Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0801
(372 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 1.5
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 2.7
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 2.7
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 2.7
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 2.7
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 2.7
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 2.7
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 2.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 2.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 2.7
DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein. 21 4.7
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 6.2
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.6 bits (46), Expect = 1.5
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1
Query: 180 YHRSPT*NHSEFIP 139
+H+SP+ NHS +P
Sbjct: 631 FHQSPSQNHSSAVP 644
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 362 LCRHLQYSHFNNYFSSELTQTKNL 291
L + +YS++NNY ++ T K L
Sbjct: 85 LSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 362 LCRHLQYSHFNNYFSSELTQTKNL 291
L + +YS++NNY ++ T K L
Sbjct: 85 LSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 362 LCRHLQYSHFNNYFSSELTQTKNL 291
L + +YS++NNY ++ T K L
Sbjct: 85 LSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 362 LCRHLQYSHFNNYFSSELTQTKNL 291
L + +YS++NNY ++ T K L
Sbjct: 85 LSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 362 LCRHLQYSHFNNYFSSELTQTKNL 291
L + +YS++NNY ++ T K L
Sbjct: 85 LSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 362 LCRHLQYSHFNNYFSSELTQTKNL 291
L + +YS++NNY ++ T K L
Sbjct: 85 LSNNYKYSNYNNYNNNYNTNYKKL 108
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 362 LCRHLQYSHFNNYFSSELTQTKNL 291
L + +YS++NNY ++ T K L
Sbjct: 85 LSNNYKYSNYNNYNNNYNTNYKKL 108
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 2.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 1 VLTP*SNSTFRRDIISCLSRPKVSNSI 81
VL P + FR+D+ S R SNS+
Sbjct: 88 VLLPFPAAAFRQDVHSAAYRCVASNSV 114
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 2.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 1 VLTP*SNSTFRRDIISCLSRPKVSNSI 81
VL P + FR+D+ S R SNS+
Sbjct: 88 VLLPFPAAAFRQDVHSAAYRCVASNSV 114
>DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein.
Length = 135
Score = 21.0 bits (42), Expect = 4.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 208 CAILKFSVVDKSSS 249
CA+ KFS VDK +
Sbjct: 65 CAMKKFSFVDKDGN 78
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.6 bits (41), Expect = 6.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 81 LSFQSTYCITHKGFKFSK 134
LS STY ++ G+K S+
Sbjct: 15 LSIASTYVVSVAGYKHSR 32
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,399
Number of Sequences: 438
Number of extensions: 1802
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8928360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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