Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0807
         (560 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L77701-1|AAA98114.1|   63|Homo sapiens COX17 protein.                  93   6e-19
BC108317-1|AAI08318.1|   63|Homo sapiens COX17 cytochrome c oxid...    93   6e-19
BC105280-1|AAI05281.1|   63|Homo sapiens COX17 cytochrome c oxid...    93   6e-19
BC010933-1|AAH10933.1|   63|Homo sapiens COX17 cytochrome c oxid...    93   6e-19
AF269244-1|AAF82569.1|   63|Homo sapiens COX17 protein.                93   6e-19
AL138686-3|CAH71087.1|   63|Homo sapiens protein ( Human DNA seq...    91   2e-18
AL049693-2|CAB89564.1|  135|Homo sapiens protein ( Human DNA seq...    29   8.5  

>L77701-1|AAA98114.1|   63|Homo sapiens COX17 protein.
          Length = 63

 Score = 93.1 bits (221), Expect = 6e-19
 Identities = 39/52 (75%), Positives = 43/52 (82%)
 Frame = +1

Query: 124 PENVEKPKLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFNI 279
           PE+ EK  LKPCCACPETK+ARDACIIE GEE+CG LIE HK CMR +GF I
Sbjct: 12  PESQEKKPLKPCCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>BC108317-1|AAI08318.1|   63|Homo sapiens COX17 cytochrome c oxidase
           assembly homolog (S. cerevisiae) protein.
          Length = 63

 Score = 93.1 bits (221), Expect = 6e-19
 Identities = 39/52 (75%), Positives = 43/52 (82%)
 Frame = +1

Query: 124 PENVEKPKLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFNI 279
           PE+ EK  LKPCCACPETK+ARDACIIE GEE+CG LIE HK CMR +GF I
Sbjct: 12  PESQEKKPLKPCCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>BC105280-1|AAI05281.1|   63|Homo sapiens COX17 cytochrome c oxidase
           assembly homolog (S. cerevisiae) protein.
          Length = 63

 Score = 93.1 bits (221), Expect = 6e-19
 Identities = 39/52 (75%), Positives = 43/52 (82%)
 Frame = +1

Query: 124 PENVEKPKLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFNI 279
           PE+ EK  LKPCCACPETK+ARDACIIE GEE+CG LIE HK CMR +GF I
Sbjct: 12  PESQEKKPLKPCCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>BC010933-1|AAH10933.1|   63|Homo sapiens COX17 cytochrome c oxidase
           assembly homolog (S. cerevisiae) protein.
          Length = 63

 Score = 93.1 bits (221), Expect = 6e-19
 Identities = 39/52 (75%), Positives = 43/52 (82%)
 Frame = +1

Query: 124 PENVEKPKLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFNI 279
           PE+ EK  LKPCCACPETK+ARDACIIE GEE+CG LIE HK CMR +GF I
Sbjct: 12  PESQEKKPLKPCCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>AF269244-1|AAF82569.1|   63|Homo sapiens COX17 protein.
          Length = 63

 Score = 93.1 bits (221), Expect = 6e-19
 Identities = 39/52 (75%), Positives = 43/52 (82%)
 Frame = +1

Query: 124 PENVEKPKLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFNI 279
           PE+ EK  LKPCCACPETK+ARDACIIE GEE+CG LIE HK CMR +GF I
Sbjct: 12  PESQEKKPLKPCCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>AL138686-3|CAH71087.1|   63|Homo sapiens protein ( Human DNA
           sequence from clone RP11-189B4 on chromosome
           13q14.11-14.3Contains a protein phosphatase 1 regulatory
           (inhibitor) subunit 2  ).
          Length = 63

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 38/52 (73%), Positives = 42/52 (80%)
 Frame = +1

Query: 124 PENVEKPKLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFNI 279
           PE+ EK  LKPCC CPETK+ARDACIIE GEE+CG LIE HK CMR +GF I
Sbjct: 12  PESQEKRPLKPCCTCPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>AL049693-2|CAB89564.1|  135|Homo sapiens protein ( Human DNA
           sequence from clone RP4-753D5 on chromosome 6p12.1-12.3 
           Contains the 3' end of the TFAP2B gene for transcription
           factor AP-2 sium/caltranscription factor AP-2 beta
           (activating enhancer binding protein 2 beta)).
          Length = 135

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 398 WIINLFFFFHIGTDLLTNKQCCRRYFVANNTLIEN 294
           W+I   ++ H+G D  TNK  C+   +  +  + N
Sbjct: 14  WVIIEKYYMHLGNDFHTNKHMCKEIAIIPSKKLHN 48


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,553,740
Number of Sequences: 237096
Number of extensions: 1269248
Number of successful extensions: 6417
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6417
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)