Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0803
(738 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0490 - 23411742-23412944,23413071-23413595,23413666-234137... 33 0.24
07_03_0672 + 20593277-20594026 33 0.31
06_03_1073 - 27373259-27373304,27373542-27373624,27373719-273743... 31 0.95
04_03_0054 - 10296278-10296727 31 0.95
12_02_1084 - 25928373-25928426,25928551-25928652,25928913-259290... 30 1.7
02_04_0642 + 24686792-24686913,24687027-24687090,24688282-246884... 30 1.7
02_02_0235 + 8114606-8114806,8116530-8116692,8116785-8116887,811... 30 1.7
06_03_0564 + 22218955-22219060,22219184-22219293,22222363-22223682 29 2.9
01_05_0801 + 25353708-25353914,25354307-25354429,25355035-253552... 29 2.9
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 29 2.9
01_01_0402 + 3046504-3046582,3047265-3047487,3047954-3048107,304... 29 2.9
05_01_0266 - 2040555-2040722,2041248-2041349,2041461-2041958,204... 29 5.1
04_03_1046 + 21974577-21975126,21975620-21975894,21976120-219762... 29 5.1
04_01_0097 - 998766-999383,999479-999861,1000021-1000398,1000486... 29 5.1
12_01_0612 - 5044639-5044858,5045010-5045167,5045440-5045684,504... 28 6.7
03_02_0628 + 9957385-9957888,9957985-9958111,9958541-9958608,995... 28 6.7
12_02_0778 + 23074463-23076411,23076859-23077072,23077824-230778... 28 8.9
10_08_0364 + 17217631-17217833,17218134-17218308,17218391-172184... 28 8.9
06_03_1493 - 30536442-30536615,30536729-30536921,30537026-305372... 28 8.9
04_04_1374 - 33028790-33028951,33029033-33029087,33029402-330294... 28 8.9
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 28 8.9
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 28 8.9
02_04_0375 - 22464814-22465577,22466930-22466950,22467036-22467213 28 8.9
>02_04_0490 -
23411742-23412944,23413071-23413595,23413666-23413747,
23413841-23414050,23414371-23414523,23415335-23415447,
23415476-23415622
Length = 810
Score = 33.1 bits (72), Expect = 0.24
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 127 HNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIKSN-QELRKREWDKFIDDMNFKCQ 303
H L +L+ +L L + ++D + K C K + N ELR+ +W+K +D+++ C
Sbjct: 537 HLMLTILTITNSLSLAL-QRKDQDIVNAMK-CVKSTRLNLDELRREKWEKVLDEVSDFCD 594
Query: 304 RIDNAFEEKEEELRDLYADLKHK 372
+ D + E+ D Y D K +
Sbjct: 595 KYDIV----KLEMEDTYIDPKKR 613
>07_03_0672 + 20593277-20594026
Length = 249
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 274 FIDDMNFKCQRIDNAFEEKEEELRDLYADLKHKLN 378
F+ + N KC R+ N + + + DLY DLK +N
Sbjct: 21 FMQNRNIKCSRLQNIQQSHPKAIMDLYLDLKVMVN 55
>06_03_1073 -
27373259-27373304,27373542-27373624,27373719-27374397,
27374493-27374563,27374635-27374727,27375855-27375928,
27376016-27376073,27376212-27376349
Length = 413
Score = 31.1 bits (67), Expect = 0.95
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = +1
Query: 397 MDLKGSLVDTNVRIYPTNGFLEYIKKIKDDKVPENILKLKNGSDYETKCNVKDFDY---F 567
+ L G+L +T ++ + + I+ DK+P N+L ++ +E+K + F+Y
Sbjct: 94 LKLCGTLFETPAELHNISYQINMESYIEHDKIPTNVLAVEATPAFESKSS-GGFEYGEDH 152
Query: 568 AKTVNLTNEDIELLRTIKKTISRDSAGES 654
T L ED E L +K G S
Sbjct: 153 ILTPQLNTEDTEHLPLVKSVYQSAIRGNS 181
>04_03_0054 - 10296278-10296727
Length = 149
Score = 31.1 bits (67), Expect = 0.95
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 220 CQKQIKSN-QELRKREWDKFIDDMNFKCQRIDNAFEEKEEELRDLYADLK---HKLNIAD 387
C K + N ELR+ +W+K +D+++ C + D + E+ D Y D K HK I +
Sbjct: 3 CVKSTRLNLDELRREKWEKVLDEVSDFCDKYDIV----KLEMEDTYIDPKKHRHKSGITN 58
>12_02_1084 -
25928373-25928426,25928551-25928652,25928913-25929039,
25929292-25930730,25931430-25931447
Length = 579
Score = 30.3 bits (65), Expect = 1.7
Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Frame = +1
Query: 115 RKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIKSNQELRKREWDKFIDDMNF 294
RK ++L L + ++Q L ELE +E+ ++ + +E+ ++ IDD N
Sbjct: 253 RKMAQHSLSEL-KLVKQVEKLSHELEDLKIESHIKDLLELSTLREVFDN-YENHIDDANQ 310
Query: 295 KCQRIDNAFEEKEEELRDLYADLKHKLNIADI*IMDLKGS-LVDTNVRIYPTNGFLEYIK 471
+ + EKEE+L +Y D + KL + ++ + GS L+ + ++ N + +
Sbjct: 311 EETFLRELLIEKEEQLSIMYED-RQKLKYENNQLVAIAGSTLMQHHEQVNLVNDLTNFRE 369
Query: 472 KIKDDKVPENILKLKNGSD------YET--KCNVKDFDYFAKTVNLTNEDIELLRTIKKT 627
K+ + ++ IL+ K+ S+ YE + NV + T NLT I L ++
Sbjct: 370 KVCEQEL--LILESKSESNSMKSSLYEALQQINVCKQEIHGLTDNLTAMSIALEEAKEQN 427
Query: 628 ISRDS 642
S D+
Sbjct: 428 ASLDA 432
>02_04_0642 +
24686792-24686913,24687027-24687090,24688282-24688401,
24688685-24688774,24688848-24688986,24689664-24689786,
24689884-24689942
Length = 238
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 145 LSEKLEQALNLCEELEKDY--LETQKVCQKQIKSNQ-ELRKREWDKFIDDMNFK 297
L +KLE A N EEL+K+ LE Q CQ+ + S+ EL K K D NF+
Sbjct: 126 LRKKLEDANNESEELQKELSSLERQAECQRNLDSSMAELLKVFESKAFQD-NFQ 178
>02_02_0235 +
8114606-8114806,8116530-8116692,8116785-8116887,
8118584-8118650,8119923-8120486
Length = 365
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +1
Query: 181 EELEKDYLETQKVCQKQIKSNQELRKREWDKFIDDMNFKCQRIDNAFEEKEEELRDL 351
EE +LE QKV + Q++ Q+ + E DK N +C KE E RD+
Sbjct: 60 EECPICFLEEQKVIEAQMRMRQQALQDEEDKMKRKQN-RCSSSRTITPTKEVEYRDI 115
>06_03_0564 + 22218955-22219060,22219184-22219293,22222363-22223682
Length = 511
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 391 KCQQYLICVLGQHTDLSILLLFPQKRY 311
KC YL CVL T L +LL+ P+K Y
Sbjct: 172 KCLFYLCCVLPVLTILCLLLVMPRKPY 198
>01_05_0801 + 25353708-25353914,25354307-25354429,25355035-25355205,
25355303-25355392,25355497-25355583,25355664-25355719,
25355812-25355905,25356032-25356144,25356211-25356283,
25356603-25356683,25356865-25356951,25357031-25357135,
25357279-25357385,25357481-25357541,25357931-25358158,
25359720-25360677,25360816-25360997,25361237-25361326,
25361422-25361709,25361844-25362056,25362560-25362784
Length = 1212
Score = 29.5 bits (63), Expect = 2.9
Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 7/169 (4%)
Frame = +1
Query: 55 KPI*NLKKITEIKDNESERIRKSGHNALPVLSEKLEQALNLC----EELEKDYLETQKVC 222
K + NL E+K+ + + + + L + + Q L EE+ K Q+
Sbjct: 834 KLVANLANQIEVKNRHLQELEVTYNERTTSLEKMMGQREQLLQKYNEEIRKMQQLAQRHS 893
Query: 223 QKQIKSNQELRKREWDKFIDDMNFKCQRIDNAFEEKEEELRDLYAD-LKHKLNIADI*IM 399
QK I NQ+LR E + + ++N + + +D + + + R + + K+ + + + +
Sbjct: 894 QKIIDENQKLRS-ELESKMSELNTRSKELDEIAAKSDYDRRIIDQEKQKNAIKSSHLKLA 952
Query: 400 DLKGSLVDTNVRIYPTNGFLEYIKKIKDDK--VPENILKLKNGSDYETK 540
L+ D NV L+ +++ K +K + ILKL+ D + K
Sbjct: 953 TLEQERADENV--------LKLVREHKREKEAAVKKILKLEQQVDAKQK 993
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 29.5 bits (63), Expect = 2.9
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 11/162 (6%)
Frame = +1
Query: 103 SERIRKSGHNALPVLSEKL---EQALNLCEE-LEKDYLETQKVCQKQIKSNQELRKREWD 270
S++ +K+ + + + KL E A++L E EK L+ Q +KQ QE D
Sbjct: 211 SQQEKKALESVVSSMESKLAENEAAISLMRENYEKRLLDQQTAQKKQAMKFQEQEASLLD 270
Query: 271 ------KFIDDMNFKCQRIDNAFEEKEEELRDLYADLKHKLNIADI*IMDLKGSLVDTNV 432
K + ++ + +R EE EE+R L + L + D+ LK L D N+
Sbjct: 271 QLSSTKKTVTSLSEEFRREKTLAEELREEIRRLESSLAQAGDDKDVLEAKLKEKLGDVNI 330
Query: 433 RIYPTNGFLEYIKKIKDDKVPE-NILKLKNGSDYETKCNVKD 555
+ + I K ++ E + L +DY C+ D
Sbjct: 331 LQEKVSLLSQEIDN-KGIRIRELSSLLSSKEADYRNLCSFSD 371
>01_01_0402 +
3046504-3046582,3047265-3047487,3047954-3048107,
3048253-3048355,3048554-3048738,3048972-3049051,
3049433-3049511,3050015-3050096,3050221-3050279,
3050379-3050684,3050825-3050989
Length = 504
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +1
Query: 106 ERIRKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIKSNQELRKREWDKFIDD 285
E ++ S N S + EQA+ + +E + + ++VC+ I + E E D +D+
Sbjct: 21 EALKSSVRNT--AASRRREQAIAIGKERREALIRAKRVCRAPISGSDEAEMEEGDMVVDE 78
>05_01_0266 -
2040555-2040722,2041248-2041349,2041461-2041958,
2042372-2042479,2042559-2042753
Length = 356
Score = 28.7 bits (61), Expect = 5.1
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +1
Query: 67 NLKKITEIKDNESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIKSNQ 246
NL K+ KD E R+R + + +LS N +ELE LE QK +++Q
Sbjct: 231 NLNKLLNAKDAEIARLR----DEIRILSAHWT---NKTKELESQ-LEKQK------RTDQ 276
Query: 247 ELRKR--EWDKFIDDMNFKCQRIDNAFEEKEEELRDL 351
EL+KR + + + + + +++ A E+++++L++L
Sbjct: 277 ELKKRILKLEFCLQESRSQIRKLQRAGEKRDKQLKEL 313
>04_03_1046 +
21974577-21975126,21975620-21975894,21976120-21976284,
21976352-21976441,21977723-21978097
Length = 484
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 151 EKLEQALNLCEELEKDYLETQKVCQKQIKSNQ-ELRKREWDKFIDDMNFKCQRIDNAFEE 327
EK EQ N E K + E++K ++Q K + E++K + ++++ EE
Sbjct: 409 EKAEQESNNAREENKRFRESEKASKEQEKQTEAEIQKLK------------EKMEKDREE 456
Query: 328 KEEELRDLYADLK 366
+EEE+R L DL+
Sbjct: 457 REEEIRRLRDDLE 469
>04_01_0097 -
998766-999383,999479-999861,1000021-1000398,
1000486-1000711,1000799-1001323,1003032-1003164,
1004353-1004435,1004645-1005349,1005483-1005556,
1006290-1006392,1006485-1006727
Length = 1156
Score = 28.7 bits (61), Expect = 5.1
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Frame = +1
Query: 67 NLKKITEI-KDNESERIRKSGHNA---LPVLSEKLEQALNLCEELEKDYLETQKVCQKQI 234
NL+++ + K NE R++ +A + +L +KL++ L+L +E KD LE + Q+
Sbjct: 234 NLEELQDQNKGNEIGRLQAEAVDAKMNISILEDKLQEMLSLVKE--KD-LEIE-----QL 285
Query: 235 KSNQELRKREWDKFIDDMNFKCQRIDNAFEEKEEELR 345
K Q + + K I+ N KC+ D +K L+
Sbjct: 286 KHGQPMTSQINKKDINQKNRKCRSQDPPSRDKSTNLQ 322
>12_01_0612 -
5044639-5044858,5045010-5045167,5045440-5045684,
5046006-5046294,5047540-5048561,5049320-5049389
Length = 667
Score = 28.3 bits (60), Expect = 6.7
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Frame = +1
Query: 70 LKKITEIKDNESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIKSNQE 249
L+K TE K+NE ER+ + A + + + C+ E+ + Q++ Q+K +E
Sbjct: 557 LRKDTEEKENEFERLLQE-ELARAIECDVDSETTENCKLREE---QIQRIIDCQVKDAEE 612
Query: 250 LRKREWDKFIDDMNFKCQRIDNAFEEKEEEL-RDLYADL-----KHKLNI 381
E D+ I K + + K+ EL +LYA L KHK +I
Sbjct: 613 F-DAEQDELIKTHEEKKANVKMEYMAKDVELEEELYAALTSLMEKHKPDI 661
>03_02_0628 +
9957385-9957888,9957985-9958111,9958541-9958608,
9958695-9958772,9958885-9958949,9959130-9959196,
9959344-9959526,9959690-9959746,9959857-9959952,
9960061-9960219
Length = 467
Score = 28.3 bits (60), Expect = 6.7
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Frame = +1
Query: 145 LSEKLEQALNLCEELEKDYLETQKVCQKQIKSNQELRKREWDKF---IDDMNFKCQRIDN 315
+ EKLE +LC E ++ ++ C++ Q +R DKF I D++ K N
Sbjct: 214 VKEKLE---SLCREFQRQNKMLKEECRRVSTEGQNMRMELSDKFNNAIKDVSVKLDEQKN 270
Query: 316 ---AFEEKEEELRDLYADLKHKLNI 381
A E+ LR DL + NI
Sbjct: 271 ECIAQLEENNLLRSKLKDLADQYNI 295
>12_02_0778 +
23074463-23076411,23076859-23077072,23077824-23077887,
23077930-23078008,23078181-23078303,23078805-23078919
Length = 847
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 151 EKLEQALNLCEELEKDYLETQKVC 222
EK E+AL LCE+++ ++ +VC
Sbjct: 398 EKYEEALKLCEKMKSMRIQLDRVC 421
>10_08_0364 +
17217631-17217833,17218134-17218308,17218391-17218474,
17218561-17218802,17218883-17219108,17219246-17219325,
17219408-17219492,17219665-17219796,17219927-17220040,
17220123-17220170,17220413-17220497,17220722-17220834
Length = 528
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/104 (21%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Frame = +1
Query: 193 KDYLETQKVCQKQIKSNQELRKREW--DKFIDDMNFKCQRIDNAFEEKEEELRDLYADLK 366
K Y+E K ++Q+K+ Q+ ++R +K + D N + N ++ E++ + +
Sbjct: 48 KQYIE--KHYKEQMKNLQDRKERRCSLEKKLADANVSEEEQHNIVKQFEKKETEYMRMQR 105
Query: 367 HKLNIADI*IMDL--KGSLVDTNVRIYPTNGFLEYIKKIKDDKV 492
HK+++ D ++ + KG+ + V G + +KK++ ++
Sbjct: 106 HKMSVDDFDLLTMIGKGAFGEVRVCREKNTGNVYAMKKLRKSEM 149
>06_03_1493 -
30536442-30536615,30536729-30536921,30537026-30537261,
30537859-30538031,30538860-30538910,30539020-30539455
Length = 420
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 175 LCEELEKDYLETQKVCQKQIKSNQELRKREWDKFIDDMNFKCQRIDNA 318
L + L +D Q VC + +N+E +KR W + + + C +D A
Sbjct: 15 LSDALARDAAAVQHVCSSYLPNNKE-KKRRW--ILCSLKYACLGVDPA 59
>04_04_1374 -
33028790-33028951,33029033-33029087,33029402-33029466,
33029558-33029701,33029825-33029878,33029971-33030220,
33030340-33030446,33031206-33031216,33032682-33032796,
33032897-33033005,33033088-33033203,33033288-33033647
Length = 515
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/118 (20%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Frame = +1
Query: 76 KITEIKDNESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQ--KQIKSNQE 249
+++E K + + I + A+ S++++Q ++E LE +K+ +++ NQ+
Sbjct: 379 RLSEAKKEKEQHISDAVDKAVNDKSKEIQQ------KIENAMLEKKKLADMNEKLTKNQD 432
Query: 250 LRKREWDKFIDDMNFKCQRIDNAFEEKEEELRDLYADLKHKLNI-ADI*IMDLKGSLV 420
+ +R + + + + D+ + EE+++D +K + +I + DLKG L+
Sbjct: 433 IWRRTLKEIEERERAQLKLKDDTIRDLEEQIKDFKFSIKLQKSIEKNKNADDLKGGLL 490
>03_05_0432 -
24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 268 DKFIDDMNFKCQRIDNAFEEKEEELRDLYADLKHKLNIA 384
+K +MN + ++ + ++K EEL + A+L+ KLNI+
Sbjct: 222 EKANQEMNLELNKLKHMLKQKHEELNEKQAELE-KLNIS 259
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = +1
Query: 184 ELEKDYLETQKVCQKQIKSNQELRKREWDKFIDDMNFKCQRIDNAFEEKEEELRD 348
E EK Y E ++ + QE R+WDK + + + + + ++EE +
Sbjct: 195 EKEKLYFENERKAGEDRIKRQEDSLRDWDKKLKESQNRILDLQRSLNDREERANE 249
>02_04_0375 - 22464814-22465577,22466930-22466950,22467036-22467213
Length = 320
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +1
Query: 322 EEKEEELRDLYADLKHKLNIADI*IMDLKGSLVDTNVRIYPTNGFLEYIKKIKDD 486
+E E++ ADLK+ LNI + +L+ L N ++ + +++++KI D
Sbjct: 160 DEMIMEMQAQIADLKNSLNIQETHSTNLQSQLDSANRDLFESEREIQHLRKIIAD 214
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,244,400
Number of Sequences: 37544
Number of extensions: 243668
Number of successful extensions: 822
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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