Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0797
(569 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70857-9|AAB09174.1| 261|Caenorhabditis elegans C.elegans homeo... 237 4e-63
Z77670-4|CAB01249.2| 439|Caenorhabditis elegans Hypothetical pr... 209 9e-55
AF325178-1|AAG49583.1| 439|Caenorhabditis elegans CEH-32 protein. 209 9e-55
U70857-8|AAB09173.2| 256|Caenorhabditis elegans C.elegans homeo... 196 1e-50
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 140 6e-34
AJ000533-1|CAA04166.1| 265|Caenorhabditis elegans CEH-25 homeob... 55 4e-08
AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice... 55 4e-08
AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice... 55 4e-08
AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated... 55 4e-08
AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated... 55 4e-08
AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated... 55 4e-08
AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice... 54 7e-08
AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice... 54 7e-08
AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated... 54 7e-08
AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated... 54 7e-08
Z81045-1|CAB02816.1| 356|Caenorhabditis elegans Hypothetical pr... 51 7e-07
U41547-5|AAX88831.1| 272|Caenorhabditis elegans C.elegans homeo... 50 2e-06
Z95623-1|CAB09133.1| 314|Caenorhabditis elegans Hypothetical pr... 48 4e-06
AC006692-6|AAM48547.1| 153|Caenorhabditis elegans Uncoordinated... 48 4e-06
U40935-7|AAA81691.3| 338|Caenorhabditis elegans C.elegans homeo... 47 8e-06
U01303-1|AAC46471.1| 338|Caenorhabditis elegans Ceh-20 protein. 47 8e-06
AC006835-2|AAF40014.1| 229|Caenorhabditis elegans Hypothetical ... 47 8e-06
Z82264-11|CAB05155.2| 262|Caenorhabditis elegans Hypothetical p... 45 3e-05
Z68114-11|CAA92154.1| 329|Caenorhabditis elegans Hypothetical p... 45 4e-05
AL033514-1|CAA22081.2| 275|Caenorhabditis elegans Hypothetical ... 44 8e-05
AF172092-1|AAD48876.1| 275|Caenorhabditis elegans homeodomain p... 44 8e-05
Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z73422-5|CAE54882.1| 323|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z73422-4|CAA97770.1| 319|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U55856-2|AAA98021.1| 197|Caenorhabditis elegans Touch abnormal ... 44 1e-04
M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein ( C.ele... 44 1e-04
L37867-1|AAA63155.1| 319|Caenorhabditis elegans homeodomain pro... 44 1e-04
L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein pr... 44 1e-04
U72348-1|AAB17273.1| 355|Caenorhabditis elegans putative transc... 43 1e-04
U39740-5|AAA80428.2| 355|Caenorhabditis elegans Lim domain fami... 43 1e-04
M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein ( C.ele... 43 1e-04
L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal p... 43 1e-04
AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein. 43 1e-04
AF038608-13|AAC25819.1| 253|Caenorhabditis elegans Hypothetical... 43 1e-04
Z81085-1|CAB03112.3| 263|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z32680-4|CAA83601.1| 273|Caenorhabditis elegans Hypothetical pr... 41 5e-04
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 41 5e-04
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 41 5e-04
AJ312288-1|CAC41972.1| 278|Caenorhabditis elegans putative tran... 41 5e-04
AL033514-3|CAC70124.1| 218|Caenorhabditis elegans Hypothetical ... 40 0.001
AF172090-1|AAD48874.1| 218|Caenorhabditis elegans homeodomain p... 40 0.001
U73946-1|AAB18328.1| 452|Caenorhabditis elegans CeLIM-7 protein. 40 0.001
AF067210-1|AAC16985.1| 452|Caenorhabditis elegans Lim domain fa... 40 0.001
L19249-1|AAC37167.1| 303|Caenorhabditis elegans homeobox protei... 39 0.002
L14429-3|AAA28218.1| 305|Caenorhabditis elegans C.elegans homeo... 39 0.002
Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z46794-6|CAA86776.1| 416|Caenorhabditis elegans Hypothetical pr... 39 0.003
X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein ... 39 0.003
AY246429-1|AAO91836.1| 209|Caenorhabditis elegans homeodomain p... 39 0.003
AY246428-1|AAO91835.1| 209|Caenorhabditis elegans homeodomain p... 39 0.003
AF003137-4|AAB93639.2| 209|Caenorhabditis elegans C.elegans hom... 39 0.003
U56860-2|AAA98706.3| 225|Caenorhabditis elegans Defective phary... 38 0.004
AY766389-1|AAV34757.1| 170|Caenorhabditis elegans PHA-2 protein. 38 0.004
AL031620-3|CAA20928.1| 310|Caenorhabditis elegans Hypothetical ... 38 0.004
U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plu... 38 0.005
U64600-4|AAK39201.1| 299|Caenorhabditis elegans C.elegans homeo... 38 0.005
U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeo... 38 0.005
AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein. 38 0.005
AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein. 38 0.005
AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox ... 38 0.005
Z77133-4|CAB00867.3| 232|Caenorhabditis elegans Hypothetical pr... 38 0.007
U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain fami... 38 0.007
L15201-5|AAA27943.2| 219|Caenorhabditis elegans Egg laying defe... 38 0.007
AY205144-1|AAO46042.2| 201|Caenorhabditis elegans NK-2 family h... 38 0.007
Z81036-4|CAB02740.2| 134|Caenorhabditis elegans Hypothetical pr... 37 0.009
U49944-3|AAM51525.1| 341|Caenorhabditis elegans Mesodermal line... 37 0.012
U41545-3|ABN43093.1| 152|Caenorhabditis elegans Hypothetical pr... 37 0.012
Z48783-8|CAA88702.2| 308|Caenorhabditis elegans Hypothetical pr... 36 0.015
Z48582-7|CAA88468.2| 308|Caenorhabditis elegans Hypothetical pr... 36 0.015
Z77136-3|CAB00886.1| 252|Caenorhabditis elegans Hypothetical pr... 36 0.020
X17075-1|CAA34927.1| 75|Caenorhabditis elegans ceh-11 protein. 36 0.020
L19247-1|AAC37166.1| 223|Caenorhabditis elegans homeobox protei... 36 0.020
L15201-6|AAP82660.1| 222|Caenorhabditis elegans Egg laying defe... 36 0.020
L15201-4|AAN84878.1| 223|Caenorhabditis elegans Egg laying defe... 36 0.020
AF025454-2|AAC71153.2| 186|Caenorhabditis elegans Hypothetical ... 36 0.027
Z46241-10|CAH19082.1| 268|Caenorhabditis elegans Hypothetical p... 35 0.036
Z46241-9|CAA86322.2| 270|Caenorhabditis elegans Hypothetical pr... 35 0.036
X62782-1|CAA44619.1| 208|Caenorhabditis elegans pal-1 protein. 35 0.036
X57140-1|CAA40419.1| 71|Caenorhabditis elegans ceh-3 protein. 35 0.036
Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical pr... 35 0.047
AL132853-1|CAB60440.1| 234|Caenorhabditis elegans Hypothetical ... 34 0.063
AL132858-4|CAB60479.2| 338|Caenorhabditis elegans Hypothetical ... 34 0.083
AL132858-3|CAB60478.2| 391|Caenorhabditis elegans Hypothetical ... 34 0.083
AF381629-1|AAL12002.1| 223|Caenorhabditis elegans homeodomain p... 34 0.083
AF381628-1|AAL12001.1| 372|Caenorhabditis elegans homeodomain p... 34 0.083
AF381627-1|AAL12000.1| 332|Caenorhabditis elegans homeodomain p... 34 0.083
Z49908-6|CAA90100.3| 327|Caenorhabditis elegans Hypothetical pr... 33 0.11
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 33 0.11
AC024847-9|AAR30201.1| 147|Caenorhabditis elegans C.elegans hom... 33 0.11
Z68008-6|CAA92001.1| 362|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z70780-17|CAA94830.3| 264|Caenorhabditis elegans Hypothetical p... 33 0.19
Z70754-11|CAA94780.3| 264|Caenorhabditis elegans Hypothetical p... 33 0.19
U39648-4|AAK39290.1| 220|Caenorhabditis elegans Hypothetical pr... 33 0.19
U28733-1|AAA68302.2| 982|Caenorhabditis elegans Patched related... 33 0.19
Z82279-3|CAD62039.1| 106|Caenorhabditis elegans Hypothetical pr... 32 0.25
Z82279-2|CAB05260.2| 256|Caenorhabditis elegans Hypothetical pr... 32 0.25
Z81143-3|CAB03519.2| 276|Caenorhabditis elegans Hypothetical pr... 32 0.25
Z11795-1|CAA77838.1| 130|Caenorhabditis elegans pceh16-1 protei... 32 0.25
U40933-7|AAA81676.4| 122|Caenorhabditis elegans C.elegans homeo... 32 0.25
U40933-6|AAQ23123.1| 199|Caenorhabditis elegans C.elegans homeo... 32 0.25
AY151210-1|AAN72827.1| 106|Caenorhabditis elegans COG-1B protein. 32 0.25
AY151209-1|AAN72826.1| 256|Caenorhabditis elegans COG-1A protein. 32 0.25
Z66494-8|CAA91264.1| 84|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z11794-1|CAA77837.1| 66|Caenorhabditis elegans ceh16-1 protein... 32 0.33
X52811-1|CAB57217.1| 60|Caenorhabditis elegans protein ( Caeno... 32 0.33
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 32 0.33
L19639-1|AAC37168.1| 253|Caenorhabditis elegans homeobox protei... 32 0.33
L19248-1|AAB04137.1| 253|Caenorhabditis elegans homeobox protei... 32 0.33
AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein. 32 0.33
AF091459-1|AAC36745.1| 84|Caenorhabditis elegans homeodomain p... 32 0.33
AF039720-2|AAB96698.1| 180|Caenorhabditis elegans C.elegans hom... 32 0.33
AF016684-15|AAB66214.1| 543|Caenorhabditis elegans Hypothetical... 32 0.33
AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans hom... 32 0.33
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 32 0.33
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 32 0.33
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 32 0.33
AC006605-9|AAK85445.1| 253|Caenorhabditis elegans Abnormal cell... 32 0.33
AL590342-2|CAC35859.3| 685|Caenorhabditis elegans Hypothetical ... 31 0.44
AL032622-4|CAA21499.1| 738|Caenorhabditis elegans Y66A7A.5 prot... 31 0.44
Z48621-10|CAA88539.1| 225|Caenorhabditis elegans Hypothetical p... 31 0.58
U39740-3|AAA80426.2| 542|Caenorhabditis elegans C.elegans homeo... 31 0.58
U39740-2|AAM69077.1| 540|Caenorhabditis elegans C.elegans homeo... 31 0.58
U16367-1|AAA52203.1| 542|Caenorhabditis elegans CEH-18 protein. 31 0.58
AF286218-1|AAF88063.1| 225|Caenorhabditis elegans VAB-15 protein. 31 0.58
Z81046-3|CAB02821.1| 257|Caenorhabditis elegans Hypothetical pr... 31 0.77
L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeo... 31 0.77
AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene... 31 0.77
X17077-1|CAA34929.1| 202|Caenorhabditis elegans ceh-13 homeodom... 30 1.0
AC006679-1|AAK84466.1| 202|Caenorhabditis elegans C.elegans hom... 30 1.0
Z73428-3|CAA97809.1| 247|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical pr... 30 1.3
X96636-1|CAA65441.1| 263|Caenorhabditis elegans vab-7 protein. 30 1.3
U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-1... 30 1.3
U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable abnorm... 30 1.3
U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein. 30 1.3
U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein. 30 1.3
AF016417-6|AAB65283.2| 313|Caenorhabditis elegans Hypothetical ... 30 1.3
Z47072-1|CAA87368.1| 252|Caenorhabditis elegans Hypothetical pr... 29 1.8
X64904-1|CAA46108.1| 184|Caenorhabditis elegans unc-4 protein. 29 1.8
M22363-2|AAA28159.1| 429|Caenorhabditis elegans protein ( C.ele... 29 1.8
M22363-1|AAA28158.1| 467|Caenorhabditis elegans protein ( C.ele... 29 1.8
L10990-6|AAB59176.1| 467|Caenorhabditis elegans Uncoordinated p... 29 1.8
L10990-5|AAB59175.1| 429|Caenorhabditis elegans Uncoordinated p... 29 1.8
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 29 1.8
U41017-4|AAC48214.1| 278|Caenorhabditis elegans C.elegans homeo... 29 3.1
Z73971-3|CAA98253.1| 265|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z81057-4|CAB02918.1| 559|Caenorhabditis elegans Hypothetical pr... 27 7.2
X52812-1|CAB57216.1| 66|Caenorhabditis elegans protein ( Caeno... 27 7.2
U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily as... 27 7.2
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass... 27 7.2
U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily ass... 27 7.2
U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical p... 27 7.2
U50184-2|AAB93323.1| 344|Caenorhabditis elegans C.elegans homeo... 27 7.2
U19995-1|AAA93063.1| 344|Caenorhabditis elegans ceh-10 protein. 27 7.2
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 27 7.2
U55854-5|AAA98014.1| 103|Caenorhabditis elegans Hypothetical pr... 27 9.5
U55376-2|AAA98004.1| 132|Caenorhabditis elegans C.elegans homeo... 27 9.5
U40419-5|AAA81426.1| 165|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical ... 27 9.5
>U70857-9|AAB09174.1| 261|Caenorhabditis elegans C.elegans homeobox
protein 33 protein.
Length = 261
Score = 237 bits (580), Expect = 4e-63
Identities = 103/164 (62%), Positives = 131/164 (79%)
Frame = +2
Query: 2 VCEVLQQAGNIYRLGRFLWSLPACERLHAHESVLKAKAMVAFHRGNFKELYRLLESHNFS 181
+CE L + + +L +F+W++ + + ++ +LKA+A +AFH NFKELYR++ESH+F+
Sbjct: 28 ICEAL--SNDARKLSQFVWTVLERDEMRNNQYILKAQAFLAFHSNNFKELYRIIESHHFA 85
Query: 182 AHNHAKLQSLWLKAHYMEAERLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSR 361
+ +H LQ WL AHY EAE++RGR LGAVGKYR+RRK+PLPRTIWDGEETSYCF++KSR
Sbjct: 86 SEHHLPLQEWWLNAHYHEAEKIRGRQLGAVGKYRIRRKYPLPRTIWDGEETSYCFRDKSR 145
Query: 362 SVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDR 493
+LRDWY N YPSPREKRELAE T LT QVSNWFKNRRQRDR
Sbjct: 146 VLLRDWYCRNSYPSPREKRELAEKTHLTVTQVSNWFKNRRQRDR 189
>Z77670-4|CAB01249.2| 439|Caenorhabditis elegans Hypothetical
protein W05E10.3 protein.
Length = 439
Score = 209 bits (511), Expect = 9e-55
Identities = 96/191 (50%), Positives = 139/191 (72%), Gaps = 4/191 (2%)
Frame = +2
Query: 5 CEVLQQAGNIYRLGRFLWSLPA--CERLHAHESVLKAKAMVAFHRGNFKELYRLLESHNF 178
CE L+ G++ L RF+ ++P + + +E+ L+A+A+V FH +F+ELY +LE++ F
Sbjct: 77 CEQLETDGDVDGLFRFMCTIPPQKTQEVAGNEAFLRARALVCFHASHFRELYAILENNKF 136
Query: 179 SAHNHAKLQSLWLKAHYMEAERLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKS 358
S H KLQ +W +AHY E E+ RG+ L AV KYRVR+K+P+PRTIWDGE+ ++CFKE++
Sbjct: 137 SPKYHPKLQEMWHEAHYREQEKNRGKSLCAVDKYRVRKKYPMPRTIWDGEQKTHCFKERT 196
Query: 359 RSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDR--QAEHKDSGTGGDK 532
RS+LR+WYL +PYP+P +K+ELA TGLT +QV NWFKNRRQRDR A++K + G +
Sbjct: 197 RSLLREWYLKDPYPNPPKKKELANATGLTQMQVGNWFKNRRQRDRAAAAKNKQNIIGVEL 256
Query: 533 QLDSSTDDDSE 565
+ SS DS+
Sbjct: 257 KKTSSDMSDSD 267
>AF325178-1|AAG49583.1| 439|Caenorhabditis elegans CEH-32 protein.
Length = 439
Score = 209 bits (511), Expect = 9e-55
Identities = 96/191 (50%), Positives = 139/191 (72%), Gaps = 4/191 (2%)
Frame = +2
Query: 5 CEVLQQAGNIYRLGRFLWSLPA--CERLHAHESVLKAKAMVAFHRGNFKELYRLLESHNF 178
CE L+ G++ L RF+ ++P + + +E+ L+A+A+V FH +F+ELY +LE++ F
Sbjct: 77 CEQLETDGDVDGLFRFMCTIPPQKTQEVAGNEAFLRARALVCFHASHFRELYAILENNKF 136
Query: 179 SAHNHAKLQSLWLKAHYMEAERLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKS 358
S H KLQ +W +AHY E E+ RG+ L AV KYRVR+K+P+PRTIWDGE+ ++CFKE++
Sbjct: 137 SPKYHPKLQEMWHEAHYREQEKNRGKSLCAVDKYRVRKKYPMPRTIWDGEQKTHCFKERT 196
Query: 359 RSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDR--QAEHKDSGTGGDK 532
RS+LR+WYL +PYP+P +K+ELA TGLT +QV NWFKNRRQRDR A++K + G +
Sbjct: 197 RSLLREWYLKDPYPNPPKKKELANATGLTQMQVGNWFKNRRQRDRAAAAKNKQNIIGVEL 256
Query: 533 QLDSSTDDDSE 565
+ SS DS+
Sbjct: 257 KKTSSDMSDSD 267
>U70857-8|AAB09173.2| 256|Caenorhabditis elegans C.elegans homeobox
protein 34 protein.
Length = 256
Score = 196 bits (477), Expect = 1e-50
Identities = 94/177 (53%), Positives = 119/177 (67%)
Frame = +2
Query: 20 QAGNIYRLGRFLWSLPACERLHAHESVLKAKAMVAFHRGNFKELYRLLESHNFSAHNHAK 199
Q G +L F+++LP C ++ ESVLKA+A+V F N+K LY+LLE FS HNH
Sbjct: 35 QTGRTEQLANFIYNLPQCYQVM--ESVLKAQALVYFTTQNWKMLYKLLECSKFSPHNHTV 92
Query: 200 LQSLWLKAHYMEAERLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDW 379
LQ+LWL AHY EA + + R LGAV KYR+R+K P P TIWDGEET+YCFK KSR+VLRD
Sbjct: 93 LQNLWLDAHYKEAAKTKDRELGAVCKYRIRKKNPFPNTIWDGEETNYCFKSKSRNVLRDA 152
Query: 380 YLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTGGDKQLDSST 550
Y YPS +KR LA+ T L+ +QVSNWFKN+RQR+R A D + D +
Sbjct: 153 YKKCQYPSVEDKRRLAQQTELSIIQVSNWFKNKRQRERAAGQLDRSSARSNDSDDGS 209
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 140 bits (339), Expect = 6e-34
Identities = 61/135 (45%), Positives = 89/135 (65%), Gaps = 1/135 (0%)
Frame = +2
Query: 92 ESVLKAKAMVAFHRGNFKELYRLLESHNFSAHNHAKLQSLWLKAHYMEAERLRGRPLGAV 271
E+++ A +H F+ L+ LL + +F ++ LQ +W A Y E++ RG+ L V
Sbjct: 140 EAIIVAYTYALYHSNEFETLFHLLSNRHFQQRHYNDLQDIWHHARYKESQLKRGKELNPV 199
Query: 272 GKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYLH-NPYPSPREKRELAETTGLTT 448
KYR+RRKFP P+TIWDGEE Y FK+ SR L+ ++ + + YP+ +KRE++ TGL
Sbjct: 200 EKYRLRRKFPAPKTIWDGEEIVYSFKDSSRKFLKQFFRNVSEYPTQEQKREISRATGLKI 259
Query: 449 VQVSNWFKNRRQRDR 493
VQ+SNWFKNRRQRD+
Sbjct: 260 VQISNWFKNRRQRDK 274
>AJ000533-1|CAA04166.1| 265|Caenorhabditis elegans CEH-25 homeobox
protein protein.
Length = 265
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHN---PYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
F +++ + R W HN PYPS +K++LA+ TGLT +QV+NWF N R+R
Sbjct: 100 FSKEAITKFRAWLFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 150
>AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice
variant 1b-7b protein.
Length = 527
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHN---PYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
F +++ + R W HN PYPS +K++LA+ TGLT +QV+NWF N R+R
Sbjct: 362 FSKEAITKFRAWLFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 412
>AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice
variant 1a-7b protein.
Length = 564
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHN---PYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
F +++ + R W HN PYPS +K++LA+ TGLT +QV+NWF N R+R
Sbjct: 399 FSKEAITKFRAWLFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 449
>AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated
protein 62, isoform g protein.
Length = 490
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHN---PYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
F +++ + R W HN PYPS +K++LA+ TGLT +QV+NWF N R+R
Sbjct: 325 FSKEAITKFRAWLFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 375
>AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated
protein 62, isoform b protein.
Length = 527
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHN---PYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
F +++ + R W HN PYPS +K++LA+ TGLT +QV+NWF N R+R
Sbjct: 362 FSKEAITKFRAWLFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 412
>AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated
protein 62, isoform a protein.
Length = 564
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHN---PYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
F +++ + R W HN PYPS +K++LA+ TGLT +QV+NWF N R+R
Sbjct: 399 FSKEAITKFRAWLFHNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 449
>AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice
variant 1b-7a protein.
Length = 523
Score = 54.0 bits (124), Expect = 7e-08
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHN---PYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
F +++ + LR W N PYPS +K++LA+ TGLT +QV+NWF N R+R
Sbjct: 358 FPKQATNRLRQWLFQNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 408
>AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice
variant 1a-7a protein.
Length = 560
Score = 54.0 bits (124), Expect = 7e-08
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHN---PYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
F +++ + LR W N PYPS +K++LA+ TGLT +QV+NWF N R+R
Sbjct: 395 FPKQATNRLRQWLFQNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 445
>AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated
protein 62, isoform e protein.
Length = 523
Score = 54.0 bits (124), Expect = 7e-08
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHN---PYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
F +++ + LR W N PYPS +K++LA+ TGLT +QV+NWF N R+R
Sbjct: 358 FPKQATNRLRQWLFQNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 408
>AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated
protein 62, isoform f protein.
Length = 560
Score = 54.0 bits (124), Expect = 7e-08
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHN---PYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
F +++ + LR W N PYPS +K++LA+ TGLT +QV+NWF N R+R
Sbjct: 395 FPKQATNRLRQWLFQNLTHPYPSEEQKKQLAKETGLTILQVNNWFINARRR 445
>Z81045-1|CAB02816.1| 356|Caenorhabditis elegans Hypothetical
protein C36F7.1 protein.
Length = 356
Score = 50.8 bits (116), Expect = 7e-07
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Frame = +2
Query: 368 LRDWYLH----NPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTGGDKQ 535
L+DW LH NPYPS +K LA TG+T QVS WF N R+R ++ E+K + + +++
Sbjct: 130 LKDW-LHSHRKNPYPSKADKVMLAVGTGMTLTQVSTWFANARRRLKK-ENKMTWSPQNRR 187
Query: 536 LDSSTDDDSE 565
D DD+ +
Sbjct: 188 GDGCDDDEDD 197
>U41547-5|AAX88831.1| 272|Caenorhabditis elegans C.elegans homeobox
protein 60 protein.
Length = 272
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = +2
Query: 344 FKEKSRSVLRDWY---LHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQ 496
F + + +L++W+ NPYPS +EK ELA+ + QV+NWF N+R R +Q
Sbjct: 146 FDKNTTDILQNWFHDHRQNPYPSDQEKAELAKQCNIKISQVNNWFGNQRIRTKQ 199
>Z95623-1|CAB09133.1| 314|Caenorhabditis elegans Hypothetical
protein Y53C12C.1 protein.
Length = 314
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTG 523
F + L + +L +PYPSP E+ +L + T L ++ WF NRR + R+ S
Sbjct: 210 FTNEQLQSLEEVFLRDPYPSPNERADLVKRTNLPEARIQVWFSNRRAKWRKTNANGSDRD 269
Query: 524 GDKQLDSSTDD 556
+ S TDD
Sbjct: 270 ELRAERSETDD 280
>AC006692-6|AAM48547.1| 153|Caenorhabditis elegans Uncoordinated
protein 62, isoform c protein.
Length = 153
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +2
Query: 389 NPYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
+PYPS +K++LA+ TGLT +QV+NWF N R+R
Sbjct: 6 HPYPSEEQKKQLAKETGLTILQVNNWFINARRR 38
>U40935-7|AAA81691.3| 338|Caenorhabditis elegans C.elegans homeobox
protein 20 protein.
Length = 338
Score = 47.2 bits (107), Expect = 8e-06
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +2
Query: 344 FKEKSRSVLRDWY---LHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
F +++ VL +++ L NPYPS K +LA +T QVSNWF N+R R
Sbjct: 195 FSKQATEVLNEYFYGHLSNPYPSEEAKEDLARQCNITVSQVSNWFGNKRIR 245
>U01303-1|AAC46471.1| 338|Caenorhabditis elegans Ceh-20 protein.
Length = 338
Score = 47.2 bits (107), Expect = 8e-06
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +2
Query: 344 FKEKSRSVLRDWY---LHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
F +++ VL +++ L NPYPS K +LA +T QVSNWF N+R R
Sbjct: 195 FSKQATEVLNEYFYGHLSNPYPSEEAKEDLARQCNITVSQVSNWFGNKRIR 245
>AC006835-2|AAF40014.1| 229|Caenorhabditis elegans Hypothetical
protein ZK993.1 protein.
Length = 229
Score = 47.2 bits (107), Expect = 8e-06
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTG 523
F E+ ++L + YP + ELA L +V WFKNRR ++R+ + DS T
Sbjct: 116 FSEEQLNILETTFSTTHYPDATTREELAVQCSLKEERVEVWFKNRRAKERKQKKDDSRTS 175
Query: 524 GDKQLDSSTDDDSE 565
DS D+ E
Sbjct: 176 KHSGDDSECDESDE 189
>Z82264-11|CAB05155.2| 262|Caenorhabditis elegans Hypothetical
protein C49C3.5 protein.
Length = 262
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 338 YCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKN-RRQRDRQAEHKD 511
Y F + R L +L P REL+E TGLT Q++NWF N RR+ D ++ KD
Sbjct: 86 YEFTSEQRGALDQAFLVTPQMDSDGARELSEITGLTVKQINNWFCNQRRKADGRSAEKD 144
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 419 ELAETTGLTTVQVSNWFKNRRQRDRQ 496
EL E TG+ ++ +WF R+ RD++
Sbjct: 198 ELVEKTGMERKKIRDWFSKRKGRDKR 223
>Z68114-11|CAA92154.1| 329|Caenorhabditis elegans Hypothetical
protein F17A2.5 protein.
Length = 329
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHN---PYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKD 511
F + S +L +++L N PYPS K+ LA ++ QVSNWF N+R R ++ K+
Sbjct: 194 FSKTSTEILNEYFLANINHPYPSEEVKQALAMQCNISVAQVSNWFGNKRIRYKKTMAKN 252
>AL033514-1|CAA22081.2| 275|Caenorhabditis elegans Hypothetical
protein Y75B8A.1 protein.
Length = 275
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = +2
Query: 380 YLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSG 517
+L+N Y S +++ ELA+ LT QV WF+NRR +D++ + + SG
Sbjct: 218 FLYNTYVSKQKRWELAKYLHLTERQVKIWFQNRRMKDKKQKQRTSG 263
>AF172092-1|AAD48876.1| 275|Caenorhabditis elegans homeodomain
protein PHP-3 protein.
Length = 275
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = +2
Query: 380 YLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSG 517
+L+N Y S +++ ELA+ LT QV WF+NRR +D++ + + SG
Sbjct: 218 FLYNTYVSKQKRWELAKYLHLTERQVKIWFQNRRMKDKKQKQRTSG 263
>Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical
protein F01D4.6b protein.
Length = 313
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 347 KEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEH 505
K+ VL + + + P PS + +LA TGL+ + WF+NRR ++R+ +H
Sbjct: 217 KQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQVWFQNRRSKERRLKH 269
>Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical
protein F01D4.6a protein.
Length = 321
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 347 KEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEH 505
K+ VL + + + P PS + +LA TGL+ + WF+NRR ++R+ +H
Sbjct: 225 KQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQVWFQNRRSKERRLKH 277
>Z73422-5|CAE54882.1| 323|Caenorhabditis elegans Hypothetical
protein B0564.10b protein.
Length = 323
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHK---DS 514
F + L +W+ N YP + E+A LT +V WFKNRR + R+ E D+
Sbjct: 119 FTSHQLTELENWFSRNRYPDMACREEIAVWISLTEPRVRVWFKNRRAKWRKRERNYVIDN 178
Query: 515 GTGGDKQLDSSTD 553
G G K S D
Sbjct: 179 GQGTTKVTAQSLD 191
>Z73422-4|CAA97770.1| 319|Caenorhabditis elegans Hypothetical
protein B0564.10a protein.
Length = 319
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHK---DS 514
F + L +W+ N YP + E+A LT +V WFKNRR + R+ E D+
Sbjct: 119 FTSHQLTELENWFSRNRYPDMACREEIAVWISLTEPRVRVWFKNRRAKWRKRERNYVIDN 178
Query: 515 GTGGDKQLDSSTD 553
G G K S D
Sbjct: 179 GQGTTKVTAQSLD 191
>U55856-2|AAA98021.1| 197|Caenorhabditis elegans Touch abnormal
protein 1 protein.
Length = 197
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Frame = +2
Query: 341 CFKEKSRSVLRDWYLHN--------PYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQ 496
C + K+R+V D L Y S E+ ELA L+ QV WF+NRR + ++
Sbjct: 118 CSRRKARTVFSDQQLQGLERRFESQRYLSTPERIELANALNLSETQVKTWFQNRRMKHKK 177
Query: 497 AEHKDSGTGGDKQLDSSTDDDSE 565
KD + D D+ D++SE
Sbjct: 178 VVRKDDNSVDD---DNGNDNESE 197
>M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein (
C.elegans mec-3 geneencoding differentiation of the six
touch receptor neurons,complete cds. ).
Length = 313
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 347 KEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEH 505
K+ VL + + + P PS + +LA TGL+ + WF+NRR ++R+ +H
Sbjct: 217 KQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQVWFQNRRSKERRLKH 269
>L37867-1|AAA63155.1| 319|Caenorhabditis elegans homeodomain
protein protein.
Length = 319
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHK---DS 514
F + L +W+ N YP + E+A LT +V WFKNRR + R+ E D+
Sbjct: 119 FTSHQLTELENWFSRNRYPDMACREEIAVWISLTEPRVRVWFKNRRAKWRKRERNYVIDN 178
Query: 515 GTGGDKQLDSSTD 553
G G K S D
Sbjct: 179 GQGTTKVTAQSLD 191
>L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein
protein.
Length = 321
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 347 KEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEH 505
K+ VL + + + P PS + +LA TGL+ + WF+NRR ++R+ +H
Sbjct: 225 KQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQVWFQNRRSKERRLKH 277
>U72348-1|AAB17273.1| 355|Caenorhabditis elegans putative
transcription factor LIM-4 protein.
Length = 355
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTG 523
F E SVL+ ++ + P + ++A TGL+ WF+N R R ++ K G
Sbjct: 246 FAEDQLSVLQTYFNRDSNPDGADLEKIASMTGLSKRVTQVWFQNSRARQKKWHQKSEGDN 305
Query: 524 GDKQLDS 544
GD Q S
Sbjct: 306 GDSQRSS 312
>U39740-5|AAA80428.2| 355|Caenorhabditis elegans Lim domain family
protein 4 protein.
Length = 355
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTG 523
F E SVL+ ++ + P + ++A TGL+ WF+N R R ++ K G
Sbjct: 246 FAEDQLSVLQTYFNRDSNPDGADLEKIASMTGLSKRVTQVWFQNSRARQKKWHQKSEGDN 305
Query: 524 GDKQLDS 544
GD Q S
Sbjct: 306 GDSQRSS 312
>M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein (
C.elegans DNA-bindingprotein (mab5) mRNA, 3' end. ).
Length = 211
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/83 (25%), Positives = 43/83 (51%)
Frame = +2
Query: 320 DGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQA 499
+ + T + L + ++ Y + + ++E++ET LT QV WF+NRR + ++
Sbjct: 127 ESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKK- 185
Query: 500 EHKDSGTGGDKQLDSSTDDDSER 568
E K G + +S+ D+ +E+
Sbjct: 186 EAKGEGGSNESDEESNQDEQNEQ 208
>L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal
protein 5 protein.
Length = 200
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/83 (25%), Positives = 43/83 (51%)
Frame = +2
Query: 320 DGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQA 499
+ + T + L + ++ Y + + ++E++ET LT QV WF+NRR + ++
Sbjct: 116 ESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKK- 174
Query: 500 EHKDSGTGGDKQLDSSTDDDSER 568
E K G + +S+ D+ +E+
Sbjct: 175 EAKGEGGSNESDEESNQDEQNEQ 197
>AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein.
Length = 200
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/83 (25%), Positives = 43/83 (51%)
Frame = +2
Query: 320 DGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQA 499
+ + T + L + ++ Y + + ++E++ET LT QV WF+NRR + ++
Sbjct: 116 ESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKK- 174
Query: 500 EHKDSGTGGDKQLDSSTDDDSER 568
E K G + +S+ D+ +E+
Sbjct: 175 EAKGEGGSNESDEESNQDEQNEQ 197
>AF038608-13|AAC25819.1| 253|Caenorhabditis elegans Hypothetical
protein C09G12.1 protein.
Length = 253
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTG 523
F E +L + +L YP +++ L + T L ++ WFKNRR + R+ + +S
Sbjct: 98 FSENQLELLEEAFLKCQYPDVQQRETLGKQTELAEARIQVWFKNRRAKARKRQRNESTDS 157
Query: 524 GDKQLDSSTDDDSE 565
+S+ + D++
Sbjct: 158 CSTTEESNEEGDAD 171
>Z81085-1|CAB03112.3| 263|Caenorhabditis elegans Hypothetical
protein F46F3.1 protein.
Length = 263
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/75 (32%), Positives = 39/75 (52%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTG 523
F + VL + N Y S ++ LA++ L+ QV WF+N+R + ++ E + G
Sbjct: 105 FSPQQVHVLERKFQINRYLSAADRENLAKSINLSATQVKIWFQNQRYKCKRQEKEKKMDG 164
Query: 524 GDKQLDSSTDDDSER 568
G + DS D DS+R
Sbjct: 165 GCYR-DSDRDTDSDR 178
>Z32680-4|CAA83601.1| 273|Caenorhabditis elegans Hypothetical
protein C28A5.4 protein.
Length = 273
Score = 41.1 bits (92), Expect = 5e-04
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = +2
Query: 263 GAVGKYRVR-RKFPLPRTIWDGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTG 439
G KY V+ +K PRTI++ + K+ ++ YL P ++ LA G
Sbjct: 90 GCEAKYNVKGKKMRKPRTIYNSSQLQMLQKKFQKTQ----YLALP-----DRAALAHELG 140
Query: 440 LTTVQVSNWFKNRRQRDRQAEHKDSGTGGDKQLDSSTDDDSE 565
L+ QV WF+NRR + + K G D D DD E
Sbjct: 141 LSQTQVKIWFQNRRSKQK----KQKGGSSDHASDEEDDDTEE 178
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 41.1 bits (92), Expect = 5e-04
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 365 VLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDS 514
VL D +++ + + K+ELA+ LTT QV +WF RR+ +A K+S
Sbjct: 119 VLDDVFINCQFINEETKKELAKELDLTTTQVKDWFNRRRRHALEAHQKNS 168
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 368 LRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSG 517
L ++ + + + ELAE G+ V +W+ RR R ++A H + G
Sbjct: 552 LEPYFQKHQFVDGAKYNELAEIAGVNPTTVKSWYMRRRLRAQKA-HDEHG 600
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 422 LAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTGGDKQLDSSTDDDSER 568
+ + GLT VSN+F R++ + A+ + + D D DD E+
Sbjct: 628 IGDKIGLTANFVSNYFTIRKRMSKGAKRGERLSDSDDDDDEPEDDGEEK 676
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 347 KEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
KE+ +L + + NP+ + E E A+ V WF +R+R
Sbjct: 291 KEEEDKLLDEQFAKNPFTTGEELTEFAKKLNRPRPFVLKWFWKKRKR 337
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 41.1 bits (92), Expect = 5e-04
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +2
Query: 365 VLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDS 514
VL D +++ + + K+ELA+ LTT QV +WF RR+ +A K+S
Sbjct: 117 VLDDVFINCQFINEETKKELAKELDLTTTQVKDWFNRRRRHALEAHQKNS 166
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 368 LRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSG 517
L ++ + + + ELAE G+ V +W+ RR R ++A H + G
Sbjct: 550 LEPYFQKHQFVDGAKYNELAEIAGVNPTTVKSWYMRRRLRAQKA-HDEHG 598
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 422 LAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTGGDKQLDSSTDDDSER 568
+ + GLT VSN+F R++ + A+ + + D D DD E+
Sbjct: 626 IGDKIGLTANFVSNYFTIRKRMSKGAKRGERLSDSDDDDDEPEDDGEEK 674
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 347 KEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
KE+ +L + + NP+ + E E A+ V WF +R+R
Sbjct: 289 KEEEDKLLDEQFAKNPFTTGEELTEFAKKLNRPRPFVLKWFWKKRKR 335
>AJ312288-1|CAC41972.1| 278|Caenorhabditis elegans putative
transcription factor protein.
Length = 278
Score = 41.1 bits (92), Expect = 5e-04
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = +2
Query: 263 GAVGKYRVR-RKFPLPRTIWDGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTG 439
G KY V+ +K PRTI++ + K+ ++ YL P ++ LA G
Sbjct: 95 GCEAKYNVKGKKMRKPRTIYNSSQLQMLQKKFQKTQ----YLALP-----DRAALAHELG 145
Query: 440 LTTVQVSNWFKNRRQRDRQAEHKDSGTGGDKQLDSSTDDDSE 565
L+ QV WF+NRR + + K G D D DD E
Sbjct: 146 LSQTQVKIWFQNRRSKQK----KQKGGSSDHASDEEDDDTEE 183
>AL033514-3|CAC70124.1| 218|Caenorhabditis elegans Hypothetical
protein Y75B8A.2b protein.
Length = 218
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +2
Query: 320 DGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQA 499
DG++ +K+ S L Y N Y + + + EL+ L QV WF+NRR +D++
Sbjct: 136 DGKKKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQLMLDEKQVKVWFQNRRMKDKKL 195
Query: 500 EHKDSG 517
+ SG
Sbjct: 196 RQRHSG 201
>AF172090-1|AAD48874.1| 218|Caenorhabditis elegans homeodomain
protein NOB-1A protein.
Length = 218
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +2
Query: 320 DGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQA 499
DG++ +K+ S L Y N Y + + + EL+ L QV WF+NRR +D++
Sbjct: 136 DGKKKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQLMLDEKQVKVWFQNRRMKDKKL 195
Query: 500 EHKDSG 517
+ SG
Sbjct: 196 RQRHSG 201
>U73946-1|AAB18328.1| 452|Caenorhabditis elegans CeLIM-7 protein.
Length = 452
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 350 EKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAE 502
E +LRD Y N P K L E TGL+ + WF+N+R +D++ +
Sbjct: 274 ENQLKILRDCYSINSRPDATLKERLVEMTGLSARVIRVWFQNKRCKDKKRQ 324
>AF067210-1|AAC16985.1| 452|Caenorhabditis elegans Lim domain
family protein 7 protein.
Length = 452
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 350 EKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAE 502
E +LRD Y N P K L E TGL+ + WF+N+R +D++ +
Sbjct: 274 ENQLKILRDCYSINSRPDATLKERLVEMTGLSARVIRVWFQNKRCKDKKRQ 324
>L19249-1|AAC37167.1| 303|Caenorhabditis elegans homeobox protein
protein.
Length = 303
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 368 LRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDR--QAEHKDSGTGGDKQLD 541
L D + Y E+ LA+ GL+ QV WF+NRR + R Q E + S T +K +
Sbjct: 224 LEDMFKGQMYVVGAERENLAQRLGLSPSQVRIWFQNRRSKHRRKQQEEQQSTTLEEKSEE 283
Query: 542 SSTDDDSE 565
D++ +
Sbjct: 284 IGKDEEED 291
>L14429-3|AAA28218.1| 305|Caenorhabditis elegans C.elegans homeobox
protein 23 protein.
Length = 305
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 368 LRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDR--QAEHKDSGTGGDKQLD 541
L D + Y E+ LA+ GL+ QV WF+NRR + R Q E + S T +K +
Sbjct: 226 LEDMFKGQMYVVGAERENLAQRLGLSPSQVRIWFQNRRSKHRRKQQEEQQSTTLEEKSEE 285
Query: 542 SSTDDDSE 565
D++ +
Sbjct: 286 IGKDEEED 293
>Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical
protein ZC247.3 protein.
Length = 405
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +2
Query: 347 KEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTGG 526
K K L++ + P P+ + +LA TGL + WF+NRR ++R+ K GG
Sbjct: 249 KAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERRM--KQLRFGG 306
Query: 527 DKQLDSSTDDD 559
+Q DD
Sbjct: 307 YRQSRRPRRDD 317
>Z46794-6|CAA86776.1| 416|Caenorhabditis elegans Hypothetical
protein R06F6.6 protein.
Length = 416
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRR---QRDRQAEHKDS 514
F + + L Y+ + Y + ++ LA++ L+ QV WF+NRR +RDR++E+ +
Sbjct: 137 FSPEQATRLEAEYIGDSYMAREKRHLLAQSLKLSENQVKTWFQNRRAKDKRDRKSENASN 196
Query: 515 GTGGDKQLDSSTDDDSE 565
T ++ S S+
Sbjct: 197 HTSNSRRSSPSRKSSSD 213
>X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein
protein.
Length = 382
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +2
Query: 347 KEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTGG 526
K K L++ + P P+ + +LA TGL + WF+NRR ++R+ K GG
Sbjct: 226 KAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERRM--KQLRFGG 283
Query: 527 DKQLDSSTDDD 559
+Q DD
Sbjct: 284 YRQSRRPRRDD 294
>AY246429-1|AAO91836.1| 209|Caenorhabditis elegans homeodomain
protein CEH-2 protein.
Length = 209
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 389 NPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTGGDKQLDSSTDDDSE 565
N Y E+++LA LT QV WF+NRR + ++ + S D +DD +
Sbjct: 148 NHYVVGNERKQLAAKLSLTETQVKVWFQNRRTKHKRVRLEGSDPNAPMSNDEDDEDDKK 206
>AY246428-1|AAO91835.1| 209|Caenorhabditis elegans homeodomain
protein CEH-2 protein.
Length = 209
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 389 NPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTGGDKQLDSSTDDDSE 565
N Y E+++LA LT QV WF+NRR + ++ + S D +DD +
Sbjct: 148 NHYVVGNERKQLAAKLSLTETQVKVWFQNRRTKHKRVRLEGSDPNAPMSNDEDDEDDKK 206
>AF003137-4|AAB93639.2| 209|Caenorhabditis elegans C.elegans
homeobox protein 2 protein.
Length = 209
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 389 NPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTGGDKQLDSSTDDDSE 565
N Y E+++LA LT QV WF+NRR + ++ + S D +DD +
Sbjct: 148 NHYVVGNERKQLAAKLSLTETQVKVWFQNRRTKHKRVRLEGSDPNAPMSNDEDDEDDKK 206
>U56860-2|AAA98706.3| 225|Caenorhabditis elegans Defective pharynx
development protein2 protein.
Length = 225
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQ 496
F + L + + Y SP+E+++LA++ L+ QV WF+NRR + R+
Sbjct: 142 FTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQNRRAKWRR 192
>AY766389-1|AAV34757.1| 170|Caenorhabditis elegans PHA-2 protein.
Length = 170
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQ 496
F + L + + Y SP+E+++LA++ L+ QV WF+NRR + R+
Sbjct: 87 FTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQNRRAKWRR 137
>AL031620-3|CAA20928.1| 310|Caenorhabditis elegans Hypothetical
protein C18B12.3 protein.
Length = 310
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHK 508
F E + L D + + YP + K+ +A+ + +++ WF+NRR + R+ EH+
Sbjct: 187 FTELQSTFLEDSFKESHYPDHKAKKYMADFLKIPEDRITVWFQNRRAKWRRKEHR 241
>U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plus
homeodomain, axonguidance protein 1 protein.
Length = 596
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 362 SVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDS 514
+VL++ + NP+PS E +AE G+ V WF+N R ++R++ S
Sbjct: 236 AVLQNHFKRNPFPSKYELSAVAEQIGVNKRVVQVWFQNTRAKERRSNRLPS 286
>U64600-4|AAK39201.1| 299|Caenorhabditis elegans C.elegans homeobox
protein 30 protein.
Length = 299
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQR-DRQA 499
F +K L + + Y S +++ +LA GLT QV W++NRR + RQA
Sbjct: 164 FTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWKRQA 216
>U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeobox
protein 14 protein.
Length = 351
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +2
Query: 353 KSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTGGDK 532
KS L+ Y + P+ + +LA TGL V WF+NRR ++++ + KD+G
Sbjct: 190 KSLETLKQAYQTSSKPARHVREQLASETGLDMRVVQVWFQNRRAKEKRLK-KDAGRRWKS 248
Query: 533 QLDSSTDDDS 562
+ +D +S
Sbjct: 249 SNRAESDSNS 258
>AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 362 SVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDS 514
+VL++ + NP+PS E +AE G+ V WF+N R ++R++ S
Sbjct: 236 AVLQNHFKRNPFPSKYELSAVAEQIGVNKRVVQVWFQNTRAKERRSNRLPS 286
>AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 362 SVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDS 514
+VL++ + NP+PS E +AE G+ V WF+N R ++R++ S
Sbjct: 236 AVLQNHFKRNPFPSKYELSAVAEQIGVNKRVVQVWFQNTRAKERRSNRLPS 286
>AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox
protein CEH-14 protein.
Length = 351
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +2
Query: 353 KSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTGGDK 532
KS L+ Y + P+ + +LA TGL V WF+NRR ++++ + KD+G
Sbjct: 190 KSLETLKQAYQTSSKPARHVREQLASETGLDMRVVQVWFQNRRAKEKRLK-KDAGRRWKS 248
Query: 533 QLDSSTDDDS 562
+ +D +S
Sbjct: 249 SNRAESDSNS 258
>Z77133-4|CAB00867.3| 232|Caenorhabditis elegans Hypothetical
protein K03A11.3 protein.
Length = 232
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
F + + L + + Y + E+ ELA+ GLT QV WF+NRR +
Sbjct: 142 FTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQNRRYK 189
>U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain family
protein 6 protein.
Length = 287
Score = 37.5 bits (83), Expect = 0.007
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 269 VGKYRVRRKFPL-PRTIWDGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLT 445
V + + RK P PRTI + ++ R + + + PS + + +LA TGL+
Sbjct: 153 VVRSEIHRKTPKRPRTILNAQQ---------RRQFKTAFERSSKPSRKVREQLANETGLS 203
Query: 446 TVQVSNWFKNRRQRDRQAEHKDSGTG 523
V WF+N+R + ++ KDS +G
Sbjct: 204 VRVVQVWFQNQRAKIKKLNKKDSDSG 229
>L15201-5|AAA27943.2| 219|Caenorhabditis elegans Egg laying
defective protein 5,isoform a protein.
Length = 219
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 305 PRTIWDGEETS----YCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFK 472
P T W +S ++ SVL + + Y S +++ EL T LT Q+ WF+
Sbjct: 98 PNTAWPNYASSKKGRQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKIWFQ 157
Query: 473 NRRQRDRQAEHK 508
NRR + ++ + +
Sbjct: 158 NRRMKAKKEKQR 169
>AY205144-1|AAO46042.2| 201|Caenorhabditis elegans NK-2 family
homeodomain proteinCEH-28 protein.
Length = 201
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
F + + L + + Y + E+ ELA+ GLT QV WF+NRR +
Sbjct: 111 FTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQNRRYK 158
>Z81036-4|CAB02740.2| 134|Caenorhabditis elegans Hypothetical
protein C16C2.1 protein.
Length = 134
Score = 37.1 bits (82), Expect = 0.009
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKD 511
F ++ L + + + Y S + +LAE+ GL+ QV WF+NRR + ++ + +D
Sbjct: 42 FTDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQKKIDSRD 97
>U49944-3|AAM51525.1| 341|Caenorhabditis elegans Mesodermal lineage
specificationprotein 2 protein.
Length = 341
Score = 36.7 bits (81), Expect = 0.012
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 326 EETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQR-DRQAE 502
++T F S L + Y S +E+ LA+ LT QV WF+NRR + RQA+
Sbjct: 202 KKTRTVFSRSQVSQLEMMFECKRYLSSQERSNLAQKLHLTETQVKIWFQNRRNKFKRQAQ 261
Query: 503 HKDS 514
D+
Sbjct: 262 TDDT 265
>U41545-3|ABN43093.1| 152|Caenorhabditis elegans Hypothetical
protein C02F12.10 protein.
Length = 152
Score = 36.7 bits (81), Expect = 0.012
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQ 496
F + ++L + N Y + ELA+T LT QV WF+NRR + R+
Sbjct: 48 FTSEQVTLLELEFAKNEYICKDRRGELAQTIELTECQVKTWFQNRRTKKRR 98
>Z48783-8|CAA88702.2| 308|Caenorhabditis elegans Hypothetical
protein F27E5.2 protein.
Length = 308
Score = 36.3 bits (80), Expect = 0.015
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQ 496
F + VL + + + YP + +++ TGL+ ++ WF NRR R R+
Sbjct: 194 FTAEQLDVLENAFRADTYPHANARESISKETGLSEEKIMTWFSNRRARCRK 244
>Z48582-7|CAA88468.2| 308|Caenorhabditis elegans Hypothetical
protein F27E5.2 protein.
Length = 308
Score = 36.3 bits (80), Expect = 0.015
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQ 496
F + VL + + + YP + +++ TGL+ ++ WF NRR R R+
Sbjct: 194 FTAEQLDVLENAFRADTYPHANARESISKETGLSEEKIMTWFSNRRARCRK 244
>Z77136-3|CAB00886.1| 252|Caenorhabditis elegans Hypothetical
protein ZC376.4 protein.
Length = 252
Score = 35.9 bits (79), Expect = 0.020
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTGGDKQLDSS 547
YPS + E A+T + ++ WF NRR RDR+ + GD DSS
Sbjct: 36 YPSKEQYAEWAQTYQIQQRRIRKWFDNRRTRDRERRKRK----GDDNEDSS 82
>X17075-1|CAA34927.1| 75|Caenorhabditis elegans ceh-11 protein.
Length = 75
Score = 35.9 bits (79), Expect = 0.020
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHK 508
++ SVL + + Y S +++ EL T LT Q+ WF+NRR + ++ + +
Sbjct: 9 YQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKIWFQNRRMKAKKEKQR 63
>L19247-1|AAC37166.1| 223|Caenorhabditis elegans homeobox protein
protein.
Length = 223
Score = 35.9 bits (79), Expect = 0.020
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHK 508
++ SVL + + Y S +++ EL T LT Q+ WF+NRR + ++ + +
Sbjct: 119 YQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKIWFQNRRMKAKKEKQR 173
>L15201-6|AAP82660.1| 222|Caenorhabditis elegans Egg laying
defective protein 5,isoform c protein.
Length = 222
Score = 35.9 bits (79), Expect = 0.020
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHK 508
++ SVL + + Y S +++ EL T LT Q+ WF+NRR + ++ + +
Sbjct: 118 YQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKIWFQNRRMKAKKEKQR 172
>L15201-4|AAN84878.1| 223|Caenorhabditis elegans Egg laying
defective protein 5,isoform b protein.
Length = 223
Score = 35.9 bits (79), Expect = 0.020
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHK 508
++ SVL + + Y S +++ EL T LT Q+ WF+NRR + ++ + +
Sbjct: 119 YQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKIWFQNRRMKAKKEKQR 173
>AF025454-2|AAC71153.2| 186|Caenorhabditis elegans Hypothetical
protein F34D6.2 protein.
Length = 186
Score = 35.5 bits (78), Expect = 0.027
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWF-KNRRQR 487
+ + +VLR+ + H + S +LA +GLT QVS WF K RR R
Sbjct: 80 YTPEQHAVLREGFEHCSWLSKSTLNKLASESGLTRTQVSTWFSKERRVR 128
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 350 EKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQ 496
+ S +VLRD+Y + K +L TG++ Q+ + R+ D++
Sbjct: 22 KNSSNVLRDYYDMGNFKISGNKEKLVALTGMSDRQIELHLQKYRREDKK 70
>Z46241-10|CAH19082.1| 268|Caenorhabditis elegans Hypothetical
protein C38D4.6b protein.
Length = 268
Score = 35.1 bits (77), Expect = 0.036
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHK 508
+ + R L + +P+ + K +L+ LT Q+ WF+NRR +DR+ + K
Sbjct: 211 YSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQNRRAKDRRDKQK 265
>Z46241-9|CAA86322.2| 270|Caenorhabditis elegans Hypothetical
protein C38D4.6a protein.
Length = 270
Score = 35.1 bits (77), Expect = 0.036
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHK 508
+ + R L + +P+ + K +L+ LT Q+ WF+NRR +DR+ + K
Sbjct: 213 YSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQNRRAKDRRDKQK 267
>X62782-1|CAA44619.1| 208|Caenorhabditis elegans pal-1 protein.
Length = 208
Score = 35.1 bits (77), Expect = 0.036
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHK 508
+ + R L + +P+ + K +L+ LT Q+ WF+NRR +DR+ + K
Sbjct: 151 YSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQNRRAKDRRDKQK 205
>X57140-1|CAA40419.1| 71|Caenorhabditis elegans ceh-3 protein.
Length = 71
Score = 35.1 bits (77), Expect = 0.036
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHK 508
+ + R L + +P+ + K +L+ LT Q+ WF+NRR +DR+ + K
Sbjct: 16 YSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQNRRAKDRRDKQK 70
>Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical
protein C37E2.5 protein.
Length = 278
Score = 34.7 bits (76), Expect = 0.047
Identities = 18/80 (22%), Positives = 34/80 (42%)
Frame = +2
Query: 326 EETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEH 505
E T+Y + +L + YP + +A+ L ++ WFKNRR + R E
Sbjct: 44 ERTTY--SRQQLEILETLFNETQYPDVFARERVADQIRLQESRIQVWFKNRRAKYRLQEK 101
Query: 506 KDSGTGGDKQLDSSTDDDSE 565
+ +K + ++D +
Sbjct: 102 QKPKRSNEKSQEHKSEDQQQ 121
>AL132853-1|CAB60440.1| 234|Caenorhabditis elegans Hypothetical
protein Y80D3A.3 protein.
Length = 234
Score = 34.3 bits (75), Expect = 0.063
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 410 EKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTGGDKQLDSSTDDDSE 565
E+R+L GL+ Q+ WF+NRR + R+ ++K +Q S+ ++ E
Sbjct: 176 ERRKLGAVIGLSPEQIKIWFQNRRFKLRKEKYKQIKQDAVQQQKSAKEEAEE 227
>AL132858-4|CAB60479.2| 338|Caenorhabditis elegans Hypothetical
protein Y113G7A.6b protein.
Length = 338
Score = 33.9 bits (74), Expect = 0.083
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQ 496
F +L +++ YP + ++A L +V WFKNRR + RQ
Sbjct: 153 FTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAKARQ 203
>AL132858-3|CAB60478.2| 391|Caenorhabditis elegans Hypothetical
protein Y113G7A.6a protein.
Length = 391
Score = 33.9 bits (74), Expect = 0.083
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQ 496
F +L +++ YP + ++A L +V WFKNRR + RQ
Sbjct: 206 FTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAKARQ 256
>AF381629-1|AAL12002.1| 223|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 223
Score = 33.9 bits (74), Expect = 0.083
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQ 496
F +L +++ YP + ++A L +V WFKNRR + RQ
Sbjct: 169 FTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAKARQ 219
>AF381628-1|AAL12001.1| 372|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 372
Score = 33.9 bits (74), Expect = 0.083
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQ 496
F +L +++ YP + ++A L +V WFKNRR + RQ
Sbjct: 187 FTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAKARQ 237
>AF381627-1|AAL12000.1| 332|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 332
Score = 33.9 bits (74), Expect = 0.083
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQ 496
F +L +++ YP + ++A L +V WFKNRR + RQ
Sbjct: 147 FTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAKARQ 197
>Z49908-6|CAA90100.3| 327|Caenorhabditis elegans Hypothetical
protein C07E3.6 protein.
Length = 327
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/61 (21%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYP--SPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSG 517
+ + ++L +Y +P PR++ + +T + ++ WF+NRR++D+ +++
Sbjct: 256 YSTQELNILEKYYEEDPNACADPRKRETMCKTLSIDYHRLKVWFQNRRRKDKVRSQEEAA 315
Query: 518 T 520
T
Sbjct: 316 T 316
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 365 VLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDS 514
VLR ++ N PS + +E+++ L + +WF+N ++RQ + KDS
Sbjct: 877 VLRQYFNINNSPSEAQIKEMSQKASLPEKVIKHWFRNTLFKERQRD-KDS 925
>AC024847-9|AAR30201.1| 147|Caenorhabditis elegans C.elegans
homeobox protein 9 protein.
Length = 147
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTG 523
Y S ++ ELA+ +T QV WF+NRR + ++ E + +G
Sbjct: 94 YLSSSDRSELAKRLDVTETQVKIWFQNRRTKWKKIESEKERSG 136
>Z68008-6|CAA92001.1| 362|Caenorhabditis elegans Hypothetical
protein R08B4.2 protein.
Length = 362
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDS 514
YP + ELA LT +V WF+NRR + R+ E +
Sbjct: 141 YPDVFTREELATRVQLTEARVQVWFQNRRAKYRKQERSST 180
>Z70780-17|CAA94830.3| 264|Caenorhabditis elegans Hypothetical
protein F58E6.10 protein.
Length = 264
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAE 502
YP + ELA T L ++ WF+NRR + R+ E
Sbjct: 109 YPDIYVREELARITKLNEARIQVWFQNRRAKHRKHE 144
>Z70754-11|CAA94780.3| 264|Caenorhabditis elegans Hypothetical
protein F58E6.10 protein.
Length = 264
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAE 502
YP + ELA T L ++ WF+NRR + R+ E
Sbjct: 109 YPDIYVREELARITKLNEARIQVWFQNRRAKHRKHE 144
>U39648-4|AAK39290.1| 220|Caenorhabditis elegans Hypothetical
protein T13C5.4 protein.
Length = 220
Score = 32.7 bits (71), Expect = 0.19
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 380 YLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSG 517
+ N YP + +LA L +V WF+NRR + R+ E K +G
Sbjct: 63 FAENQYPDTMSREKLANKIQLHEERVQIWFQNRRAKYRR-EQKQTG 107
>U28733-1|AAA68302.2| 982|Caenorhabditis elegans Patched related
family protein 6 protein.
Length = 982
Score = 32.7 bits (71), Expect = 0.19
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 204 CNFAWLCALKLCDSSSLYSSLKFPRWKATMAFA 106
C F W+ L L D+ LY+ + P WK F+
Sbjct: 44 CGFYWIKELTLLDARKLYTPVSAPSWKEEQVFS 76
>Z82279-3|CAD62039.1| 106|Caenorhabditis elegans Hypothetical
protein R03C1.3b protein.
Length = 106
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDS-----GTGGDK 532
Y + ++ +LA+ ++ QV WF+NRR + R+ E D+ G GDK
Sbjct: 43 YLAGADRAQLAQELNMSESQVKVWFQNRRTKWRKKEAADNALVKRGASGDK 93
>Z82279-2|CAB05260.2| 256|Caenorhabditis elegans Hypothetical
protein R03C1.3a protein.
Length = 256
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDS-----GTGGDK 532
Y + ++ +LA+ ++ QV WF+NRR + R+ E D+ G GDK
Sbjct: 193 YLAGADRAQLAQELNMSESQVKVWFQNRRTKWRKKEAADNALVKRGASGDK 243
>Z81143-3|CAB03519.2| 276|Caenorhabditis elegans Hypothetical
protein ZK265.4 protein.
Length = 276
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKD 511
YP + LA L V+V WF+NRR + R+ E +D
Sbjct: 84 YPDVYARETLAAKVQLPEVRVQVWFQNRRAKFRRQEKQD 122
>Z11795-1|CAA77838.1| 130|Caenorhabditis elegans pceh16-1 protein
protein.
Length = 130
Score = 32.3 bits (70), Expect = 0.25
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
Y S ++ +L++T LT Q+ WF+NRR +
Sbjct: 49 YLSVNKRIQLSQTLNLTETQIKTWFQNRRTK 79
>U40933-7|AAA81676.4| 122|Caenorhabditis elegans C.elegans homeobox
protein 19,isoform a protein.
Length = 122
Score = 32.3 bits (70), Expect = 0.25
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
Y S ++ +L++T LT Q+ WF+NRR +
Sbjct: 41 YLSVNKRIQLSQTLNLTETQIKTWFQNRRTK 71
>U40933-6|AAQ23123.1| 199|Caenorhabditis elegans C.elegans homeobox
protein 19,isoform b protein.
Length = 199
Score = 32.3 bits (70), Expect = 0.25
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
Y S ++ +L++T LT Q+ WF+NRR +
Sbjct: 118 YLSVNKRIQLSQTLNLTETQIKTWFQNRRTK 148
>AY151210-1|AAN72827.1| 106|Caenorhabditis elegans COG-1B protein.
Length = 106
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDS-----GTGGDK 532
Y + ++ +LA+ ++ QV WF+NRR + R+ E D+ G GDK
Sbjct: 43 YLAGADRAQLAQELNMSESQVKVWFQNRRTKWRKKEAADNALVKRGASGDK 93
>AY151209-1|AAN72826.1| 256|Caenorhabditis elegans COG-1A protein.
Length = 256
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDS-----GTGGDK 532
Y + ++ +LA+ ++ QV WF+NRR + R+ E D+ G GDK
Sbjct: 193 YLAGADRAQLAQELNMSESQVKVWFQNRRTKWRKKEAADNALVKRGASGDK 243
>Z66494-8|CAA91264.1| 84|Caenorhabditis elegans Hypothetical
protein C34C6.8 protein.
Length = 84
Score = 31.9 bits (69), Expect = 0.33
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 365 VLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHK 508
+L ++ + Y E+ LA L QV WF+NRR R R+ +K
Sbjct: 37 LLEMYFAQSQYVGCDERERLARILSLDEYQVKIWFQNRRIRMRREANK 84
>Z11794-1|CAA77837.1| 66|Caenorhabditis elegans ceh16-1 protein
protein.
Length = 66
Score = 31.9 bits (69), Expect = 0.33
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRR 481
Y S ++ +L++T LT Q+ WF+NRR
Sbjct: 38 YLSVNKRIQLSQTLNLTETQIKTWFQNRR 66
>X52811-1|CAB57217.1| 60|Caenorhabditis elegans protein (
Caenorhabditis elegansceh-9 gene, unknown homeobox. ).
Length = 60
Score = 31.9 bits (69), Expect = 0.33
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAE 502
Y S ++ ELA+ +T QV WF+NRR + ++ E
Sbjct: 25 YLSSSDRSELAKRLDVTETQVKIWFQNRRTKWKKIE 60
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 31.9 bits (69), Expect = 0.33
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = +3
Query: 303 SPERYGTERRPLTVLRKSPDPSSATGISTTRILRHEKRESWPKRPD*PQYKYRIGSRTAD 482
SPE+ + + T KSP+ S+A + + +S ++P P K + AD
Sbjct: 1726 SPEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPVKMAD 1785
Query: 483 RETDKPSIKIAAPEAI 530
E P+ K +PE +
Sbjct: 1786 DEVKSPTKKEKSPEKV 1801
>L19639-1|AAC37168.1| 253|Caenorhabditis elegans homeobox protein
protein.
Length = 253
Score = 31.9 bits (69), Expect = 0.33
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +2
Query: 371 RDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKD 511
++++ H Y + + + E+A + LT QV WF+NRR + ++ E+KD
Sbjct: 182 KEFHTHK-YLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKK-ENKD 226
>L19248-1|AAB04137.1| 253|Caenorhabditis elegans homeobox protein
protein.
Length = 253
Score = 31.9 bits (69), Expect = 0.33
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +2
Query: 371 RDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKD 511
++++ H Y + + + E+A + LT QV WF+NRR + ++ E+KD
Sbjct: 182 KEFHTHK-YLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKK-ENKD 226
>AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein.
Length = 237
Score = 31.9 bits (69), Expect = 0.33
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 332 TSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAE 502
TS KE RS + YP + E+A LT +V WF+NRR + R+ E
Sbjct: 157 TSGQLKELERS-----FCETHYPDIYTREEIAMRIDLTEARVQVWFQNRRAKYRKQE 208
>AF091459-1|AAC36745.1| 84|Caenorhabditis elegans homeodomain
protein CEH-7 protein.
Length = 84
Score = 31.9 bits (69), Expect = 0.33
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 365 VLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHK 508
+L ++ + Y E+ LA L QV WF+NRR R R+ +K
Sbjct: 37 LLEMYFAQSQYVGCDERERLARILSLDEYQVKIWFQNRRIRMRREANK 84
>AF039720-2|AAB96698.1| 180|Caenorhabditis elegans C.elegans
homeobox protein 12 protein.
Length = 180
Score = 31.9 bits (69), Expect = 0.33
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQ 496
F + L + N Y S + +LA+ L+ Q+ WF+NRR ++++
Sbjct: 117 FSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNKR 167
>AF016684-15|AAB66214.1| 543|Caenorhabditis elegans Hypothetical
protein F45C12.15 protein.
Length = 543
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +2
Query: 359 RSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTGGDKQL 538
+ L + + NP P ++++ GLT QV+ WF R + +S + D++L
Sbjct: 95 KKALFEHFEKNPKPESESLQKISAQLGLTQQQVTGWFNRRNGTYLISGPHNSVSKADRKL 154
Query: 539 DSSTDDDSER 568
T ER
Sbjct: 155 SHMTKKLGER 164
>AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans
homeobox protein 17 protein.
Length = 237
Score = 31.9 bits (69), Expect = 0.33
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 332 TSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAE 502
TS KE RS + YP + E+A LT +V WF+NRR + R+ E
Sbjct: 157 TSGQLKELERS-----FCETHYPDIYTREEIAMRIDLTEARVQVWFQNRRAKYRKQE 208
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 31.9 bits (69), Expect = 0.33
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = +3
Query: 303 SPERYGTERRPLTVLRKSPDPSSATGISTTRILRHEKRESWPKRPD*PQYKYRIGSRTAD 482
SPE+ + + T KSP+ S+A + + +S ++P P K + AD
Sbjct: 1726 SPEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPVKMAD 1785
Query: 483 RETDKPSIKIAAPEAI 530
E P+ K +PE +
Sbjct: 1786 DEVKSPTKKEKSPEKV 1801
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 31.9 bits (69), Expect = 0.33
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = +3
Query: 303 SPERYGTERRPLTVLRKSPDPSSATGISTTRILRHEKRESWPKRPD*PQYKYRIGSRTAD 482
SPE+ + + T KSP+ S+A + + +S ++P P K + AD
Sbjct: 1726 SPEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPVKMAD 1785
Query: 483 RETDKPSIKIAAPEAI 530
E P+ K +PE +
Sbjct: 1786 DEVKSPTKKEKSPEKV 1801
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 31.9 bits (69), Expect = 0.33
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = +3
Query: 303 SPERYGTERRPLTVLRKSPDPSSATGISTTRILRHEKRESWPKRPD*PQYKYRIGSRTAD 482
SPE+ + + T KSP+ S+A + + +S ++P P K + AD
Sbjct: 1726 SPEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPVKMAD 1785
Query: 483 RETDKPSIKIAAPEAI 530
E P+ K +PE +
Sbjct: 1786 DEVKSPTKKEKSPEKV 1801
>AC006605-9|AAK85445.1| 253|Caenorhabditis elegans Abnormal cell
lineage protein 39 protein.
Length = 253
Score = 31.9 bits (69), Expect = 0.33
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +2
Query: 371 RDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKD 511
++++ H Y + + + E+A + LT QV WF+NRR + ++ E+KD
Sbjct: 182 KEFHTHK-YLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKK-ENKD 226
>AL590342-2|CAC35859.3| 685|Caenorhabditis elegans Hypothetical
protein Y66A7A.5 protein.
Length = 685
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +2
Query: 326 EETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAE 502
++T F L +L NP P+ + LA+ +V NWFK ++ + + E
Sbjct: 524 DQTWRTFSVNDEKRLHSTFLQNPQPTDEQYCYLAKELRAPVKEVMNWFKLKQMNEEREE 582
>AL032622-4|CAA21499.1| 738|Caenorhabditis elegans Y66A7A.5
protein.
Length = 738
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +2
Query: 326 EETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAE 502
++T F L +L NP P+ + LA+ +V NWFK ++ + + E
Sbjct: 577 DQTWRTFSVNDEKRLHSTFLQNPQPTDEQYCYLAKELRAPVKEVMNWFKLKQMNEEREE 635
>Z48621-10|CAA88539.1| 225|Caenorhabditis elegans Hypothetical
protein R07B1.1 protein.
Length = 225
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKD 511
Y S E+ E + + LT QV WF+NRR + ++ + +
Sbjct: 153 YLSIAERAEFSASLQLTETQVKIWFQNRRAKSKRLQEAE 191
>U39740-3|AAA80426.2| 542|Caenorhabditis elegans C.elegans homeobox
protein 18,isoform a protein.
Length = 542
Score = 31.1 bits (67), Expect = 0.58
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 359 RSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSG 517
R+ L ++ NP P + ++A + L V WF NRRQ+ R+ + G
Sbjct: 433 RNALDTFFALNPRPDHDKMTDIANSLELDRDVVRVWFCNRRQKMRRVDEPIEG 485
>U39740-2|AAM69077.1| 540|Caenorhabditis elegans C.elegans homeobox
protein 18,isoform b protein.
Length = 540
Score = 31.1 bits (67), Expect = 0.58
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 359 RSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSG 517
R+ L ++ NP P + ++A + L V WF NRRQ+ R+ + G
Sbjct: 431 RNALDTFFALNPRPDHDKMTDIANSLELDRDVVRVWFCNRRQKMRRVDEPIEG 483
>U16367-1|AAA52203.1| 542|Caenorhabditis elegans CEH-18 protein.
Length = 542
Score = 31.1 bits (67), Expect = 0.58
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 359 RSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSG 517
R+ L ++ NP P + ++A + L V WF NRRQ+ R+ + G
Sbjct: 433 RNALDTFFALNPRPDHDKMTDIANSLELDRDVVRVWFCNRRQKMRRVDEPIEG 485
>AF286218-1|AAF88063.1| 225|Caenorhabditis elegans VAB-15 protein.
Length = 225
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKD 511
Y S E+ E + + LT QV WF+NRR + ++ + +
Sbjct: 153 YLSIAERAEFSASLQLTETQVKIWFQNRRAKSKRLQEAE 191
>Z81046-3|CAB02821.1| 257|Caenorhabditis elegans Hypothetical
protein C37E2.4 protein.
Length = 257
Score = 30.7 bits (66), Expect = 0.77
Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Frame = +2
Query: 326 EETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTT--VQVSN-WFKNRRQRDRQ 496
E TS F L + YP + LA+ L VQV WFKNRR +DR
Sbjct: 58 ERTS--FNRGQLDQLEKVFRETQYPDVHRREALAKAINLPDGRVQVITVWFKNRRAKDRN 115
Query: 497 AEHKDSGTGGDKQLDSS 547
+ D G SS
Sbjct: 116 NKKMDGVHPGSTSSRSS 132
>L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeobox
protein 16 protein.
Length = 187
Score = 30.7 bits (66), Expect = 0.77
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 368 LRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
L+ + + Y + + ++ELA GL Q+ WF+N+R +
Sbjct: 102 LKTEFRESRYLTEKRRQELAHELGLNESQIKIWFQNKRAK 141
>AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene 16
protein.
Length = 187
Score = 30.7 bits (66), Expect = 0.77
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 368 LRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
L+ + + Y + + ++ELA GL Q+ WF+N+R +
Sbjct: 102 LKTEFRESRYLTEKRRQELAHELGLNESQIKIWFQNKRAK 141
>X17077-1|CAA34929.1| 202|Caenorhabditis elegans ceh-13 homeodomain
protein protein.
Length = 202
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAE 502
Y + + E+A L QV WF+NRR ++++ E
Sbjct: 138 YVNRTRRTEIASNLKLQEAQVKIWFQNRRMKEKKRE 173
>AC006679-1|AAK84466.1| 202|Caenorhabditis elegans C.elegans
homeobox protein 13 protein.
Length = 202
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAE 502
Y + + E+A L QV WF+NRR ++++ E
Sbjct: 138 YVNRTRRTEIASNLKLQEAQVKIWFQNRRMKEKKRE 173
>Z73428-3|CAA97809.1| 247|Caenorhabditis elegans Hypothetical
protein M142.4 protein.
Length = 247
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +2
Query: 320 DGEETSY--CFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDR 493
DG+ Y F + L + Y S + + ELA L + WF+NRR +D+
Sbjct: 65 DGQMRRYRTAFSREQIGRLEREFAKENYVSRKTRGELAAELNLPEGTIKVWFQNRRMKDK 124
Query: 494 Q 496
+
Sbjct: 125 R 125
>Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical
protein R07B5.6 protein.
Length = 328
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 344 FKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSN 463
F +V+ W L+ +P R KR ++++T +TT+ N
Sbjct: 284 FGNDCETVMMPWILYMTHPMFRRKRTISQSTAVTTIPRMN 323
>Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical
protein F14F3.1c protein.
Length = 296
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +2
Query: 266 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLT 445
A + R++RK RT + + KE R+ H YP + LA+ L
Sbjct: 48 AAARMRLKRKLQRNRTSFTQVQIESLEKEFERT-------H--YPDVFARERLAQKIQLP 98
Query: 446 TVQVSNWFKNRR---QRDRQAEHKDSGTGGDKQLDSST 550
++ WF NRR +R+ + +K S D L + T
Sbjct: 99 EARIQVWFSNRRAKWRREEKMRNKRSSGTMDSSLSNGT 136
>Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical
protein F14F3.1b protein.
Length = 269
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +2
Query: 266 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLT 445
A + R++RK RT + + KE R+ H YP + LA+ L
Sbjct: 21 AAARMRLKRKLQRNRTSFTQVQIESLEKEFERT-------H--YPDVFARERLAQKIQLP 71
Query: 446 TVQVSNWFKNRR---QRDRQAEHKDSGTGGDKQLDSST 550
++ WF NRR +R+ + +K S D L + T
Sbjct: 72 EARIQVWFSNRRAKWRREEKMRNKRSSGTMDSSLSNGT 109
>Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical
protein F14F3.1a protein.
Length = 455
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +2
Query: 266 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLT 445
A + R++RK RT + + KE R+ H YP + LA+ L
Sbjct: 207 AAARMRLKRKLQRNRTSFTQVQIESLEKEFERT-------H--YPDVFARERLAQKIQLP 257
Query: 446 TVQVSNWFKNRR---QRDRQAEHKDSGTGGDKQLDSST 550
++ WF NRR +R+ + +K S D L + T
Sbjct: 258 EARIQVWFSNRRAKWRREEKMRNKRSSGTMDSSLSNGT 295
>X96636-1|CAA65441.1| 263|Caenorhabditis elegans vab-7 protein.
Length = 263
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +2
Query: 320 DGEETSY--CFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDR 493
DG+ Y F + L + Y S + + ELA L + WF+NRR +D+
Sbjct: 81 DGQMRRYRTAFSREQIGRLEREFAKENYVSRKTRGELAAELNLPEGTIKVWFQNRRMKDK 140
Query: 494 Q 496
+
Sbjct: 141 R 141
>U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-18
protein.
Length = 261
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +2
Query: 266 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLT 445
A + R++RK RT + + KE R+ H YP + LA+ L
Sbjct: 13 AAARMRLKRKLQRNRTSFTQVQIESLEKEFERT-------H--YPDVFARERLAQKIQLP 63
Query: 446 TVQVSNWFKNRR---QRDRQAEHKDSGTGGDKQLDSST 550
++ WF NRR +R+ + +K S D L + T
Sbjct: 64 EARIQVWFSNRRAKWRREEKMRNKRSSGTMDSSLSNGT 101
>U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable
abnormal-3 protein.
Length = 455
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +2
Query: 266 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLT 445
A + R++RK RT + + KE R+ H YP + LA+ L
Sbjct: 207 AAARMRLKRKLQRNRTSFTQVQIESLEKEFERT-------H--YPDVFARERLAQKIQLP 257
Query: 446 TVQVSNWFKNRR---QRDRQAEHKDSGTGGDKQLDSST 550
++ WF NRR +R+ + +K S D L + T
Sbjct: 258 EARIQVWFSNRRAKWRREEKMRNKRSSGTMDSSLSNGT 295
>U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein.
Length = 296
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +2
Query: 266 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLT 445
A + R++RK RT + + KE R+ H YP + LA+ L
Sbjct: 48 AAARMRLKRKLQRNRTSFTQVQIESLEKEFERT-------H--YPDVFARERLAQKIQLP 98
Query: 446 TVQVSNWFKNRR---QRDRQAEHKDSGTGGDKQLDSST 550
++ WF NRR +R+ + +K S D L + T
Sbjct: 99 EARIQVWFSNRRAKWRREEKMRNKRSSGTMDSSLSNGT 136
>U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein.
Length = 284
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +2
Query: 266 AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLT 445
A + R++RK RT + + KE R+ H YP + LA+ L
Sbjct: 36 AAARMRLKRKLQRNRTSFTQVQIESLEKEFERT-------H--YPDVFARERLAQKIQLP 86
Query: 446 TVQVSNWFKNRR---QRDRQAEHKDSGTGGDKQLDSST 550
++ WF NRR +R+ + +K S D L + T
Sbjct: 87 EARIQVWFSNRRAKWRREEKMRNKRSSGTMDSSLSNGT 124
>AF016417-6|AAB65283.2| 313|Caenorhabditis elegans Hypothetical
protein F17A9.6 protein.
Length = 313
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 350 EKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQR 487
+ +S L ++ NP P E ++L T L + N+F N R+R
Sbjct: 257 QDQKSQLSIFFETNPRPDSLEMKQLGSTLNLCKSTIINYFTNMRRR 302
>Z47072-1|CAA87368.1| 252|Caenorhabditis elegans Hypothetical
protein F26C11.2 protein.
Length = 252
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTGGDKQLD 541
YP + LA L +V WF+NRR + R+ E +G+ K+ D
Sbjct: 112 YPDVFMREALAMRLDLLESRVQVWFQNRRAKWRKREQNRNGSSEIKKDD 160
>X64904-1|CAA46108.1| 184|Caenorhabditis elegans unc-4 protein.
Length = 184
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTGGDKQLD 541
YP + LA L +V WF+NRR + R+ E +G+ K+ D
Sbjct: 76 YPDVFMREALAMRLDLLESRVQVWFQNRRAKWRKREQNRNGSSEIKKDD 124
>M22363-2|AAA28159.1| 429|Caenorhabditis elegans protein (
C.elegans unc-86 geneencoding two alternative proteins,
complete cds. ).
Length = 429
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +2
Query: 302 LPRTIWDGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRR 481
LP T + TS EK L ++ P PS +A+ L V WF N+R
Sbjct: 320 LPNTDKKRKRTSIAAPEKRE--LEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQR 377
Query: 482 QRDRQ 496
Q+ ++
Sbjct: 378 QKQKR 382
>M22363-1|AAA28158.1| 467|Caenorhabditis elegans protein (
C.elegans unc-86 geneencoding two alternative proteins,
complete cds. ).
Length = 467
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +2
Query: 302 LPRTIWDGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRR 481
LP T + TS EK L ++ P PS +A+ L V WF N+R
Sbjct: 358 LPNTDKKRKRTSIAAPEKRE--LEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQR 415
Query: 482 QRDRQ 496
Q+ ++
Sbjct: 416 QKQKR 420
>L10990-6|AAB59176.1| 467|Caenorhabditis elegans Uncoordinated
protein 86, isoform b protein.
Length = 467
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +2
Query: 302 LPRTIWDGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRR 481
LP T + TS EK L ++ P PS +A+ L V WF N+R
Sbjct: 358 LPNTDKKRKRTSIAAPEKRE--LEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQR 415
Query: 482 QRDRQ 496
Q+ ++
Sbjct: 416 QKQKR 420
>L10990-5|AAB59175.1| 429|Caenorhabditis elegans Uncoordinated
protein 86, isoform a protein.
Length = 429
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +2
Query: 302 LPRTIWDGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRR 481
LP T + TS EK L ++ P PS +A+ L V WF N+R
Sbjct: 320 LPNTDKKRKRTSIAAPEKRE--LEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQR 377
Query: 482 QRDRQ 496
Q+ ++
Sbjct: 378 QKQKR 382
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 428 ETTGLTTVQVSNWFKNRRQRD--RQAEHKDSGTGGDKQLDSSTDDDSE 565
ETTG + +V F N+RQR+ QA DK +SST +E
Sbjct: 562 ETTGYSIDEVEMLFMNKRQRNIAMQARQAKLDAASDKDKNSSTSLSTE 609
>U41017-4|AAC48214.1| 278|Caenorhabditis elegans C.elegans homeobox
protein 41 protein.
Length = 278
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 326 EETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQ 496
++T F E +V+ + N P+ E ++LA L V+N+F N+R ++R+
Sbjct: 212 KKTKSPFTEHEIAVMMALFEINKSPNHEEVQKLAVQLNLGYRSVANFFMNKRAKERK 268
>Z73971-3|CAA98253.1| 265|Caenorhabditis elegans Hypothetical
protein C50H2.5 protein.
Length = 265
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 104 KAKAMVAFHRGNFKELYRLLESHNFSAHNHAKLQSLWLKAHYMEAERLRGRPLGAVG 274
K +A++ F +GN + ++ + +HA LQ L+ KA +R G+ G++G
Sbjct: 67 KTQAVLCFLKGNHFDSQEIIRRGFYDKRHHAFLQELFKKAE----KRRTGKCFGSLG 119
>Z81057-4|CAB02918.1| 559|Caenorhabditis elegans Hypothetical
protein F10D11.5 protein.
Length = 559
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 367 PPRLVSPQPVSFATRKERAGRNDRTNHSTSIELVQEPQTERQTS 498
PP +P+ S K+ G+ H T+I V++P+T + TS
Sbjct: 492 PPSPNTPRKRSIFKYKQEKGQTPE--HQTTISFVEQPETSKITS 533
>X52812-1|CAB57216.1| 66|Caenorhabditis elegans protein (
Caenorhabditis elegansceh-10 gene, unknown homeobox. ).
Length = 66
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAE 502
YP + LA T L ++ WF+NRR + R+ E
Sbjct: 31 YPDIYAREVLAGKTELQEDRIQVWFQNRRAKWRKTE 66
>U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform d protein.
Length = 664
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 349 GKVQIRPPRLVSPQPVSFATRKERAGRNDRTNHSTSIEL 465
GK PPR S PV+ R A DR H+ S+ L
Sbjct: 443 GKPPTPPPRESSASPVNSLPRGTPAHHMDRQRHNQSVPL 481
>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform a protein.
Length = 1112
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 349 GKVQIRPPRLVSPQPVSFATRKERAGRNDRTNHSTSIEL 465
GK PPR S PV+ R A DR H+ S+ L
Sbjct: 443 GKPPTPPPRESSASPVNSLPRGTPAHHMDRQRHNQSVPL 481
>U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform c protein.
Length = 949
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 349 GKVQIRPPRLVSPQPVSFATRKERAGRNDRTNHSTSIEL 465
GK PPR S PV+ R A DR H+ S+ L
Sbjct: 443 GKPPTPPPRESSASPVNSLPRGTPAHHMDRQRHNQSVPL 481
>U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical
protein C34D4.1 protein.
Length = 512
Score = 27.5 bits (58), Expect = 7.2
Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
Frame = +2
Query: 188 NHAKLQSLWLKAHYMEAERLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFK-EKSRS 364
N AKL W++ H +A+ L+ + K K + + + E+ +K E+S+S
Sbjct: 301 NSAKLYQRWVQDHDKKAKELKSKKTQQERKKSENEKTTQDQKLKEAEKNYEMWKRERSKS 360
Query: 365 V--LRDWYLHNPYPSPREKRELAETTGLTTVQVS--NWFKNRRQRDRQAEHKDSGTGGDK 532
V +R L R+K E A+ + Q + W + + + + K K
Sbjct: 361 VTDIRK-KLEQEEDKKRKKEEEAKNEKIKEAQAAFLAWKRKKEELLNEEAEKLKKEQVQK 419
Query: 533 QLDSS 547
QL+ S
Sbjct: 420 QLEES 424
>U50184-2|AAB93323.1| 344|Caenorhabditis elegans C.elegans homeobox
protein 10 protein.
Length = 344
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAE 502
YP + LA T L ++ WF+NRR + R+ E
Sbjct: 160 YPDIYAREVLAGKTELQEDRIQVWFQNRRAKWRKTE 195
>U19995-1|AAA93063.1| 344|Caenorhabditis elegans ceh-10 protein.
Length = 344
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAE 502
YP + LA T L ++ WF+NRR + R+ E
Sbjct: 160 YPDIYAREVLAGKTELQEDRIQVWFQNRRAKWRKTE 195
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans homeobox
protein 44,isoform a protein.
Length = 1273
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = +2
Query: 278 YRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAETTGLTTVQV 457
Y + K P+ RT+ T Y + LR +++ +PS +++ ++ V
Sbjct: 1097 YDLNTKKPIQRTVI----TDY-----QKDTLRFVFVNEQHPSNELCEQISLKLDMSLRTV 1147
Query: 458 SNWFKNRRQRDRQAE 502
NWF N R R + E
Sbjct: 1148 QNWFHNHRTRSKARE 1162
>U55854-5|AAA98014.1| 103|Caenorhabditis elegans Hypothetical
protein C04G6.6 protein.
Length = 103
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 470 KNRRQRDRQAEHKDSGTGGDKQLDSSTDDD 559
KN++ R+ ++E DSG D +++ S DD
Sbjct: 47 KNKKSRNSESEMSDSGKTTDCEMEISDADD 76
>U55376-2|AAA98004.1| 132|Caenorhabditis elegans C.elegans homeobox
protein 1 protein.
Length = 132
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 395 YPSPREKRELAETTGLTTVQVSNWFKNRRQRDRQAEHKDSGTGGDKQLDSSTDD 556
Y S E+ LA L+ QV WF+NRR + + +H Q S+D+
Sbjct: 25 YLSVVERLNLAIQLQLSETQVKIWFQNRRTKWK--KHNPGQDANTPQTPPSSDE 76
>U40419-5|AAA81426.1| 165|Caenorhabditis elegans Hypothetical
protein C27F2.6 protein.
Length = 165
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -3
Query: 189 LCALKLCDSSSLYSSLKFPRWKATMAFAFST 97
LC++ L SS+L+SS++ ++++ F F T
Sbjct: 28 LCSISLLSSSALFSSIENISYQSSAYFGFMT 58
>AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical
protein F54A5.1 protein.
Length = 424
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 455 VSNWFKNRRQ--RDRQAEHKDSGTGGDKQLDSST 550
VSNWF N+R+ R R AE + T SST
Sbjct: 276 VSNWFANKRKELRRRSAEASAASTSSASSSASST 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,854,279
Number of Sequences: 27780
Number of extensions: 321204
Number of successful extensions: 1214
Number of sequences better than 10.0: 168
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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