Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0790
         (717 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007689-1|AAH07689.1|  120|Homo sapiens CRISPLD2 protein protein.     30   7.2  
AY358790-1|AAQ89150.1|  497|Homo sapiens trypsin inhibitor protein.    30   7.2  
AK027395-1|BAB55081.1|  371|Homo sapiens protein ( Homo sapiens ...    30   7.2  

>BC007689-1|AAH07689.1|  120|Homo sapiens CRISPLD2 protein protein.
          Length = 120

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -1

Query: 714 PELNPLEYKIWQ-YLEEKACSKPSSPIWSHSRTSLI 610
           P+ + +EY  W   LE+ A +  S  IW H  TSL+
Sbjct: 72  PQASNMEYMTWDDELEKSAAAWASQCIWEHGPTSLL 107


>AY358790-1|AAQ89150.1|  497|Homo sapiens trypsin inhibitor protein.
          Length = 497

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -1

Query: 714 PELNPLEYKIWQ-YLEEKACSKPSSPIWSHSRTSLI 610
           P+ + +EY  W   LE+ A +  S  IW H  TSL+
Sbjct: 72  PQASNMEYMTWDDELEKSAAAWASQCIWEHGPTSLL 107


>AK027395-1|BAB55081.1|  371|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14489 fis, clone MAMMA1002881, weakly similar to
           GLIOMA PATHOGENESIS-RELATED PROTEIN. ).
          Length = 371

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -1

Query: 714 PELNPLEYKIWQ-YLEEKACSKPSSPIWSHSRTSLI 610
           P+ + +EY  W   LE+ A +  S  IW H  TSL+
Sbjct: 72  PQASNMEYMTWDDELEKSAAAWASQCIWEHGPTSLL 107


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,709,579
Number of Sequences: 237096
Number of extensions: 1756517
Number of successful extensions: 3368
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3368
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)