Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0807
         (560 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099919-12|AAC68797.1|   63|Caenorhabditis elegans Hypothetical...    89   2e-18
Z98877-10|CAB63406.1|  314|Caenorhabditis elegans Hypothetical p...    27   7.0  
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z75713-3|CAB54301.1|  419|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z75713-2|CAB00051.2|  422|Caenorhabditis elegans Hypothetical pr...    27   9.2  
X51321-1|CAA35704.1|  422|Caenorhabditis elegans hypothetical pr...    27   9.2  

>AF099919-12|AAC68797.1|   63|Caenorhabditis elegans Hypothetical
           protein F40G9.2 protein.
          Length = 63

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 38/45 (84%), Positives = 38/45 (84%)
 Frame = +1

Query: 145 KLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFNI 279
           KLK CCACPETKR RDACIIENGEE CG LIE HKACMR  GFNI
Sbjct: 19  KLKACCACPETKRVRDACIIENGEEKCGKLIEAHKACMRAAGFNI 63


>Z98877-10|CAB63406.1|  314|Caenorhabditis elegans Hypothetical
           protein Y69H2.9 protein.
          Length = 314

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
 Frame = +1

Query: 151 KPCCACPETKRARDACIIE-------NGEENCGPLIEEHKACMRK 264
           K   AC E+KRA +AC++E         E NC    E+H+ C+ K
Sbjct: 212 KSTIACSESKRAVNACVVEFFICYTMFTEANC---TEKHENCVSK 253


>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
            T01D3.7 protein.
          Length = 2882

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +1

Query: 70   MGNASAKAVEVKVLEGPAPENVEKPKLKPCCACPETKRARDACIIE 207
            +GN+  K +   + +G  P   +   + P C CP+ K      +IE
Sbjct: 1046 IGNSEPKPIHFTLYDGCEPSLCQGSCVGPLCICPQGKTGIFCDVIE 1091


>Z75713-3|CAB54301.1|  419|Caenorhabditis elegans Hypothetical
           protein T01G9.2b protein.
          Length = 419

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = +1

Query: 76  NASAKAVEVKVLEGPAPENVEKPKLKPCCACPETKRARDACIIENG 213
           N+  K  ++ +  GP P   E       C C + +  +   I ENG
Sbjct: 180 NSQPKLTKMSIYRGPNPSEPESVDTPFSCYCGQNRTRKVEAIWENG 225


>Z75713-2|CAB00051.2|  422|Caenorhabditis elegans Hypothetical
           protein T01G9.2a protein.
          Length = 422

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = +1

Query: 76  NASAKAVEVKVLEGPAPENVEKPKLKPCCACPETKRARDACIIENG 213
           N+  K  ++ +  GP P   E       C C + +  +   I ENG
Sbjct: 183 NSQPKLTKMSIYRGPNPSEPESVDTPFSCYCGQNRTRKVEAIWENG 228


>X51321-1|CAA35704.1|  422|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 422

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = +1

Query: 76  NASAKAVEVKVLEGPAPENVEKPKLKPCCACPETKRARDACIIENG 213
           N+  K  ++ +  GP P   E       C C + +  +   I ENG
Sbjct: 183 NSQPKLTKMSIYRGPNPSEPESVDTPFSCYCGQNRTRKVEAIWENG 228


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,452,800
Number of Sequences: 27780
Number of extensions: 219055
Number of successful extensions: 573
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)