Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0803
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    29   0.20 
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    25   2.4  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   3.2  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            24   5.6  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
 Frame = +1

Query: 205 ETQKVCQKQIKSNQEL-----RKREWDKFIDDMNFKCQRIDNAFEEKEEELRDLYADLKH 369
           E +++ + QI   QEL     RK E D+ + +   +  ++     +KE+E+R++ A++  
Sbjct: 244 EAKRLKEDQISKQQELNIIEKRKEEADEVLKEKKKEVGKMTREMAKKEQEIREVEAEMSK 303

Query: 370 K 372
           +
Sbjct: 304 R 304


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 325 EKEEELRDLYADLKHKLNIADI*IMDLKGSLVDTNVRIYP 444
           E  E +RD+ A   +KL+   +  M+  G +V+  +R+YP
Sbjct: 329 EGRECVRDVLAKHDNKLSYDAVMEMEYLGWIVNETLRLYP 368


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 142 VLSEKLEQALNLCEELEKDYLETQKVCQ 225
           V+ E++E  L    +  + Y+E QKVC+
Sbjct: 198 VIREEIEPKLEKLRKEREHYIEFQKVCR 225



 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 304 RIDNAFEEKEEELRDLYADL 363
           RI    +EKE ELRD+ A++
Sbjct: 681 RIQAMLQEKEAELRDISAEV 700


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 27/100 (27%), Positives = 44/100 (44%)
 Frame = +1

Query: 85  EIKDNESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIKSNQELRKRE 264
           +++DN   R+  +  +ALP L   LE + N  EEL+   L      +     + +LR   
Sbjct: 189 DMRDNIF-RLPATIFDALPKL-RVLELSFNSLEELDPRLLRHLPNLRLLTLWHNKLRTLS 246

Query: 265 WDKFIDDMNFKCQRIDNAFEEKEEELRDLYADLKHKLNIA 384
              F        +R+D +  + E    DL+ADL H   +A
Sbjct: 247 RAAFAGVPEL--ERLDLSSNQLESVPGDLFADLPHLTELA 284


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,075
Number of Sequences: 2352
Number of extensions: 11186
Number of successful extensions: 67
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)