGTSEV 535
TTA P +++ ++ LP T+ V
Sbjct: 3005 TTAVPESTSVPETTALPKTTAV 3026
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +2
Query: 296 TSAKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLL--QDATLPALL-VSGTSTLF 466
TSA P T S +++ P + T+ P ++ + T+P V GT+ +
Sbjct: 3090 TSAPETTALPETTASPETTAK--PDTTGAPETTFVPETIAAPETTTVPGTTAVPGTTAVS 3147
Query: 467 QTTATPNTSNTVDSLCLPGTS 529
+T ATP T+ ++ +P T+
Sbjct: 3148 ETVATPETTAAPETTAVPETT 3168
>SB_58716| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 314 RPDPGTDVSDRISSEVNPSPCESESTSNS--PPSLLQDATLPALLVSGTSTL 463
RP P + R SS NP+ C ST+NS + +A +PALL+S +L
Sbjct: 45 RPRPMDREARRPSSAHNPNNCVQVSTTNSIQKTPISLNAFVPALLLSNVMSL 96
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +2
Query: 302 AKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTAT 481
+ P DP + S SSE +P+P + S S SP S ++ P+ S + + +
Sbjct: 504 SSNPSSDPSPNPSSNPSSEPSPNPISNPSISTSPISNPHPSSNPSPHPSSNPS---SEPS 560
Query: 482 PNTSNTVDSLCLPGTS 529
PN S+ S P S
Sbjct: 561 PNPSSNPSSDPSPNPS 576
>SB_37094| Best HMM Match : PH (HMM E-Value=0.0005)
Length = 1007
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 431 PALLVSGTSTLFQTTATPNTSNTVDSLCLPGTSEVDSCGI 550
P+L VS ++ T+ TP+ + T D+ PG++E+ + G+
Sbjct: 156 PSLSVSSEKSVLSTSTTPSDTVTQDANNSPGSTELGTYGL 195
>SB_17878| Best HMM Match : Drf_FH1 (HMM E-Value=0.022)
Length = 664
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/58 (37%), Positives = 26/58 (44%)
Frame = +2
Query: 281 LYIYETSAKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGT 454
LY + AK P P G D I + PSP S ST+ PS P +VSGT
Sbjct: 135 LYGASSPAKNPGPTTGRFSKDAIGGDSTPSP--SLSTAPCEPSTSSSCGTP--VVSGT 188
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Frame = +2
Query: 287 IYETSAKRPRPDPG---TDVSDRISSEVNPSPCESESTSNSPPSLLQDAT-LPAL----L 442
+ + S K PRP PG D R +S V+ + SN PS T LPAL L
Sbjct: 1127 VRKASLKTPRPSPGKLRDDGITRPASRVSAQQISRKPRSNDQPSQATSKTKLPALRSKPL 1186
Query: 443 VSGTSTLFQTTATPNTSNTVDS 508
+ Q TP T ++ S
Sbjct: 1187 SGSPPKIQQARLTPRTPSSAFS 1208
>SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24)
Length = 889
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = +2
Query: 320 DPGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSNT 499
+P +S + +PS + ST+N PS A + TS + T+ P T++
Sbjct: 547 NPSGQLSSLFGNTSHPSTTLTASTNNPQPSTQSGALFGSAAQPSTSAVSSPTSQPQTTSQ 606
Query: 500 VDSLCLPGTS 529
S L G S
Sbjct: 607 PSSGGLFGAS 616
>SB_9823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1329
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -2
Query: 684 FTPPVLSSFINQATAEDEEVAHRPPDDVKGSARPPKVVV-VAHPLTIPQLSTSEVPGKHK 508
F PP ++ +++ + + PP DV A K VAH +I +L +E PG +
Sbjct: 695 FPPPPADLTTSRLSSQSSDPGYTPPPDVTRKASDTKPPTRVAHVSSI-RLENNESPGTSR 753
Query: 507 LST 499
+S+
Sbjct: 754 VSS 756
>SB_33130| Best HMM Match : GSHPx (HMM E-Value=1.3e-15)
Length = 194
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = -2
Query: 636 DEEVAHRPPDDVKGSARPPKVVVVA--HPLTIPQLSTSEVP-GKHKLSTVLDVFG 481
DEE P D RP V+VV HP PQL+ V GK + L VFG
Sbjct: 3 DEEFLKVPADVAALDRRPDDVIVVTHDHPAQYPQLNALAVNYGKVEDVCSLKVFG 57
>SB_21771| Best HMM Match : TP2 (HMM E-Value=0.34)
Length = 1691
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 341 DRISSEVN-PSPCESESTSNSPPSLLQDATLP 433
+ +S EV+ PSP S+++S + PS+L + LP
Sbjct: 644 NHVSKEVSVPSPLSSDASSPASPSILGETELP 675
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +2
Query: 314 RP-DPGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNT 490
RP + G+D R S V+ +PC S +P + L + ++ T P+
Sbjct: 664 RPSESGSDTLCRPSKSVSDTPCRPSEVSVTPCVDPVTPCVSDTLCRPSESVSDTLCRPSK 723
Query: 491 SNTVDSLCLPGTSEVDS 541
S + D+LC P S D+
Sbjct: 724 SGS-DTLCRPSESVSDT 739
>SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11)
Length = 1552
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 311 PRPDPGTDVSDRISSEVNPSPCE-SESTSNSPPSLLQDATLPALL 442
P P D+S+ + EV P +E+ + PP LL+D+ P L
Sbjct: 1243 PPPPEEDDISEELVDEVQEFPVSPAETLPSPPPELLRDSPDPESL 1287
>SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1229
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +2
Query: 323 PGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVS-GTSTL-FQTT--ATPNT 490
P + + ++ ++PS + +T +S SL + + L+ S TS L + TT ATPNT
Sbjct: 114 PAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLIPSISTSILPYNTTVIATPNT 173
Query: 491 SNTVDSLCLPGTSEVDS 541
+ V S T V +
Sbjct: 174 TRLVTSTISSSTVNVSA 190
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +2
Query: 323 PGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVS-GTSTL-FQTT--ATPNT 490
P + + ++ ++PS + +T +S SL + + L+ S TS L + TT ATPNT
Sbjct: 315 PAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLIPSISTSILPYNTTVIATPNT 374
Query: 491 SNTVDSLCLPGTSEVDS 541
+ V S T V +
Sbjct: 375 TRLVTSTISSSTVNVSA 391
>SB_1164| Best HMM Match : Pkinase (HMM E-Value=0.3)
Length = 620
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 380 SESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSNTVDSLCLPGTSEVD 538
S++ S S P + + P V+ TS++ Q P + T+ +LCL GT+E D
Sbjct: 528 SQAISLSSPKIKKCVEEP---VNSTSSI-QENKHPPATRTIGALCLRGTAESD 576
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 296 TSAKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTS-TLFQT 472
T + +P+ PG V+ ++ V + SE+T+ + + LP + V+ S T +T
Sbjct: 401 TISTQPKKAPGITVAPE-TTVVPETTVASETTAETHQTTYPRDPLPEMFVTTQSNTATET 459
Query: 473 TATPNTSNTVDSLCLPGTS 529
T P T+ ++ P T+
Sbjct: 460 TEAPETTAEPETTAAPETT 478
>SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1994
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 350 SSEVNPSPCESESTSNSPPSLLQDATLP-ALLVSGTSTLFQTTATPNTSNTV 502
S + PSP + S+S + S L +LP A + TST+ TP++S V
Sbjct: 1076 SEVLEPSPSLTLSSSEAASSTLPPTSLPVAQSSTSTSTVKTAAVTPSSSTQV 1127
>SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46)
Length = 572
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +2
Query: 323 PGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVS-GTSTL-FQTT--ATPNT 490
P + + ++ ++PS + +T +S SL + + L+ S TS L + TT ATPNT
Sbjct: 298 PAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLIPSISTSILPYNTTVIATPNT 357
Query: 491 SNTVDSLCLPGTSEVDS 541
+ V S T V +
Sbjct: 358 TRLVTSTISSSTVNVSA 374
Score = 27.9 bits (59), Expect = 8.6
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +2
Query: 323 PGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVS-GTSTL-FQTT--ATPNT 490
P + + ++ ++PS + +T +S SL + + L+ S TS L + TT ATPNT
Sbjct: 97 PAPNATSTAATTMSPSYVANMTTLDSSVSLTRSSLSTTLIPSISTSILPYNTTVIATPNT 156
Query: 491 SNTVDSLCLPGTSEVDS 541
+ V S T V +
Sbjct: 157 TRMVTSSISSSTVNVSA 173
>SB_17431| Best HMM Match : RVT_1 (HMM E-Value=1.8e-25)
Length = 867
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +2
Query: 329 TDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTL---FQTTATPNTSNT 499
T V + ++ SE+T++ S+ A +P+LLVS T +L + N+
Sbjct: 91 TSVGNPVAQSTGIPSNASETTNSDISSINHPAVVPSLLVSNTRSLAPKISELQCVASQNS 150
Query: 500 VDSLCLPGTSEVDS 541
D +C+ T D+
Sbjct: 151 ADVVCITETWLTDN 164
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 359 VNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSNTVDSLCLPGTSE 532
V P E+ T+ +P + AT LV T+ +TTA P T+ D+ P T++
Sbjct: 2610 VAPETTEAPQTTAAPETTAGPATT---LVPETTLAPETTAAPETTMVPDTTVAPDTTD 2664
>SB_57436| Best HMM Match : SCP (HMM E-Value=3.9e-13)
Length = 265
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 308 RPRPDPGTDVSDRISSEVNPSPCESESTSNSPP--SLLQDATLPALL-VSGTSTLFQTTA 478
RP +P + SP E+ ++ P SL + LP + T++L +TT+
Sbjct: 3 RPGIEPALADGCSYHRSFSSSPDETSRNTSLPKTTSLPETTGLPETTSLPETTSLPETTS 62
Query: 479 TPNTSNTVDSLCLPGTSEV 535
P T+N ++ LP T+ +
Sbjct: 63 LPETTNLPETTSLPETTNL 81
>SB_25017| Best HMM Match : VirB (HMM E-Value=1.3)
Length = 136
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 672 VLSSFINQATAEDEEVAHRPPDDVKGSARPPKVV 571
+L+ I+ A E A PPD V+G PP VV
Sbjct: 7 ILAVIISVTIAAPTEYARGPPDVVQGLRGPPDVV 40
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +2
Query: 326 GTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNT 490
GT R + +P +++T+ +P S T + GTST+ TP+T
Sbjct: 695 GTTAVPRSTDGTTAAPMSTDATTAAPVST-DGTTAAPMSTDGTSTISSVETTPST 748
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/63 (23%), Positives = 31/63 (49%)
Frame = +2
Query: 335 VSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSNTVDSLC 514
++D ++SEV+ P +++N+PP L + P+L + + P + D+
Sbjct: 1090 IADSLASEVSGPPFTLFNSANNPPDLNKQNDSPSLTDGVYNPTTISIGVPPQQSFQDAST 1149
Query: 515 LPG 523
+PG
Sbjct: 1150 VPG 1152
>SB_58553| Best HMM Match : rve (HMM E-Value=0.0011)
Length = 1745
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = +1
Query: 466 PNHGDTKHVQYRRQLMLA----WYFGSR*LRNSQRMRNNYNFRRSRAAF----DVIGRSV 621
P+ GD + V + LM + W+ SR R+S + ++ + RSRA++ DV+G S+
Sbjct: 359 PDSGDGEAVLLKMALMRSHSGFWFSSSRFSRSSSSISDSLSSLRSRASWRRLTDVLGSSM 418
Query: 622 CHLLV 636
L V
Sbjct: 419 VSLSV 423
>SB_32671| Best HMM Match : SerH (HMM E-Value=0.4)
Length = 406
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +2
Query: 365 PSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSNTVDSLCLPGTSEVDS 541
PS +++SN+P +L +T + + T +L ++ TP + + LP TS +++
Sbjct: 149 PSTSNLKASSNTPTAL---STTSLMSLPSTPSLEASSNTPTALSATSLMSLPSTSSLEA 204
>SB_23606| Best HMM Match : VirB (HMM E-Value=1.3)
Length = 205
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 672 VLSSFINQATAEDEEVAHRPPDDVKGSARPPKVV 571
+L+ I+ A E A PPD V+G PP VV
Sbjct: 7 ILAVIISVTIAAPTEYARGPPDVVQGLRGPPDVV 40
>SB_12548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 302 AKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLQD 421
A P P G SD I ++V+ S + +STS+ P ++ D
Sbjct: 332 AGSPAPSAGLPASDVIYAQVDKSKKKRKSTSSEPGHVVYD 371
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 383 ESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSNTVDSLCLPGTSE 532
E+T S ++ +AT+ + T+ L +TT P T+ ++ PGT++
Sbjct: 766 ETTMASETTMAPEATVTTIAPETTAAL-ETTMAPETTAAPETTVAPGTTD 814
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,759,055
Number of Sequences: 59808
Number of extensions: 349124
Number of successful extensions: 1704
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1626
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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