Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0816
(622 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A0FDQ8 Cluster: Putative uncharacterized protein; n=1; ... 212 5e-54
UniRef50_Q5MGF8 Cluster: Putative uncharacterized protein; n=1; ... 49 8e-05
UniRef50_Q23915 Cluster: Protein kinase; n=2; Dictyostelium disc... 36 0.78
UniRef50_A2QNR6 Cluster: Complex: cut3/SMC4 of S. pombe is a sub... 35 1.4
UniRef50_Q0J0T7 Cluster: Os09g0484200 protein; n=3; Magnoliophyt... 34 2.4
UniRef50_Q871Y7 Cluster: Putative uncharacterized protein B9K17.... 34 2.4
UniRef50_Q4S5Q5 Cluster: Chromosome 9 SCAF14729, whole genome sh... 34 3.1
UniRef50_Q54FV6 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_Q6CEV2 Cluster: COPII coat assembly protein SEC16; n=2;... 33 4.2
UniRef50_A7TT15 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
>UniRef50_A0FDQ8 Cluster: Putative uncharacterized protein; n=1;
Bombyx mori|Rep: Putative uncharacterized protein -
Bombyx mori (Silk moth)
Length = 272
Score = 212 bits (518), Expect = 5e-54
Identities = 114/151 (75%), Positives = 114/151 (75%)
Frame = +1
Query: 100 MKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEVAPKIDDSXXXXXXXXXXXXXXXXXXX 279
MKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEVAPKIDDS
Sbjct: 1 MKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAATEEKKAEPAP 60
Query: 280 XSNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVE 459
SNDEVPAIPEAKKDDIAPEDSDIA AKSSEIPDAEAKSADIKVE
Sbjct: 61 VSNDEVPAIPEAKKDDIAPEDSDIAKPETVPEVKTEEKVPEAKSSEIPDAEAKSADIKVE 120
Query: 460 EPAAQPEDSKTEVQATVAEISKEEKPIATDA 552
EPAAQPEDSKTEVQATVAEISKEEKP ATDA
Sbjct: 121 EPAAQPEDSKTEVQATVAEISKEEKPSATDA 151
Score = 46.8 bits (106), Expect = 4e-04
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +2
Query: 554 EGSADSAAIIPNMVKKIDLAPNV 622
EGSADSAAIIPNMVKKIDLAP V
Sbjct: 152 EGSADSAAIIPNMVKKIDLAPTV 174
>UniRef50_Q5MGF8 Cluster: Putative uncharacterized protein; n=1;
Lonomia obliqua|Rep: Putative uncharacterized protein -
Lonomia obliqua (Moth)
Length = 206
Score = 49.2 bits (112), Expect = 8e-05
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +1
Query: 97 KMKVLLLCIAFAAVSLAMPVAEEKDVVPAQPI 192
+MKVLLLC+AFAAVS+AMPVAEEK V P+
Sbjct: 18 RMKVLLLCMAFAAVSMAMPVAEEKPEVAEVPV 49
>UniRef50_Q23915 Cluster: Protein kinase; n=2; Dictyostelium
discoideum|Rep: Protein kinase - Dictyostelium discoideum
(Slime mold)
Length = 1094
Score = 35.9 bits (79), Expect = 0.78
Identities = 25/86 (29%), Positives = 32/86 (37%)
Frame = +1
Query: 292 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAA 471
E P E ++I PE+ K+ E AE D+KVEEP
Sbjct: 858 EEPTKVEEPVEEIKPEEPTKVEESVEDVKVEDVKVEEVKAEEPTKAEESVEDVKVEEPIK 917
Query: 472 QPEDSKTEVQATVAEISKEEKPIATD 549
E K E V E K E+PI +
Sbjct: 918 VEEPVKVEEPVKVEEPVKVEEPIKVE 943
>UniRef50_A2QNR6 Cluster: Complex: cut3/SMC4 of S. pombe is a
subunit of the SMC; n=7; Eukaryota|Rep: Complex:
cut3/SMC4 of S. pombe is a subunit of the SMC -
Aspergillus niger
Length = 1309
Score = 35.1 bits (77), Expect = 1.4
Identities = 22/55 (40%), Positives = 28/55 (50%)
Frame = +1
Query: 406 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPIATDARRFCRL 570
+S EIP AE K I +E +A S + Q V E+S E KP TDA + L
Sbjct: 827 RSEEIPRAETKIQKIMIEIESANR--SLADAQRRVKELSAEHKPSKTDASQAAAL 879
>UniRef50_Q0J0T7 Cluster: Os09g0484200 protein; n=3;
Magnoliophyta|Rep: Os09g0484200 protein - Oryza sativa
subsp. japonica (Rice)
Length = 150
Score = 34.3 bits (75), Expect = 2.4
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +1
Query: 289 DEVPAIP-EAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVE-- 459
+E PA P EA ++ AP ++++A K +E AE ++ K E
Sbjct: 35 EETPAAPAEAVAEEAAPAEAEVAETKEAEPAAAEPAAEEVKEAEPEPAEPEAEPAKEEVA 94
Query: 460 -EPAA--QPEDSKTEVQATVAEISKEEK 534
EPAA + E + E A VAE KEE+
Sbjct: 95 PEPAAAAEAEAKEAEPAAQVAEEVKEEE 122
>UniRef50_Q871Y7 Cluster: Putative uncharacterized protein
B9K17.020; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein B9K17.020 - Neurospora crassa
Length = 1417
Score = 34.3 bits (75), Expect = 2.4
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = +1
Query: 292 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAA 471
E P + E + APE+S+I + +E P AEA A E
Sbjct: 407 EAPVVEEVEAS--APEESNIEEKTETPVVEEAETPAHEEKAEAPVAEAIEAPASEETVET 464
Query: 472 QPEDSKTEVQATVAE-ISKEEKPIAT 546
++KTE Q E +KEE+P+A+
Sbjct: 465 SAPETKTESQEEKPETTAKEEEPVAS 490
>UniRef50_Q4S5Q5 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 9
SCAF14729, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 531
Score = 33.9 bits (74), Expect = 3.1
Identities = 29/133 (21%), Positives = 45/133 (33%)
Frame = +1
Query: 145 AMPVAEEKDVVPAQPILEVAPKIDDSXXXXXXXXXXXXXXXXXXXXSNDEVPAIPEAKKD 324
A PV E P +P E AP + +E PA+P ++
Sbjct: 322 APPVKIETQAPPFEPQNEAAPAETEDQFPPAETDKQALSAEEDAAAGTEEEPALPAELEE 381
Query: 325 DIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQA 504
+ A D A+ ++ E + A+ EE +PE + +Q
Sbjct: 382 EAAAHDE---AQQEVTGNVASAEDTPAEKEDVDSLETEEAENTAEEVPKEPEVQQESIQE 438
Query: 505 TVAEISKEEKPIA 543
EI EE+P A
Sbjct: 439 QKDEILGEEEPQA 451
>UniRef50_Q54FV6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 472
Score = 33.9 bits (74), Expect = 3.1
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 406 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPIATDAR 555
K E E + + KVEEP A+ E+ K E + VAE K E+P+ + +
Sbjct: 402 KVEEPISEEEEKVEEKVEEPVAEQEEEKVE-EPVVAEEEKVEEPVTEEEK 450
>UniRef50_Q6CEV2 Cluster: COPII coat assembly protein SEC16; n=2;
root|Rep: COPII coat assembly protein SEC16 - Yarrowia
lipolytica (Candida lipolytica)
Length = 2183
Score = 33.5 bits (73), Expect = 4.2
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +1
Query: 436 KSADIKVEEPAAQPEDS-----KTEVQATVAEISKEEKPIATDARRFCRLSCHHSQHGEE 600
++ D+ V P ED K E+ VAEI + E P+A+D F LS + GEE
Sbjct: 197 ETVDVVVPVPVEPEEDEQESEVKAEIDPVVAEIEQPEPPMASDKDFFSTLS--KEEDGEE 254
Query: 601 D 603
D
Sbjct: 255 D 255
>UniRef50_A7TT15 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1934
Score = 32.7 bits (71), Expect = 7.3
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = -3
Query: 551 ASVAIGFSSFEISATVACTSVFESSG*AAGSSTLISADFA-SASGI-SDDFAXXXXXXXX 378
+SVA+ S E S+TV +SV SS SST+ S+ A S+SG+ S
Sbjct: 1405 SSVAVSSSGVESSSTVESSSVGVSSSGVESSSTVESSSVAISSSGVESSSAVESSSVAVS 1464
Query: 377 XXXXXXXFAISESSGAISSFLASGIAGTSSL 285
A+ SS A+SS SG+ +S++
Sbjct: 1465 SSGVESSSAVESSSVAVSS---SGVESSSAV 1492
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,533,266
Number of Sequences: 1657284
Number of extensions: 7026488
Number of successful extensions: 21736
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21628
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -