Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0816
(622 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-P... 31 0.95
AY052048-1|AAK93472.1| 537|Drosophila melanogaster LP06937p pro... 29 5.1
AE014297-2561|AAN13783.1| 537|Drosophila melanogaster CG7702-PB... 29 5.1
AE014297-2560|AAF55580.1| 537|Drosophila melanogaster CG7702-PA... 29 5.1
AE014297-674|AAF54169.1| 549|Drosophila melanogaster CG11094-PA... 28 8.9
>AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-PA
protein.
Length = 9196
Score = 31.5 bits (68), Expect = 0.95
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +1
Query: 406 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPIATD 549
KSS P+ + KS + K E+ A+P+DS V T I KE TD
Sbjct: 6359 KSSLHPEEKPKSPEKKDEKVLAKPDDSSKSVVETDKPIPKEYSDDETD 6406
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 406 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPIATD 549
KSS P+ + KS + K E+ +P+DS V T I KE TD
Sbjct: 3357 KSSLHPEEKPKSPEKKDEKVLPKPDDSSKSVVKTDKPIPKEYSDDETD 3404
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 406 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPIATD 549
KS P+ + KS + K E+ A+P+DS V T I KE TD
Sbjct: 5201 KSPLHPEEKPKSPEKKDEKVLAKPDDSSKSVVETDKPIPKEYSDDETD 5248
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 406 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPIATD 549
KSS P+ + KS + K E+ +P+DS V T I KE TD
Sbjct: 5429 KSSLHPEEKPKSPEKKDEKVLPKPDDSSKSVVETDKPIPKEYSDDETD 5476
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 406 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPIATD 549
KS P+ + KS + K E+ A+P+DS V T I KE TD
Sbjct: 5885 KSPLHPEEKPKSPEKKDEKVLAKPDDSSKSVVETDKPIPKEYSDDETD 5932
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 406 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPIATD 549
KS P+ + KS + K E+ A+P+DS V T I KE TD
Sbjct: 6739 KSPLHPEEKPKSPEKKDEKVLAKPDDSSKSVVKTDKPIPKEYSDDETD 6786
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 406 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPIATD 549
KS P+ + KS + K E+ A+P+DS V T I KE TD
Sbjct: 7955 KSPLHPEEKPKSPEKKDEKVLAKPDDSSKSVVETDKPIPKEYSDDETD 8002
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 406 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPIATD 549
KSS P+ + KS + K E+ A+P+DS V T KE TD
Sbjct: 7347 KSSLHPEEKPKSPEKKDEKVLAKPDDSSKSVVETDKPSPKEYSDDETD 7394
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 406 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPIATD 549
KSS P+ + KS + K E+ A+P+DS V T KE TD
Sbjct: 7575 KSSLHPEEKPKSPEKKDEKVLAKPDDSSKSVVETDKPSPKEYSDDETD 7622
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 406 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPIATD 549
KS P+ + KS D K E+ A+P+DS V T KE TD
Sbjct: 6891 KSPLHPEEKPKSPDKKDEKVLAKPDDSSKSVVETDKPSPKEYSDDETD 6938
>AY052048-1|AAK93472.1| 537|Drosophila melanogaster LP06937p
protein.
Length = 537
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 97 KMKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEV 201
K K+LLL +A AA+ LA V + + +P QP+ +
Sbjct: 2 KHKLLLLFLAGAALLLATEVRSQHEDIPYQPVSNI 36
>AE014297-2561|AAN13783.1| 537|Drosophila melanogaster CG7702-PB,
isoform B protein.
Length = 537
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 97 KMKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEV 201
K K+LLL +A AA+ LA V + + +P QP+ +
Sbjct: 2 KHKLLLLFLAGAALLLATEVRSQHEDIPYQPVSNI 36
>AE014297-2560|AAF55580.1| 537|Drosophila melanogaster CG7702-PA,
isoform A protein.
Length = 537
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 97 KMKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEV 201
K K+LLL +A AA+ LA V + + +P QP+ +
Sbjct: 2 KHKLLLLFLAGAALLLATEVRSQHEDIPYQPVSNI 36
>AE014297-674|AAF54169.1| 549|Drosophila melanogaster CG11094-PA,
isoform A protein.
Length = 549
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 436 KSADIKVEEPAAQPEDSKTEVQATVAEI 519
K AD +EE + + E+++ E+ TVA+I
Sbjct: 382 KDADANIEEASRRIEEARVEINRTVAQI 409
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,909,539
Number of Sequences: 53049
Number of extensions: 330534
Number of successful extensions: 1190
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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