SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0807
         (560 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q14061 Cluster: Cytochrome c oxidase copper chaperone; ...    93   4e-18
UniRef50_Q5U537 Cluster: LOC495379 protein; n=6; Coelomata|Rep: ...    92   9e-18
UniRef50_Q7Z0T7 Cluster: Cytochrome C oxidase copper chaperone; ...    73   3e-12
UniRef50_Q9P7Z7 Cluster: Cytochrome c oxidase copper chaperone; ...    71   1e-11
UniRef50_Q5KCT7 Cluster: Putative uncharacterized protein; n=1; ...    68   1e-10
UniRef50_Q9LKH0 Cluster: Putative copper chaperone Cox17; n=2; V...    65   1e-09
UniRef50_A4S718 Cluster: Cytochrome c oxidase Cu chaperone; COX1...    62   9e-09
UniRef50_A0D9G5 Cluster: Chromosome undetermined scaffold_42, wh...    62   9e-09
UniRef50_A7ALZ7 Cluster: Cytochrome c oxidase copper chaperone (...    60   3e-08
UniRef50_Q4MYK4 Cluster: Cytochrome c oxidase assembly protein, ...    58   1e-07
UniRef50_Q4WWZ9 Cluster: Cytochrome c oxidase copper chaperone C...    57   2e-07
UniRef50_Q7RI08 Cluster: Copper chaperone COX17-1; n=5; Eukaryot...    56   4e-07
UniRef50_A5DNS8 Cluster: Putative uncharacterized protein; n=2; ...    55   1e-06
UniRef50_Q12287 Cluster: Cytochrome c oxidase copper chaperone; ...    53   5e-06
UniRef50_Q4H1E2 Cluster: Cytochrome c oxidase copper chaperone, ...    51   2e-05
UniRef50_A6SM14 Cluster: Cytochrome c oxidase copper chaperone p...    50   5e-05
UniRef50_A5DUX2 Cluster: Predicted protein; n=1; Lodderomyces el...    48   1e-04
UniRef50_Q0TZC3 Cluster: Putative uncharacterized protein; n=1; ...    47   3e-04
UniRef50_Q70J60 Cluster: COX17 protein; n=6; Pezizomycotina|Rep:...    45   0.001
UniRef50_Q582X7 Cluster: Cytochrome c oxidase copper chaperone, ...    44   0.002
UniRef50_A0C955 Cluster: Chromosome undetermined scaffold_16, wh...    38   0.21 
UniRef50_Q4T8R6 Cluster: Chromosome undetermined SCAF7739, whole...    34   2.0  
UniRef50_Q00VH9 Cluster: Chromosome 15 contig 1, DNA sequence; n...    34   2.6  
UniRef50_A2R033 Cluster: Contig An12c0220, complete genome; n=1;...    33   3.4  
UniRef50_Q9U0W0 Cluster: Putative chaperone; n=5; Trypanosomatid...    33   4.6  
UniRef50_UPI00005459A3 Cluster: PREDICTED: hypothetical protein ...    32   8.0  

>UniRef50_Q14061 Cluster: Cytochrome c oxidase copper chaperone;
           n=23; Eumetazoa|Rep: Cytochrome c oxidase copper
           chaperone - Homo sapiens (Human)
          Length = 63

 Score = 93.1 bits (221), Expect = 4e-18
 Identities = 39/52 (75%), Positives = 43/52 (82%)
 Frame = +1

Query: 124 PENVEKPKLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFNI 279
           PE+ EK  LKPCCACPETK+ARDACIIE GEE+CG LIE HK CMR +GF I
Sbjct: 12  PESQEKKPLKPCCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>UniRef50_Q5U537 Cluster: LOC495379 protein; n=6; Coelomata|Rep:
           LOC495379 protein - Xenopus laevis (African clawed frog)
          Length = 67

 Score = 91.9 bits (218), Expect = 9e-18
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = +1

Query: 118 PAPENVEKPKLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFNI 279
           P+ E+ EK  LKPCCACPETK+ARDACIIENGEE C  LIE HK CMR +GF +
Sbjct: 14  PSAESQEKKPLKPCCACPETKKARDACIIENGEEKCQHLIEAHKECMRSLGFKV 67


>UniRef50_Q7Z0T7 Cluster: Cytochrome C oxidase copper chaperone;
           n=1; Schistosoma japonicum|Rep: Cytochrome C oxidase
           copper chaperone - Schistosoma japonicum (Blood fluke)
          Length = 68

 Score = 73.3 bits (172), Expect = 3e-12
 Identities = 30/51 (58%), Positives = 39/51 (76%)
 Frame = +1

Query: 127 ENVEKPKLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFNI 279
           ++ +KP LKPCCACPET+  RD CI+ +GEE C  LI EHK C+RK+GF +
Sbjct: 19  DDQDKP-LKPCCACPETRLKRDQCILMHGEEMCADLIMEHKECLRKLGFTM 68


>UniRef50_Q9P7Z7 Cluster: Cytochrome c oxidase copper chaperone;
           n=3; Fungi/Metazoa group|Rep: Cytochrome c oxidase
           copper chaperone - Schizosaccharomyces pombe (Fission
           yeast)
          Length = 70

 Score = 71.3 bits (167), Expect = 1e-11
 Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
 Frame = +1

Query: 70  MGNASAKAVEVKVLEGPAP-ENVEKPKLKPCCACPETKRARDACIIE--NGEENCGPLIE 240
           M +++  +   KV E PAP  + EKPK  PCCACPETK+ARDAC+++  NG   C  LIE
Sbjct: 1   MSSSTEPSTATKVSE-PAPIASEEKPK--PCCACPETKQARDACMLQSSNGPIECAKLIE 57

Query: 241 EHKACMRKMGFNI 279
            HK CM + G+ +
Sbjct: 58  AHKKCMAQYGYEV 70


>UniRef50_Q5KCT7 Cluster: Putative uncharacterized protein; n=1;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 89

 Score = 68.1 bits (159), Expect = 1e-10
 Identities = 30/48 (62%), Positives = 34/48 (70%), Gaps = 4/48 (8%)
 Frame = +1

Query: 148 LKPCCACPETKRARDACIIEN----GEENCGPLIEEHKACMRKMGFNI 279
           LKPCCACPETK+ARD C I++    GE NC   IE HKACMR  GF +
Sbjct: 42  LKPCCACPETKQARDDCFIKSAPGEGETNCRDFIEAHKACMRGYGFKV 89


>UniRef50_Q9LKH0 Cluster: Putative copper chaperone Cox17; n=2;
           Viridiplantae|Rep: Putative copper chaperone Cox17 -
           Chlamydomonas reinhardtii
          Length = 81

 Score = 64.9 bits (151), Expect = 1e-09
 Identities = 33/61 (54%), Positives = 39/61 (63%), Gaps = 7/61 (11%)
 Frame = +1

Query: 118 PAPENVE-----KPKLKPCCACPETKRARDACIIENGEEN--CGPLIEEHKACMRKMGFN 276
           PAP  V      KPK K CC+CP+TK+ RD CI E GEE+  C  LIE HKAC+R  GF 
Sbjct: 22  PAPPGVPIGPDGKPK-KICCSCPDTKKLRDTCIAERGEEHAYCQALIEAHKACLRVEGFK 80

Query: 277 I 279
           +
Sbjct: 81  V 81


>UniRef50_A4S718 Cluster: Cytochrome c oxidase Cu chaperone; COX17;
           n=1; Ostreococcus lucimarinus CCE9901|Rep: Cytochrome c
           oxidase Cu chaperone; COX17 - Ostreococcus lucimarinus
           CCE9901
          Length = 65

 Score = 62.1 bits (144), Expect = 9e-09
 Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
 Frame = +1

Query: 127 ENVEKPKLKPCCACPETKRARDACIIENGEEN---CGPLIEEHKACMRKMGFNI 279
           E  EKPK K CCACPETKRARD C++ +G +    C   IE+H  C+R  GF++
Sbjct: 13  ETKEKPK-KICCACPETKRARDECVVTHGADEDGACREKIEQHLKCLRAEGFDV 65


>UniRef50_A0D9G5 Cluster: Chromosome undetermined scaffold_42, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_42,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 59

 Score = 62.1 bits (144), Expect = 9e-09
 Identities = 25/41 (60%), Positives = 29/41 (70%)
 Frame = +1

Query: 151 KPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGF 273
           K C ACPET++ RD CII NGEE C   IE HK C++K GF
Sbjct: 18  KACSACPETRQLRDECIIFNGEEQCKKEIENHKVCLKKYGF 58


>UniRef50_A7ALZ7 Cluster: Cytochrome c oxidase copper chaperone
           (COX17), putative; n=1; Babesia bovis|Rep: Cytochrome c
           oxidase copper chaperone (COX17), putative - Babesia
           bovis
          Length = 70

 Score = 60.5 bits (140), Expect = 3e-08
 Identities = 27/70 (38%), Positives = 39/70 (55%)
 Frame = +1

Query: 70  MGNASAKAVEVKVLEGPAPENVEKPKLKPCCACPETKRARDACIIENGEENCGPLIEEHK 249
           MG++ +  ++     G A  +      K CC C ETK ARD C+ ++GEE C  LI+ H 
Sbjct: 1   MGSSQSHIIDSGA-SGQASSSTLTTGKKICCVCKETKLARDECVAKHGEEQCKELIDLHN 59

Query: 250 ACMRKMGFNI 279
            C+RK GF +
Sbjct: 60  QCLRKEGFTV 69


>UniRef50_Q4MYK4 Cluster: Cytochrome c oxidase assembly protein,
           putative; n=1; Theileria parva|Rep: Cytochrome c oxidase
           assembly protein, putative - Theileria parva
          Length = 77

 Score = 58.0 bits (134), Expect = 1e-07
 Identities = 21/41 (51%), Positives = 27/41 (65%)
 Frame = +1

Query: 157 CCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFNI 279
           CC C ETK+ARD CI +NG+E C   IE H  C++  GF +
Sbjct: 35  CCVCKETKQARDDCIAQNGQEQCKKFIEAHNKCLKDEGFTV 75


>UniRef50_Q4WWZ9 Cluster: Cytochrome c oxidase copper chaperone
           Cox17, putative; n=4; Ascomycota|Rep: Cytochrome c
           oxidase copper chaperone Cox17, putative - Aspergillus
           fumigatus (Sartorya fumigata)
          Length = 76

 Score = 57.2 bits (132), Expect = 2e-07
 Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
 Frame = +1

Query: 115 GPAP---ENVEKPKLKPCCACPETKRARDACII----ENGEENCGPLIEEHKACMRKMGF 273
           GPAP   E  EKPK  PCC C   K ARD C++    ++  + C PLIE++KACM   GF
Sbjct: 17  GPAPAQQEPTEKPK--PCCVCKTEKSARDDCMLFSKTDDPSQECKPLIEQYKACMAGYGF 74

Query: 274 NI 279
            +
Sbjct: 75  KV 76


>UniRef50_Q7RI08 Cluster: Copper chaperone COX17-1; n=5;
           Eukaryota|Rep: Copper chaperone COX17-1 - Plasmodium
           yoelii yoelii
          Length = 66

 Score = 56.4 bits (130), Expect = 4e-07
 Identities = 22/45 (48%), Positives = 28/45 (62%)
 Frame = +1

Query: 145 KLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFNI 279
           K K CC C +TK+ RD CI+  GEE C   I +H  C+R  GF+I
Sbjct: 21  KKKICCVCLDTKKLRDECIVNLGEEQCKKYINDHNQCLRNEGFDI 65


>UniRef50_A5DNS8 Cluster: Putative uncharacterized protein; n=2;
           Ascomycota|Rep: Putative uncharacterized protein -
           Pichia guilliermondii (Yeast) (Candida guilliermondii)
          Length = 54

 Score = 54.8 bits (126), Expect = 1e-06
 Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
 Frame = +1

Query: 136 EKPKLKPCCACPETKRARDACIIENGEEN--CGPLIEEHKACMRKMGF 273
           EKPK  PCC C E K+ RD C++ NG+E+  C  LI ++K CM+  GF
Sbjct: 6   EKPK--PCCVCLEEKKKRDECLLFNGQESGKCNELIAQYKQCMKGFGF 51


>UniRef50_Q12287 Cluster: Cytochrome c oxidase copper chaperone;
           n=9; Ascomycota|Rep: Cytochrome c oxidase copper
           chaperone - Saccharomyces cerevisiae (Baker's yeast)
          Length = 69

 Score = 52.8 bits (121), Expect = 5e-06
 Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +1

Query: 145 KLKPCCACPETKRARDACIIENGE--ENCGPLIEEHKACMRKMGFNI 279
           K KPCC C   K  RD CI+ NG+  E C   IE++K CM+  GF +
Sbjct: 19  KPKPCCVCKPEKEERDTCILFNGQDSEKCKEFIEKYKECMKGYGFEV 65


>UniRef50_Q4H1E2 Cluster: Cytochrome c oxidase copper chaperone,
           putative; n=5; Trypanosomatidae|Rep: Cytochrome c
           oxidase copper chaperone, putative - Leishmania major
          Length = 84

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +1

Query: 70  MGN-ASAKAVEVKVLEGPAPENVEKPKLKPCCACPETKRARDACIIENGEENCGPLIEEH 246
           MGN AS+    V   +    ++ + P  K CCACP+ +R RD C +    + C   IE  
Sbjct: 1   MGNSASSVGGAVPPQQQDQRQSSKTPSCKICCACPQERRTRDECTLLRNVDECETEIEAF 60

Query: 247 KACMRKMGFN 276
            AC+R+ GF+
Sbjct: 61  YACLRREGFS 70


>UniRef50_A6SM14 Cluster: Cytochrome c oxidase copper chaperone
           protein; n=2; Sclerotiniaceae|Rep: Cytochrome c oxidase
           copper chaperone protein - Botryotinia fuckeliana B05.10
          Length = 95

 Score = 49.6 bits (113), Expect = 5e-05
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
 Frame = +1

Query: 82  SAKAVEVKVLEGPAPENVEKPKLKPCCACPETKRARDACII----ENGEENCGPLIEEHK 249
           SA +  + V   P  E   KPK  PCC C + K ARD C++    ++ +  C  ++E++K
Sbjct: 27  SATSANMGVDLKPTGEVSAKPK--PCCVCKDEKAARDECMLFSTAKDPQVACASMVEKYK 84

Query: 250 ACMRKMGFNI 279
           +CM   GFN+
Sbjct: 85  SCMAGFGFNL 94


>UniRef50_A5DUX2 Cluster: Predicted protein; n=1; Lodderomyces
           elongisporus NRRL YB-4239|Rep: Predicted protein -
           Lodderomyces elongisporus (Yeast) (Saccharomyces
           elongisporus)
          Length = 64

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
 Frame = +1

Query: 109 LEGPAPENVEKPKLKPCCACPETKRARDACIIENG--EENCGPLIEEHKACMRKMGF 273
           + G   +  E+ K KPCC C + +  RD C + +G  ++NC P +E + ACM+   F
Sbjct: 1   MAGQEQQKKEENKPKPCCVCIKEREERDKCALFHGVSDDNCKPQLEAYWACMKSYNF 57


>UniRef50_Q0TZC3 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 71

 Score = 47.2 bits (107), Expect = 3e-04
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = +1

Query: 145 KLKPCCACPETKRARDACII----ENGEENCGPLIEEHKACMRKMGFNI 279
           K+KPCC C E K  RD C++     + ++ C  L+ ++K CM   GF I
Sbjct: 23  KVKPCCVCTEQKAKRDECMLFSTSNDAQKECADLVGQYKQCMAGYGFKI 71


>UniRef50_Q70J60 Cluster: COX17 protein; n=6; Pezizomycotina|Rep:
           COX17 protein - Podospora anserina
          Length = 80

 Score = 44.8 bits (101), Expect = 0.001
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
 Frame = +1

Query: 79  ASAKAVEVKVLEGPAPENVEKPKLKPCCACPETKRARDACII----ENGEENCGPLIEEH 246
           AS+  V   + +  A    +KPK  PCC C + K  RD C++     + +++C   I+++
Sbjct: 12  ASSAPVAPVITQSAAAAAADKPK--PCCVCKDEKAKRDECMLFSKAADPQKDCLSTIDQY 69

Query: 247 KACMRKMGFNI 279
           ++CM   GF +
Sbjct: 70  RSCMAGFGFKV 80


>UniRef50_Q582X7 Cluster: Cytochrome c oxidase copper chaperone,
           putative; n=1; Trypanosoma brucei|Rep: Cytochrome c
           oxidase copper chaperone, putative - Trypanosoma brucei
          Length = 73

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 19/47 (40%), Positives = 25/47 (53%)
 Frame = +1

Query: 136 EKPKLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFN 276
           +KP  K CCACP  ++ARD C +  G E C   I     C+   GF+
Sbjct: 13  KKPACKICCACPAERQARDECTLLKGVEACQKEIGAFYKCLLHEGFS 59


>UniRef50_A0C955 Cluster: Chromosome undetermined scaffold_16, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_16,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 57

 Score = 37.5 bits (83), Expect = 0.21
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +1

Query: 109 LEGPAPENVEKPKLKPCCACPETKRARDACIIENGEENCGPLIEEHKACM 258
           ++   P+   K K   CC C   +R  + CI  NGEE C    +  K C+
Sbjct: 1   MDSEVPKKGCKCKNGACCKCAPVRRIMNQCIQNNGEEKCQTFRDSWKECI 50


>UniRef50_Q4T8R6 Cluster: Chromosome undetermined SCAF7739, whole
           genome shotgun sequence; n=2; Tetraodontidae|Rep:
           Chromosome undetermined SCAF7739, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 544

 Score = 34.3 bits (75), Expect = 2.0
 Identities = 22/66 (33%), Positives = 31/66 (46%)
 Frame = -1

Query: 269 PIFLIQALCSSISGPQFSSPFSIMHASRALFVSGQAQQGFSLGFSTFSGAGPSKTLTSTA 90
           PI  I      I   + +SP  I    ++L +S      FSL  S+ SGAGPS+  +S  
Sbjct: 377 PIMDIDEFDDEIQEEEVNSPHFITSHHQSLLLSHSNDYSFSLSPSSSSGAGPSQDTSSFT 436

Query: 89  LALAFP 72
            +L  P
Sbjct: 437 TSLIPP 442


>UniRef50_Q00VH9 Cluster: Chromosome 15 contig 1, DNA sequence; n=1;
           Ostreococcus tauri|Rep: Chromosome 15 contig 1, DNA
           sequence - Ostreococcus tauri
          Length = 126

 Score = 33.9 bits (74), Expect = 2.6
 Identities = 15/18 (83%), Positives = 15/18 (83%)
 Frame = +1

Query: 142 PKLKPCCACPETKRARDA 195
           PK K CCACPETK ARDA
Sbjct: 66  PK-KLCCACPETKAARDA 82


>UniRef50_A2R033 Cluster: Contig An12c0220, complete genome; n=1;
           Aspergillus niger|Rep: Contig An12c0220, complete genome
           - Aspergillus niger
          Length = 644

 Score = 33.5 bits (73), Expect = 3.4
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +1

Query: 130 NVEKPKL-KPCCACPETKRARDACIIENGEENCGPLIEEHKACM 258
           N   P+L K   AC E KR +  C I  G   C    E H +C+
Sbjct: 21  NASVPRLRKASTACRECKRTKARCQIREGTSECDRCTERHLSCV 64


>UniRef50_Q9U0W0 Cluster: Putative chaperone; n=5;
           Trypanosomatidae|Rep: Putative chaperone - Leishmania
           major
          Length = 113

 Score = 33.1 bits (72), Expect = 4.6
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +1

Query: 118 PAPENVEKPKLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRK 264
           P P + + P+L     CPET+ ARD C+ + G  +C   IE H  C+ +
Sbjct: 22  PLPCSDQHPRLP----CPETRWARDFCLAQGG--SCEYKIEAHFDCLEQ 64


>UniRef50_UPI00005459A3 Cluster: PREDICTED: hypothetical protein
           isoform 2; n=1; Danio rerio|Rep: PREDICTED: hypothetical
           protein isoform 2 - Danio rerio
          Length = 55

 Score = 32.3 bits (70), Expect = 8.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 163 ACPETKRARDACIIENGEENCGPLIEEHKACMR 261
           AC   K   D C+ E GE+ C  L+E   AC++
Sbjct: 17  ACVAIKADLDKCVKEKGEDGCKDLMEAFAACVK 49


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,282,543
Number of Sequences: 1657284
Number of extensions: 8451545
Number of successful extensions: 20926
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 20319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20910
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -