Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0803
(738 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g52280.1 68418.m06488 protein transport protein-related low s... 32 0.35
At5g41140.1 68418.m05001 expressed protein 32 0.46
At5g58320.2 68418.m07301 kinase interacting protein-related low ... 31 0.80
At5g58320.1 68418.m07300 kinase interacting protein-related low ... 31 0.80
At4g34580.1 68417.m04913 SEC14 cytosolic factor, putative / phos... 31 1.1
At4g01780.1 68417.m00233 XH/XS domain-containing protein contain... 31 1.1
At2g20470.1 68415.m02390 protein kinase, putative contains prote... 31 1.1
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 30 1.4
At4g08430.1 68417.m01392 Ulp1 protease family protein similar to... 30 1.8
At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zi... 30 1.8
At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zi... 30 1.8
At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:... 30 1.8
At1g59540.1 68414.m06694 kinesin motor protein-related similar t... 29 2.4
At3g12810.1 68416.m01598 SNF2 domain-containing protein / helica... 29 3.2
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 29 3.2
At5g39050.1 68418.m04725 transferase family protein similar to a... 29 4.3
At2g46180.1 68415.m05742 intracellular protein transport protein... 29 4.3
At5g17900.1 68418.m02099 expressed protein 28 5.6
At3g22790.1 68416.m02873 kinase interacting family protein simil... 28 5.6
At1g29940.1 68414.m03658 DNA-directed RNA polymerase family prot... 28 5.6
At4g08580.1 68417.m01410 microfibrillar-associated protein-relat... 28 7.4
At3g20320.2 68416.m02575 mce-related family protein contains Pfa... 28 7.4
At3g20320.1 68416.m02574 mce-related family protein contains Pfa... 28 7.4
At2g20970.1 68415.m02481 hypothetical protein 28 7.4
At2g17580.1 68415.m02034 polynucleotide adenylyltransferase fami... 28 7.4
At5g18230.1 68418.m02139 transcription regulator NOT2/NOT3/NOT5 ... 27 9.8
At4g32070.1 68417.m04564 octicosapeptide/Phox/Bem1p (PB1) domain... 27 9.8
At3g47890.1 68416.m05222 ubiquitin carboxyl-terminal hydrolase-r... 27 9.8
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +1
Query: 145 LSEKLE-QALNLCEELEKDYLETQKVCQKQIKSNQELRKREWDKFI--DDMNFKCQRIDN 315
L ++LE QA E+++ E + Q+ IK+ + LRK W+ I + + KC+R+
Sbjct: 533 LKKELEDQAQAYDEDIDTMMREKTEQEQRAIKAEENLRKTRWNNAITAERLQEKCKRLSL 592
Query: 316 AFEEKEEELRDL 351
E K E +L
Sbjct: 593 EMESKLSEHENL 604
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/89 (22%), Positives = 43/89 (48%)
Frame = +1
Query: 160 EQALNLCEELEKDYLETQKVCQKQIKSNQELRKREWDKFIDDMNFKCQRIDNAFEEKEEE 339
E + N+ EE+ +D L C+K + SN +L+ + + ++ + ++ E+K E
Sbjct: 345 EDSSNMIEEI-RDELS----CEKDLTSNLKLQLQRTQESNSNLILAVRDLNEMLEQKNNE 399
Query: 340 LRDLYADLKHKLNIADI*IMDLKGSLVDT 426
+ L + L+ + + MD + +DT
Sbjct: 400 ISSLNSLLEEAKKLEEHKGMDSGNNEIDT 428
>At5g41140.1 68418.m05001 expressed protein
Length = 983
Score = 31.9 bits (69), Expect = 0.46
Identities = 27/107 (25%), Positives = 48/107 (44%)
Frame = +1
Query: 58 PI*NLKKITEIKDNESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIK 237
P NLK ++E E +RK L +K E+ N LE + + + +
Sbjct: 789 PCDNLKHSLSNNESEIENLRKQVVQVRSELEKKEEEMAN----LENREASADNITKTEQR 844
Query: 238 SNQELRKREWDKFIDDMNFKCQRIDNAFEEKEEELRDLYADLKHKLN 378
SN++ R ++ + I + F EKE++L++ +L+ KLN
Sbjct: 845 SNED-RIKQLEGQIKLKENALEASSKIFIEKEKDLKNRIEELQTKLN 890
>At5g58320.2 68418.m07301 kinase interacting protein-related low
similarity to kinase interacting protein 1 [Petunia
integrifolia] GI:13936326
Length = 558
Score = 31.1 bits (67), Expect = 0.80
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 3/184 (1%)
Frame = +1
Query: 88 IKDNESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIKSNQELRKREW 267
+ D +SE + + LSE+L E EK +K +K + +L+ +
Sbjct: 282 LDDEQSEGAASTQELDIETLSEELRITSLRLREAEKQNGIMRKEVEKSKSDDAKLKSLQ- 340
Query: 268 DKFIDDMNFKCQRIDNAFEEKEE--ELRDLYADLKHKLNIADI*IMDLKGSLVDTNVRIY 441
D A +K E +L D + LK L D I DLK +L D +I+
Sbjct: 341 DMLESAQKEAAAWKSKASADKREVVKLLDRISMLKSSLAGRDHEIRDLKTALSDAEEKIF 400
Query: 442 PTNGFLEY-IKKIKDDKVPENILKLKNGSDYETKCNVKDFDYFAKTVNLTNEDIELLRTI 618
P ++ I K+ ++K+ ++ E + NV+ + + VN NE IE +
Sbjct: 401 PEKAQVKADIAKLLEEKIH------RDDQFKELEANVRYLEDERRKVN--NEKIEEEEKL 452
Query: 619 KKTI 630
K I
Sbjct: 453 KSEI 456
>At5g58320.1 68418.m07300 kinase interacting protein-related low
similarity to kinase interacting protein 1 [Petunia
integrifolia] GI:13936326
Length = 490
Score = 31.1 bits (67), Expect = 0.80
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 3/184 (1%)
Frame = +1
Query: 88 IKDNESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIKSNQELRKREW 267
+ D +SE + + LSE+L E EK +K +K + +L+ +
Sbjct: 282 LDDEQSEGAASTQELDIETLSEELRITSLRLREAEKQNGIMRKEVEKSKSDDAKLKSLQ- 340
Query: 268 DKFIDDMNFKCQRIDNAFEEKEE--ELRDLYADLKHKLNIADI*IMDLKGSLVDTNVRIY 441
D A +K E +L D + LK L D I DLK +L D +I+
Sbjct: 341 DMLESAQKEAAAWKSKASADKREVVKLLDRISMLKSSLAGRDHEIRDLKTALSDAEEKIF 400
Query: 442 PTNGFLEY-IKKIKDDKVPENILKLKNGSDYETKCNVKDFDYFAKTVNLTNEDIELLRTI 618
P ++ I K+ ++K+ ++ E + NV+ + + VN NE IE +
Sbjct: 401 PEKAQVKADIAKLLEEKIH------RDDQFKELEANVRYLEDERRKVN--NEKIEEEEKL 452
Query: 619 KKTI 630
K I
Sbjct: 453 KSEI 456
>At4g34580.1 68417.m04913 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative similar to
phosphatidylinositol transfer-like protein III
(GI:14486705) [Lotus japonicus]; similar to
phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus]; similar SEC14 protein,
Saccharomyces cerevisiae, PIR2:A30106; contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus
Length = 560
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +1
Query: 70 LKKITEIKDNESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIKSNQE 249
+K++ E++D K H EKL+ ALN + LE++ ET+K ++ + S +E
Sbjct: 477 VKRMAELEDKCMFLDLKPAH-VESEKEEKLQAALNRVQVLEQELTETKKALEEALVSQKE 535
Query: 250 L 252
+
Sbjct: 536 I 536
>At4g01780.1 68417.m00233 XH/XS domain-containing protein contains
Pfam profiles PF03469: XH domain, PF03468: XS domain
Length = 456
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/85 (25%), Positives = 46/85 (54%), Gaps = 12/85 (14%)
Frame = +1
Query: 145 LSEKLEQALNLCEEL-EKDYLET--QKVCQKQIKSNQELRKREWDKFIDDMN---FKCQR 306
L E ++ +N EL K +++ QK CQ+ ++ + W+ +I+D + +K +
Sbjct: 311 LQEARKELVNCMGELVRKPFVDAMQQKYCQEDVEDRAVEVLQLWEHYINDPDWHPYKRVK 370
Query: 307 IDN------AFEEKEEELRDLYADL 363
++N ++++E+LR+L ADL
Sbjct: 371 LENQDREVEVIDDRDEKLRELKADL 395
>At2g20470.1 68415.m02390 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 596
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = +1
Query: 187 LEKDYLETQKVCQ--KQIKSNQELRKREWDKFIDDMNFKCQRIDNAFEEKEEELRDLYAD 360
+E Y E K+ Q K+ +S E + + D +D N + E+KE E L
Sbjct: 62 IENHYKEQMKILQERKERRSMLEQKLADADVSEEDQN----NLLKFLEKKETEYMRLQ-- 115
Query: 361 LKHKLNIADI*IMDL--KGSLVDTNVRIYPTNGFLEYIKKIK 480
+HKL +AD ++ + KG+ + V T G + +KK+K
Sbjct: 116 -RHKLGVADFDLLTMIGKGAFGEVRVCREKTTGQVYAMKKLK 156
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +1
Query: 151 EKLEQALNLCEELEKDYLETQKVCQKQIKSNQELRKREWDKFIDDMNFKCQRIDNAFEEK 330
EK+ QA LEK L + K + ++ E + E K + + +C+ ++ EE+
Sbjct: 457 EKIIQAEEKRLSLEKQQLLSDKESLEDLQQEIEKIRAEMTKKEEMIEEECKSLEIKKEER 516
Query: 331 EEELRDLYADLKHKL 375
EE LR L ++LK ++
Sbjct: 517 EEYLR-LQSELKSQI 530
>At4g08430.1 68417.m01392 Ulp1 protease family protein similar to
At5g45570, At5g28235; contains Pfam profile PF02902:
Ulp1 protease family, C-terminal catalytic domain
Length = 808
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Frame = +1
Query: 115 RKSGHNALPVLS-EKLEQALNLCEELEKDYLETQKVCQKQIKSNQELRKREWDKFI---- 279
RK+ +P+L ++ N +EK+ +V + + K NQE + + +
Sbjct: 166 RKTTLTGVPLLDWRSSKKRFNFTAFIEKEKAAHGQVSRHKRKQNQESSNEDGESKVMEST 225
Query: 280 --DDMNFKCQRIDNAFEEKEEELRDLYADLKHKLNIADI*IMDL 405
DD++ K QR A + +EE + D+++ L ++ I D+
Sbjct: 226 PADDVSHKKQRTGKAHIKVDEEEKTSLLDIRNMLEKMNVTISDM 269
>At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 29.9 bits (64), Expect = 1.8
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +1
Query: 73 KKITEIKDNESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIKSNQEL 252
+K EIK NE + LSE LEQ + LE +E QK ++ K ++
Sbjct: 343 RKKLEIKCNELAKREVHNGTERMKLSEDLEQNASKNSSLELAAMEQQKADEEVKKLAEDQ 402
Query: 253 RKREWDKFIDDMNFKCQRID-NAFEEKEEELRDLYADLKHKLNIAD 387
R+++ + + + QR A E + E+L+ +KH + D
Sbjct: 403 RRQKEELHEKIIRLERQRDQKQAIELEVEQLKGQLNVMKHMASDGD 448
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 9/60 (15%)
Frame = +1
Query: 211 QKVCQKQIKSNQELRKREWDKFIDDMN---FKCQRIDN------AFEEKEEELRDLYADL 363
QK CQ+ ++ + W+ ++ D + FK +++N ++++E+LR+L ADL
Sbjct: 527 QKYCQQDVEDRAVEVLQLWEHYLKDSDWHPFKRVKLENEDREVEVIDDRDEKLRELKADL 586
>At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 29.9 bits (64), Expect = 1.8
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +1
Query: 73 KKITEIKDNESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIKSNQEL 252
+K EIK NE + LSE LEQ + LE +E QK ++ K ++
Sbjct: 343 RKKLEIKCNELAKREVHNGTERMKLSEDLEQNASKNSSLELAAMEQQKADEEVKKLAEDQ 402
Query: 253 RKREWDKFIDDMNFKCQRID-NAFEEKEEELRDLYADLKHKLNIAD 387
R+++ + + + QR A E + E+L+ +KH + D
Sbjct: 403 RRQKEELHEKIIRLERQRDQKQAIELEVEQLKGQLNVMKHMASDGD 448
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 9/60 (15%)
Frame = +1
Query: 211 QKVCQKQIKSNQELRKREWDKFIDDMN---FKCQRIDN------AFEEKEEELRDLYADL 363
QK CQ+ ++ + W+ ++ D + FK +++N ++++E+LR+L ADL
Sbjct: 527 QKYCQQDVEDRAVEVLQLWEHYLKDSDWHPFKRVKLENEDREVEVIDDRDEKLRELKADL 586
>At2g33240.1 68415.m04072 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin my5A
(SP:Q02440) {Gallus gallus}
Length = 1770
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +1
Query: 151 EKLEQALNLCEELEKDYLETQKVCQKQIKSNQELRKREWDKFIDDMNFKCQRIDNAFEEK 330
+K E+A LCEE K ++T+K ++ + +E K+ + D K + + +
Sbjct: 1171 KKYEEASKLCEERLKQVVDTEKKYEEASRLCEERLKQ-----VVDTETKLIELKTSMQRL 1225
Query: 331 EEELRDLYADLK 366
EE++ D+ A+ K
Sbjct: 1226 EEKVSDMEAEDK 1237
>At1g59540.1 68414.m06694 kinesin motor protein-related similar to
kinesin motor protein (kin2) GI:2062751 from (Ustilago
maydis)
Length = 823
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 136 LPVLSEKL-EQALNLCEELEKDYLETQKVCQKQIKSNQELRKREWDKFIDDMNFKCQRID 312
L ++ E+ E LC L+K LE + +++ + K E D ++ QR+
Sbjct: 703 LIIIKERYNELEKELC--LDKQLLEASRESHEKLIKEVQFLKEERDSLDRKISQSTQRLR 760
Query: 313 NAFEEKEEELRDLYADLKHKLNIAD 387
+KE L+DL ++K + ++ +
Sbjct: 761 VIASDKENALKDLNVEVKRRKDMEE 785
>At3g12810.1 68416.m01598 SNF2 domain-containing protein / helicase
domain-containing protein similar to transcriptional
activator SRCAP [Homo sapiens] GI:5106572; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain
Length = 2055
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +1
Query: 97 NESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIKSNQELRKREWDKF 276
+E E + G + +P+ + +E AL E+ E DY+ ++V Q++ NQE + ++
Sbjct: 1252 DEKETSKHCGAD-IPLSNADVEAALKQAED-EADYMALKRVEQEEAVDNQEFTEEPVERP 1309
Query: 277 IDD 285
DD
Sbjct: 1310 EDD 1312
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/78 (28%), Positives = 31/78 (39%)
Frame = +1
Query: 133 ALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIKSNQELRKREWDKFIDDMNFKCQRID 312
A V S LE ALN+ E EK+ E + K E E+ I + + I
Sbjct: 122 AFQVKSSSLEAALNIATENEKELTENLNAVTSE-KKKLEATVDEYSVKISESENLLESIR 180
Query: 313 NAFEEKEEELRDLYADLK 366
N + +L + DLK
Sbjct: 181 NELNVTQGKLESIENDLK 198
>At5g39050.1 68418.m04725 transferase family protein similar to
anthocyanin 5-aromatic acyltransferase from Gentiana
triflora GI:4185599, malonyl CoA:anthocyanin
5-O-glucoside-6'''-O-malonyltransferase from Perilla
frutescens GI:17980232, Salvia splendens GI:17980234;
contains Pfam profile PF02458 transferase family
Length = 348
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 559 DYFAKTVNLTNEDIELLR-TIKKTISRDSAGES 654
D F T+NLT EDI+ LR +KK S S S
Sbjct: 252 DVFRYTLNLTREDIQKLRERLKKESSSSSVSSS 284
>At2g46180.1 68415.m05742 intracellular protein transport protein
USO1-related similar to Intracellular protein transport
protein USO1 (Swiss-Prot:P25386) [Saccharomyces
cerevisiae]
Length = 725
Score = 28.7 bits (61), Expect = 4.3
Identities = 25/95 (26%), Positives = 43/95 (45%)
Frame = +1
Query: 79 ITEIKDNESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIKSNQELRK 258
+ E + ESE++ + + L + E + LEK +T Q++IKS+ +L
Sbjct: 381 LLEKETEESEKMDEDSR-LIDELRQTNEYQRSQILGLEKALRQTM-ANQEEIKSSSDLEI 438
Query: 259 REWDKFIDDMNFKCQRIDNAFEEKEEELRDLYADL 363
R+ I+D+N K + K EL +L L
Sbjct: 439 RKSKGIIEDLNQKLANCLRTIDSKNVELLNLQTAL 473
>At5g17900.1 68418.m02099 expressed protein
Length = 435
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = +1
Query: 100 ESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIKSNQELRKREWDKFI 279
++ER + L E LE+ +LE+ LET+++ ++++ ++E+RK + +
Sbjct: 188 KAERDTIAERERLEAEEEALEELAK--RKLEQRKLETKQIVVEEVRKDEEIRK---NILL 242
Query: 280 DDMNFKCQRIDNAFEEKEE 336
++ N D+ E EE
Sbjct: 243 EEANIGDVETDDELNEAEE 261
>At3g22790.1 68416.m02873 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 28.3 bits (60), Expect = 5.6
Identities = 25/89 (28%), Positives = 42/89 (47%)
Frame = +1
Query: 100 ESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIKSNQELRKREWDKFI 279
E+E + K+ HNA L E + EEL KD E++K +K N E R E
Sbjct: 1171 EAEEMLKATHNANAELCEAV-------EELRKDCKESRK-----LKGNLEKRNSELCDLA 1218
Query: 280 DDMNFKCQRIDNAFEEKEEELRDLYADLK 366
+ + + + N E E E++ L+ +++
Sbjct: 1219 GRQDEEIKILSNLKENLESEVKLLHKEIQ 1247
>At1g29940.1 68414.m03658 DNA-directed RNA polymerase family protein
similar to SP|P22138 DNA-directed RNA polymerase I 135
kDa polypeptide (EC 2.7.7.6) (RNA polymerase I subunit
2) {Saccharomyces cerevisiae}; contains Pfam profiles
PF04563; RNA polymerase beta subunit, PF04560: RNA
polymerase Rpb2 domain 7, PF04561: RNA polymerase Rpb2
domain 2, PF04565: RNA polymerase Rpb2 domain 3,
PF00562: RNA polymerase Rpb2 domain 6
Length = 1114
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +1
Query: 82 TEIKDN----ESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLE 207
T + DN +++ I GH L EKLE+ L C+ L KD L+
Sbjct: 299 TSLPDNPDSLQNQEILVPGHVITIYLKEKLEEWLRKCKSLLKDELD 344
>At4g08580.1 68417.m01410 microfibrillar-associated protein-related
similar to Microfibrillar-associated protein 1
(Associated microfibril protein) (AMF)
(Swiss-Prot:P55080) [Gallus gallus]
Length = 435
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 151 EKLEQALNLCEELEKDYLETQKVCQKQIKSNQELRKREWDK---FIDDMNFKCQRIDNAF 321
E+LE EEL K LE +K+ KQI +E+RK E + +++ N D+
Sbjct: 198 ERLEAEEEALEELAKRKLEQRKIETKQIVV-EEVRKDEEIRKNILLEEANIGDVETDDEL 256
Query: 322 EEKEE 336
E EE
Sbjct: 257 NEAEE 261
>At3g20320.2 68416.m02575 mce-related family protein contains Pfam
PF02470: mce related protein
Length = 282
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 358 DLKHKLNIADI*IMDLKGSLVDTNVRIYPTNGFLEYIKKIKDDK--VPENILKLKNGS 525
+L H I + ++G V T +R+ P+ +E + +I+DDK +P N L N S
Sbjct: 134 ELSHASGICTGTPVRIRGVTVGTIIRVNPSLKNIEAVAEIEDDKIIIPRNSLVEVNQS 191
>At3g20320.1 68416.m02574 mce-related family protein contains Pfam
PF02470: mce related protein
Length = 381
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 358 DLKHKLNIADI*IMDLKGSLVDTNVRIYPTNGFLEYIKKIKDDK--VPENILKLKNGS 525
+L H I + ++G V T +R+ P+ +E + +I+DDK +P N L N S
Sbjct: 134 ELSHASGICTGTPVRIRGVTVGTIIRVNPSLKNIEAVAEIEDDKIIIPRNSLVEVNQS 191
>At2g20970.1 68415.m02481 hypothetical protein
Length = 373
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +1
Query: 154 KLEQALNLCEELEKDYLETQKVCQKQIKSNQELRKREWDKFIDDMN 291
++ + + +EL +D + V Q I S E +++EW +F+D+++
Sbjct: 169 EVREQVEKMKELVEDGKKRVTVMQNIIHSVLETQRKEWGEFLDELS 214
>At2g17580.1 68415.m02034 polynucleotide adenylyltransferase family
protein similar to SP|P13685 Poly(A) polymerase (EC
2.7.7.19) {Escherichia coli O157:H7}; contains Pfam
profile PF01743: polyA polymerase family protein
Length = 757
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +1
Query: 58 PI*NLKKITEIKDNESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIK 237
PI L K K N S+ RK HN LPV K + + ++ D L+ + +Q+
Sbjct: 675 PICELPKQKTSK-NHSKESRKVKHNDLPVKEIKEAKQGFVSDKSMSDLLQVLEKSSQQVS 733
Query: 238 SNQE 249
S +E
Sbjct: 734 SKEE 737
>At5g18230.1 68418.m02139 transcription regulator NOT2/NOT3/NOT5
family protein contains Pfam domain PF04153: NOT2 / NOT3
/ NOT5 family
Length = 843
Score = 27.5 bits (58), Expect = 9.8
Identities = 38/175 (21%), Positives = 78/175 (44%), Gaps = 8/175 (4%)
Frame = +1
Query: 70 LKKITEIKDNESERIRKSGHNALPVLSEKLEQALNLCEELEKDYLETQKVCQKQIKSNQE 249
+KK+ +D I+ S V S EQ+L +L + +E K+C+K+ K+
Sbjct: 52 IKKLQRYRDQIKTWIQSSEIKDKKV-SASYEQSLVDARKLIEKEMERFKICEKETKTKAF 110
Query: 250 LRKREWDKFIDDMNFKCQR-----IDNAFEEKEEELRDLYADLKHKLNIADI*IMDLKGS 414
++ + D K + ++N E E ++ A+L+ L++ + +
Sbjct: 111 SKEGLGQQPKTDPKEKAKSETRDWLNNVVSELESQIDSFEAELEG-LSVKKGKTRPPRLT 169
Query: 415 LVDTNVRIYPTNGF-LEYIKKI--KDDKVPENILKLKNGSDYETKCNVKDFDYFA 570
++T++ + + LE I ++ D+ PE + +K+ D + N DFD F+
Sbjct: 170 HLETSITRHKDHIIKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQDDFDEFS 224
>At4g32070.1 68417.m04564 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein / tetratricopeptide repeat
(TPR)-containing protein similar to SP|Q99614
Tetratricopeptide repeat protein 1 {Homo sapiens};
contains Pfam profiles PF00564: PB1 domain, PF00515: TPR
Domain
Length = 811
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 181 EELEKDYLETQKVCQKQIKS--NQELRKREWDK 273
+E+EKD+++ Q VC ++K + LRK + K
Sbjct: 180 DEMEKDFVDVQPVCAARLKKIVKERLRKSKKKK 212
>At3g47890.1 68416.m05222 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1568
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +1
Query: 151 EKLEQALNLCEELEKDYLETQKVCQKQ 231
EK Q L + + LEK++ Q +C+++
Sbjct: 666 EKTNQGLEIMQHLEKEFYHLQNLCERK 692
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,795,435
Number of Sequences: 28952
Number of extensions: 237210
Number of successful extensions: 1004
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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