Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0826
(715 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 35 0.050
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 35 0.050
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 35 0.050
U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical pr... 32 0.47
U23139-8|AAK31491.2| 1051|Caenorhabditis elegans Biotin protein ... 31 0.62
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 0.82
Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 30 1.9
U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical pr... 30 1.9
AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical ... 30 1.9
Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z48543-1|CAA88432.1| 645|Caenorhabditis elegans Hypothetical pr... 29 3.3
U58755-12|ABJ99069.1| 205|Caenorhabditis elegans Hypothetical p... 29 3.3
U58755-11|AAB00701.1| 247|Caenorhabditis elegans Hypothetical p... 29 3.3
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 29 3.3
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 29 4.4
U80439-9|AAO38675.1| 661|Caenorhabditis elegans Hypothetical pr... 28 7.6
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 7.6
U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical pr... 28 7.6
U41272-2|AAA82447.1| 143|Caenorhabditis elegans Hypothetical pr... 28 7.6
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 35.1 bits (77), Expect = 0.050
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Frame = +2
Query: 323 PGTDVSDRISSEVNPS--PCESESTSN-SPPSLLQDATLPALLVSGT-----STLFQTTA 478
PG+ S SS NPS P + ST S S + +T+ VSG+ STL +TA
Sbjct: 316 PGSSTSPAPSSSPNPSSSPASTGSTITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTA 375
Query: 479 TPNTSNTVDSLCLPGTS 529
TP +S+TV S P S
Sbjct: 376 TPGSSSTVPSSSSPQPS 392
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 35.1 bits (77), Expect = 0.050
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Frame = +2
Query: 323 PGTDVSDRISSEVNPS--PCESESTSN-SPPSLLQDATLPALLVSGT-----STLFQTTA 478
PG+ S SS NPS P + ST S S + +T+ VSG+ STL +TA
Sbjct: 523 PGSSTSPAPSSSPNPSSSPASTGSTITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTA 582
Query: 479 TPNTSNTVDSLCLPGTS 529
TP +S+TV S P S
Sbjct: 583 TPGSSSTVPSSSSPQPS 599
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 35.1 bits (77), Expect = 0.050
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Frame = +2
Query: 323 PGTDVSDRISSEVNPS--PCESESTSN-SPPSLLQDATLPALLVSGT-----STLFQTTA 478
PG+ S SS NPS P + ST S S + +T+ VSG+ STL +TA
Sbjct: 523 PGSSTSPAPSSSPNPSSSPASTGSTITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTA 582
Query: 479 TPNTSNTVDSLCLPGTS 529
TP +S+TV S P S
Sbjct: 583 TPGSSSTVPSSSSPQPS 599
>U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical
protein ZK813.5 protein.
Length = 471
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = +2
Query: 311 PRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNT 490
PR S ++ NPSP + S+ P S+ Q+ LP + S TP+
Sbjct: 363 PRIKSEASPSYQLRPNWNPSPSVTSYESDPPSSVTQETNLPITSIPPVSVPASANCTPSP 422
Query: 491 SNT 499
S T
Sbjct: 423 SET 425
>U23139-8|AAK31491.2| 1051|Caenorhabditis elegans Biotin protein
ligase protein 1,isoform a protein.
Length = 1051
Score = 31.5 bits (68), Expect = 0.62
Identities = 22/68 (32%), Positives = 29/68 (42%)
Frame = +2
Query: 299 SAKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTA 478
S + P P P D S+R SE + ES + PP T+P + S L Q TA
Sbjct: 352 SDRTPTPYPPAD-SERPISEASSCHSESPPRDSKPPRSPSRVTIPTIDFSRLPPLAQQTA 410
Query: 479 TPNTSNTV 502
S +V
Sbjct: 411 RSKRSTSV 418
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.1 bits (67), Expect = 0.82
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 305 KRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATP 484
+R + D G + D + E + + +T+ ++ T+P + T+ + +T+TP
Sbjct: 256 RRMKRDAGDNTCD-YTIESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTP 314
Query: 485 NTSNTVDSLCLPGTS 529
+TS T++S TS
Sbjct: 315 STSTTIESTSTTFTS 329
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.1 bits (67), Expect = 0.82
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +2
Query: 305 KRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATP 484
+R + D G + D + E + + +T+ ++ T+P + T+ + +T+TP
Sbjct: 256 RRMKRDAGDNTCD-YTIESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTP 314
Query: 485 NTSNTVDSLCLPGTS 529
+TS T++S TS
Sbjct: 315 STSTTIESTSTTFTS 329
>Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical
protein T05F1.5 protein.
Length = 366
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +2
Query: 362 NPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSNTVDSLCL-----PGT 526
+PSP S S+ PPS + D +L S S +F+TT NTS+ L L GT
Sbjct: 94 SPSPTSSPQLSSPPPSTMVD-SLSTHSESSRSNIFETTR--NTSHRQQGLDLVEDDVAGT 150
Query: 527 SEVD 538
+VD
Sbjct: 151 LQVD 154
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +2
Query: 302 AKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTAT 481
A P P P ++ + +P+P E + +PPS L + ++G S F+T
Sbjct: 210 APEPVPAPVEQIAPPPAPVQDPAPAPVEPSDPAPPSKLPSPSKSCTDLAGGSQRFKTGPH 269
Query: 482 PNTSNTVDSL 511
P S++ +L
Sbjct: 270 PMQSSSFHNL 279
>U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical
protein EEED8.11 protein.
Length = 304
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +2
Query: 365 PSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSNTVDSLCLPG 523
P + STS S P+ T T+T TT TP + T +C G
Sbjct: 54 PKSTSTPSTSTSTPTTTTTTTTTTTTTPTTTTTTTTTTTPEPTTTKVKVCPQG 106
>AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical
protein Y48C3A.12 protein.
Length = 675
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +2
Query: 293 ETSAKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTS 457
+TSA P GT I + P E T+N PP LPAL+ + TS
Sbjct: 375 QTSAPHSTPY-GTPKDTHIQQQQQPVVFEEILTANGPPPQPSSPLLPALITTTTS 428
>Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical
protein K04D7.4 protein.
Length = 1159
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -2
Query: 678 PPVLSSFINQATAEDEEVAHRPPDDVKGSARPPKVVVVAHPLTIPQLSTSEVP 520
PP + I T+E EV PPD++ G V++ A TIP+ T + P
Sbjct: 240 PPQIQK-IRNITSECVEVTITPPDEMNGELDKYLVLIQAVNETIPRKMTFDKP 291
>Z48543-1|CAA88432.1| 645|Caenorhabditis elegans Hypothetical
protein C18D1.1 protein.
Length = 645
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +2
Query: 350 SSEVNPSPCES-ESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSNTVDS 508
+ V+ P E ES+ + PP++ ++TL +++ TST + +A +T+++VDS
Sbjct: 131 AKSVDQEPEEQRESSPSPPPAVSLNSTLASMVFPTTSTATECSAA-STTSSVDS 183
>U58755-12|ABJ99069.1| 205|Caenorhabditis elegans Hypothetical
protein C34D4.4b protein.
Length = 205
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 14 LLAHQLFTNTIFFFYFLREYYNTKFLIRY 100
+LAH F FFYF ++ F++++
Sbjct: 34 VLAHLSFKGAALFFYFFANFFTNSFIVQF 62
>U58755-11|AAB00701.1| 247|Caenorhabditis elegans Hypothetical
protein C34D4.4a protein.
Length = 247
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 14 LLAHQLFTNTIFFFYFLREYYNTKFLIRY 100
+LAH F FFYF ++ F++++
Sbjct: 76 VLAHLSFKGAALFFYFFANFFTNSFIVQF 104
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/79 (30%), Positives = 32/79 (40%)
Frame = +2
Query: 293 ETSAKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQT 472
+ AK+ D+ + P+P S S+SP S DA PA G + T
Sbjct: 2789 KAKAKKDAEAAKKAAEDKKKAAEAPAPAPSAEQSDSPAS--PDAPAPAPEEIGLA----T 2842
Query: 473 TATPNTSNTVDSLCLPGTS 529
A NT+NTV P S
Sbjct: 2843 PAATNTTNTVSESVAPNAS 2861
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Frame = +2
Query: 326 GTDVSDRISSEVNPSPCESESTSNS-----PPSLLQDATLPALLVSGTSTLFQTTATPNT 490
G+ V+ SS + P S+ST+ S PP + SGT+ QTT +T
Sbjct: 625 GSTVTQAPSSSTSMGPSPSQSTAGSTMTSAPPVTSSSSANTGSTSSGTTVSVQTTQVSST 684
Query: 491 SNTVDSLCLPGTSEVDSCG 547
++ V S TS G
Sbjct: 685 TSPVASSSSQMTSTQQPSG 703
>U80439-9|AAO38675.1| 661|Caenorhabditis elegans Hypothetical
protein C01G8.9b protein.
Length = 661
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 329 TDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTL-FQTTATPNTSNTVD 505
TD + S+ + + +STS+SP + + A ++ V G TL +T++ P +S
Sbjct: 507 TDDKESTSTNSDAAAPPQKSTSSSPKPVEESAATTSVNVHGNGTLECETSSRPLSSEAAA 566
Query: 506 SLCLP 520
++ P
Sbjct: 567 AVITP 571
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 329 TDVSDRISSEVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTL-FQTTATPNTSNTVD 505
TD + S+ + + +STS+SP + + A ++ V G TL +T++ P +S
Sbjct: 1570 TDDKESTSTNSDAAAPPQKSTSSSPKPVEESAATTSVNVHGNGTLECETSSRPLSSEAAA 1629
Query: 506 SLCLP 520
++ P
Sbjct: 1630 AVITP 1634
>U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical
protein ZC13.3 protein.
Length = 732
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 383 ESTSNSPPSLLQDATLPALLVSGTSTLFQTTATPNTSNT 499
E TS +P L + + ++GT QTT TP T+ T
Sbjct: 434 EPTSQAPLILGRTTQPKEVTIAGTKRRIQTTPTPTTTTT 472
>U41272-2|AAA82447.1| 143|Caenorhabditis elegans Hypothetical
protein T03G11.5 protein.
Length = 143
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +2
Query: 356 EVNPSPCESESTSNSPPSLLQDATLPALLVSGTSTLFQTT--ATPNTSNTVDSLCLPGTS 529
E + PCE E + P LVSGT+T TT T TS+T +++ LP S
Sbjct: 56 ETSSDPCECE-VKHCPQKCF------TALVSGTTTALATTRPTTTATSSTFNNITLPENS 108
Query: 530 E 532
+
Sbjct: 109 K 109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,907,264
Number of Sequences: 27780
Number of extensions: 260399
Number of successful extensions: 1031
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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