Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0807
         (560 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2101|AAF48421.1|   88|Drosophila melanogaster CG9065-PA...    92   5e-19
AY119286-1|AAM51146.1|  466|Drosophila melanogaster SD27884p pro...    31   1.1  
AE014297-752|AAF54236.2|  642|Drosophila melanogaster CG9684-PA ...    31   1.1  
AE014297-3684|AAF56376.1| 2768|Drosophila melanogaster CG13648-P...    28   7.5  

>AE014298-2101|AAF48421.1|   88|Drosophila melanogaster CG9065-PA
           protein.
          Length = 88

 Score = 91.9 bits (218), Expect = 5e-19
 Identities = 39/48 (81%), Positives = 40/48 (83%)
 Frame = +1

Query: 136 EKPKLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFNI 279
           EKPK K CCACPETKRARDACI+ENGEENC  LIE HK CMR  GFNI
Sbjct: 41  EKPKCKACCACPETKRARDACIVENGEENCLALIEAHKKCMRDAGFNI 88


>AY119286-1|AAM51146.1|  466|Drosophila melanogaster SD27884p
           protein.
          Length = 466

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 25  NNKLNCIICEKTS*KMGNASAKAVEVKVLEGPAPENVEKPKLKPCCAC 168
           N +LN     K   +  N++A+ ++   LEGP P ++++P   P   C
Sbjct: 297 NEQLNAFFNSKKLLRNPNSAAENIKSCSLEGPQPSHIDQPIAIPAIEC 344


>AE014297-752|AAF54236.2|  642|Drosophila melanogaster CG9684-PA
           protein.
          Length = 642

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 25  NNKLNCIICEKTS*KMGNASAKAVEVKVLEGPAPENVEKPKLKPCCAC 168
           N +LN     K   +  N++A+ ++   LEGP P ++++P   P   C
Sbjct: 297 NEQLNAFFNSKKLLRNPNSAAENIKSCSLEGPQPSHIDQPIAIPAIEC 344


>AE014297-3684|AAF56376.1| 2768|Drosophila melanogaster CG13648-PA
           protein.
          Length = 2768

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 166 CPETKRARDACIIENGEENCGPLI 237
           CP TK     CI+E  E+ C P+I
Sbjct: 63  CPFTKPIGHDCIVEKREDQCCPII 86


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,260,358
Number of Sequences: 53049
Number of extensions: 389380
Number of successful extensions: 1043
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)