Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0815
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.72 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   0.72 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.9  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   8.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.9  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = -3

Query: 528 VPLRLSYG--GLVL--VSHLYAVISRFCVLDQYLSYFFLSVIFNRF 403
           +PL L Y   G++   +S  ++ +SRF  L  Y  +F+LS I+  +
Sbjct: 53  LPLTLLYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTY 98


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = -3

Query: 528 VPLRLSYG--GLVL--VSHLYAVISRFCVLDQYLSYFFLSVIFNRF 403
           +PL L Y   G++   +S  ++ +SRF  L  Y  +F+LS I+  +
Sbjct: 9   LPLTLLYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTY 54


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
 Frame = -3

Query: 585 LSVAFVWRLVE-TRAATLLSVPLRLSYGGLVLVSHLYAVISRFC-VLDQYLSYFFLSVIF 412
           +S A  +R  + TR    ++     S    + ++  Y  +   C +LD+ LSY  L+   
Sbjct: 235 ISTALAYRFGQITRRIAAVASEKVTSEKSWIALNDDYNRLCHLCFLLDEKLSYIILTSFL 294

Query: 411 NRFVCQIYYANFSRFKL 361
           N F   I+   F  F L
Sbjct: 295 NNFYFIIFQV-FESFYL 310


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 522 LRLSYGGLVLVSHLYAVISRFCVLDQYLS 436
           LRL   G +    ++   S+ C L Q+LS
Sbjct: 206 LRLKPEGRISNRRVFISFSKICYLHQHLS 234


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 522 LRLSYGGLVLVSHLYAVISRFCVLDQYLS 436
           LRL   G +    ++   S+ C L Q+LS
Sbjct: 224 LRLKPEGRISNRRVFISFSKICYLHQHLS 252


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 503 PPYDKRSGTLSSVAARVSTKRHTKA 577
           PP    SG+ +SVA+  S   H  A
Sbjct: 35  PPATTSSGSPASVASNASAPLHIPA 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,166
Number of Sequences: 336
Number of extensions: 3148
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)