Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0802
(662 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118920-1|AAM50780.1| 320|Drosophila melanogaster LD23608p pro... 270 8e-73
AE013599-3740|AAF47106.2| 331|Drosophila melanogaster CG2827-PA... 270 8e-73
BT010249-1|AAQ23567.1| 526|Drosophila melanogaster RE39287p pro... 30 3.2
AY113212-1|AAM29217.1| 510|Drosophila melanogaster AT07117p pro... 30 3.2
AE014297-1183|AAO41541.1| 510|Drosophila melanogaster CG14691-P... 30 3.2
AE014297-1182|AAF54545.2| 522|Drosophila melanogaster CG14691-P... 30 3.2
BT029926-1|ABM92800.1| 563|Drosophila melanogaster IP06983p pro... 29 5.6
AY071297-1|AAL48919.1| 223|Drosophila melanogaster RE32705p pro... 29 5.6
AY069650-1|AAL39795.1| 1075|Drosophila melanogaster LD41918p pro... 29 5.6
AF245515-1|AAF73426.1| 1075|Drosophila melanogaster Ran binding ... 29 5.6
AE014296-1551|AAN11977.1| 215|Drosophila melanogaster CG5021-PB... 29 5.6
AE014296-1550|AAF50344.2| 218|Drosophila melanogaster CG5021-PA... 29 5.6
AE013599-2096|AAF58114.2| 1075|Drosophila melanogaster CG33139-P... 29 5.6
>AY118920-1|AAM50780.1| 320|Drosophila melanogaster LD23608p
protein.
Length = 320
Score = 270 bits (663), Expect = 8e-73
Identities = 127/187 (67%), Positives = 153/187 (81%)
Frame = +2
Query: 89 LNQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKDNGS 268
L +LK+ +T+VADTGDFEA+ YKPTDATTNPSLILSA+ ME+YQ ++ KA++Y K
Sbjct: 4 LQELKKITTIVADTGDFEAINIYKPTDATTNPSLILSASSMERYQPLVQKAVEYAKGKKG 63
Query: 269 SIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIAKAIKFINLFAEHGI 448
S+ EQVAE +D L VLFG EILK++PGRVS E+DARLSFD S+ KA+K I L+ G+
Sbjct: 64 SVSEQVAEAMDYLCVLFGTEILKVVPGRVSTEIDARLSFDTKKSVEKALKLIALYKSLGV 123
Query: 449 KKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAEANVTLISPFVGRIL 628
KERILIKLASTWEGI+AA+ LE +HG+HCNLTLLFS QA+ACAEA VTLISPFVGRIL
Sbjct: 124 DKERILIKLASTWEGIKAAEILENEHGVHCNLTLLFSFAQAVACAEAGVTLISPFVGRIL 183
Query: 629 DWYVEHT 649
DWYV +T
Sbjct: 184 DWYVANT 190
>AE013599-3740|AAF47106.2| 331|Drosophila melanogaster CG2827-PA
protein.
Length = 331
Score = 270 bits (663), Expect = 8e-73
Identities = 127/187 (67%), Positives = 153/187 (81%)
Frame = +2
Query: 89 LNQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKDNGS 268
L +LK+ +T+VADTGDFEA+ YKPTDATTNPSLILSA+ ME+YQ ++ KA++Y K
Sbjct: 15 LQELKKITTIVADTGDFEAINIYKPTDATTNPSLILSASSMERYQPLVQKAVEYAKGKKG 74
Query: 269 SIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIAKAIKFINLFAEHGI 448
S+ EQVAE +D L VLFG EILK++PGRVS E+DARLSFD S+ KA+K I L+ G+
Sbjct: 75 SVSEQVAEAMDYLCVLFGTEILKVVPGRVSTEIDARLSFDTKKSVEKALKLIALYKSLGV 134
Query: 449 KKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAEANVTLISPFVGRIL 628
KERILIKLASTWEGI+AA+ LE +HG+HCNLTLLFS QA+ACAEA VTLISPFVGRIL
Sbjct: 135 DKERILIKLASTWEGIKAAEILENEHGVHCNLTLLFSFAQAVACAEAGVTLISPFVGRIL 194
Query: 629 DWYVEHT 649
DWYV +T
Sbjct: 195 DWYVANT 201
>BT010249-1|AAQ23567.1| 526|Drosophila melanogaster RE39287p
protein.
Length = 526
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 107 HSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKDNGSSI 274
H V D+GD + YK T + +N S + ++A Q ++ + + G G I
Sbjct: 102 HFLVNKDSGDKSDEENYKATSSNSNESNVQASAHKGDRQKLISEVAQVGDSKGGRI 157
>AY113212-1|AAM29217.1| 510|Drosophila melanogaster AT07117p
protein.
Length = 510
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -2
Query: 328 FTPKKHTQHIQSFSHLFFNGASIILSIFNSFIKNVLILFHTSSREY*AW 182
F KKH +I F L + S+IL + + + V ILF SS ++ W
Sbjct: 146 FHGKKHRPYIMLFVGLCVSIGSMILPLLSYLLLPVPILFTVSSMKFRTW 194
>AE014297-1183|AAO41541.1| 510|Drosophila melanogaster CG14691-PB,
isoform B protein.
Length = 510
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -2
Query: 328 FTPKKHTQHIQSFSHLFFNGASIILSIFNSFIKNVLILFHTSSREY*AW 182
F KKH +I F L + S+IL + + + V ILF SS ++ W
Sbjct: 146 FHGKKHRPYIMLFVGLCVSIGSMILPLLSYLLLPVPILFTVSSMKFRTW 194
>AE014297-1182|AAF54545.2| 522|Drosophila melanogaster CG14691-PA,
isoform A protein.
Length = 522
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -2
Query: 328 FTPKKHTQHIQSFSHLFFNGASIILSIFNSFIKNVLILFHTSSREY*AW 182
F KKH +I F L + S+IL + + + V ILF SS ++ W
Sbjct: 146 FHGKKHRPYIMLFVGLCVSIGSMILPLLSYLLLPVPILFTVSSMKFRTW 194
>BT029926-1|ABM92800.1| 563|Drosophila melanogaster IP06983p
protein.
Length = 563
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -1
Query: 311 HS-AYPKFQPLVLQWSFHYPFH 249
HS ++ +F P+ L++SFHY FH
Sbjct: 114 HSVSFARFVPVALEFSFHYVFH 135
>AY071297-1|AAL48919.1| 223|Drosophila melanogaster RE32705p
protein.
Length = 223
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 319 KKHTQHIQSFSHLFFNGASIILSIFNSFIKNVLI 218
+K+T +F HLFF GA+I++ +F + + I
Sbjct: 33 QKYTHPYVTFFHLFFRGAAILIYMFCGWFSDSFI 66
>AY069650-1|AAL39795.1| 1075|Drosophila melanogaster LD41918p
protein.
Length = 1075
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -1
Query: 311 HS-AYPKFQPLVLQWSFHYPFH 249
HS ++ +F P+ L++SFHY FH
Sbjct: 320 HSVSFARFVPVALEFSFHYVFH 341
>AF245515-1|AAF73426.1| 1075|Drosophila melanogaster Ran binding
protein 11 protein.
Length = 1075
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -1
Query: 311 HS-AYPKFQPLVLQWSFHYPFH 249
HS ++ +F P+ L++SFHY FH
Sbjct: 320 HSVSFARFVPVALEFSFHYVFH 341
>AE014296-1551|AAN11977.1| 215|Drosophila melanogaster CG5021-PB,
isoform B protein.
Length = 215
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 319 KKHTQHIQSFSHLFFNGASIILSIFNSFIKNVLI 218
+K+T +F HLFF GA+I++ +F + + I
Sbjct: 30 QKYTHPYVTFFHLFFRGAAILIYMFCGWFSDSFI 63
>AE014296-1550|AAF50344.2| 218|Drosophila melanogaster CG5021-PA,
isoform A protein.
Length = 218
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 319 KKHTQHIQSFSHLFFNGASIILSIFNSFIKNVLI 218
+K+T +F HLFF GA+I++ +F + + I
Sbjct: 33 QKYTHPYVTFFHLFFRGAAILIYMFCGWFSDSFI 66
>AE013599-2096|AAF58114.2| 1075|Drosophila melanogaster CG33139-PA
protein.
Length = 1075
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -1
Query: 311 HS-AYPKFQPLVLQWSFHYPFH 249
HS ++ +F P+ L++SFHY FH
Sbjct: 320 HSVSFARFVPVALEFSFHYVFH 341
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,446,863
Number of Sequences: 53049
Number of extensions: 639845
Number of successful extensions: 1759
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1757
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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