Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0811
(631 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synth... 254 7e-70
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 1.9
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 23 2.4
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 3.2
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 5.7
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 5.7
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 21 9.9
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.9
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 21 9.9
>AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synthase
16 kDa proteolipidsubunit protein.
Length = 156
Score = 254 bits (621), Expect = 7e-70
Identities = 127/134 (94%), Positives = 130/134 (97%)
Frame = +1
Query: 1 AIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQ 180
AIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAG L+
Sbjct: 21 AIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGGLE 80
Query: 181 EPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAE 360
EP Y L+KGF+HLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAE
Sbjct: 81 EPKGYTLFKGFVHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAE 140
Query: 361 VLGLYGLIVAIYLY 402
VLGLYGLIVAIYLY
Sbjct: 141 VLGLYGLIVAIYLY 154
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.4 bits (48), Expect = 1.9
Identities = 18/81 (22%), Positives = 36/81 (44%)
Frame = -2
Query: 405 CVQVDGDDKSVKTQYFSENKNKNHSDE*PRLLSSTTHACISHDAYGETGSQTRESYSQTS 226
C+ D +S+ TQ+ +++ HSD L S +A I + + E+ ++ T
Sbjct: 328 CLDCDEIRESLDTQFLQVCRSRRHSDSCCLCLDS-MNAVIRN--FNESENRRNSCLGSTE 384
Query: 225 TQVDEPFVKGVVGWLLEGTSN 163
T + + ++ E +SN
Sbjct: 385 TYYSKHNTQQFTQYIPESSSN 405
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -2
Query: 165 NQDSHDQTVDGNNTRHDDRNDRLHDQLRPHHRH 67
NQ H D N ++ ND+ H + ++RH
Sbjct: 430 NQARHSSKSDNQN--NNQHNDQAHHSSKSNNRH 460
Score = 21.4 bits (43), Expect = 7.5
Identities = 8/33 (24%), Positives = 15/33 (45%)
Frame = -2
Query: 165 NQDSHDQTVDGNNTRHDDRNDRLHDQLRPHHRH 67
NQD++ + N RH ++D ++ H
Sbjct: 419 NQDNNHYNHNHNQARHSSKSDNQNNNQHNDQAH 451
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 22.6 bits (46), Expect = 3.2
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 322 LFVGMI-LILIFAEVLGLYGLIVAIY 396
L VG + LILIF V G + VAIY
Sbjct: 26 LLVGFLFLILIFLSVAGNILVCVAIY 51
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 115 VMAGIIAIYGLVVAVLIAGALQEPANY 195
+++G+I GL++ VLI G++ E +
Sbjct: 413 IVSGLIT--GLIMRVLICGSISEEQKF 437
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 5.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 88 LIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPL 201
L++ SII + G I + VAV + L+ P NY L
Sbjct: 46 LVLGSIIVGTVIGNILV---CVAVFLVRKLRRPCNYLL 80
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 21.0 bits (42), Expect = 9.9
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 290 ASPTMPMAKPAARPENPTAKPAPKWMNPL 204
AS TM M K PEN W N L
Sbjct: 51 ASKTMAMMKGEYIPENALPVGIEIWRNKL 79
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 570 PARFHISPDRCTLLLRL 620
PA +SP+ TL+LRL
Sbjct: 1503 PAATFLSPNSTTLVLRL 1519
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 570 PARFHISPDRCTLLLRL 620
PA +SP+ TL+LRL
Sbjct: 1499 PAATFLSPNSTTLVLRL 1515
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 537 APFHSCILHLFPARFHISPDRCTLLL 614
AP H I+HLF +++ C L
Sbjct: 27 APGHDAIVHLFEWKWNDIAKECEQFL 52
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,051
Number of Sequences: 438
Number of extensions: 4407
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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