Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0790
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   3.3  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   3.3  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      23   3.3  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   3.3  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   7.6  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = -3

Query: 526 SRRSF*INFSVIRIYVLL 473
           S++SF +NF++  +Y++L
Sbjct: 109 SKKSFRMNFAIFNLYMVL 126


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 112 LSQEGCELLTAARAPPKETKQLKSS 38
           ++Q GC L   AR  P  +KQL ++
Sbjct: 212 IAQSGCALNGFARGIPDTSKQLAAA 236


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 112 LSQEGCELLTAARAPPKETKQLKSS 38
           ++Q GC L   AR  P  +KQL ++
Sbjct: 210 IAQSGCALNGFARGIPDTSKQLAAA 234


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 112 LSQEGCELLTAARAPPKETKQLKSS 38
           ++Q GC L   AR  P  +KQL ++
Sbjct: 212 IAQSGCALNGFARGIPDTSKQLAAA 236


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 501 KFIQNDLRDFEYRPSICAASRLSQHERGPC 590
           + ++  + D    PS+ A SRL + + G C
Sbjct: 139 RLVKEGICDRSTAPSVSAISRLLRGKGGEC 168


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,554
Number of Sequences: 336
Number of extensions: 3025
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)