Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0805
         (717 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   5.4  
AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    24   5.4  
AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.         23   9.5  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/52 (21%), Positives = 24/52 (46%)
 Frame = +1

Query: 235 HSYCDVRGEILGSSQDEHQRKHLPKVFSSIKKYIEGTAKLTDDANKAAKLTV 390
           H YC V+         ++ R++LP + +   ++I      ++   +AAK  +
Sbjct: 411 HCYCPVKFGRKADPNGDYIRRYLPVLKNFPTRFIHEPWNASESVQRAAKCLI 462


>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 247 DVRGEILGSSQDEHQRKHLPKVFSSIKKYIEGTAKL 354
           D   +ILG   D  +++  P V ++ KKY+ G   L
Sbjct: 82  DFWDDILGFDVDLAEQEFSPLVDATFKKYLAGNITL 117


>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 385 TVTFKFGEISRDGSVQILATDYNNYAIAYNCKYDD 489
           T+TFK G+         LATDY    +  +  + D
Sbjct: 53  TLTFKDGQTYTQAIAFTLATDYGTVRLMSSYNFTD 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,945
Number of Sequences: 2352
Number of extensions: 12559
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)