Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0801
         (372 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK131260-1|BAD18438.1|  528|Homo sapiens protein ( Homo sapiens ...    29   6.3  

>AK131260-1|BAD18438.1|  528|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16192 fis, clone BRTHA2017364, weakly  similar
           to ATP-DEPENDENT RNA HELICASE T26G10.1 IN CHROMOSOME
           III. ).
          Length = 528

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
 Frame = -2

Query: 251 QLEDLSTTLNLRMAQHEEDLKNAATTDLPHKTI---ASLSREFAEFKSFVCNAISTLKTQ 81
           +LE+L    +   +Q    L  A T +L  + +    SLS+    FKS V       KTQ
Sbjct: 187 RLEELEGRSSKSSSQAPRVLVLAPTAELASQVLDNCRSLSKSGVPFKSMVVTGGFRQKTQ 246

Query: 80  IELLTLGLDRHEMMSRRKVLLLH 12
           +E L  G+D       R + L+H
Sbjct: 247 LENLQQGVDVLIATPGRFLFLIH 269


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,179,003
Number of Sequences: 237096
Number of extensions: 934130
Number of successful extensions: 1528
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1528
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)