Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0788
(690 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122198-1|AAM52710.1| 211|Drosophila melanogaster LD46144p pro... 92 7e-19
AE014297-492|AAN13366.1| 186|Drosophila melanogaster CG1307-PB ... 92 7e-19
AE001572-24|AAD19814.1| 176|Drosophila melanogaster hypothetica... 88 9e-18
AE014297-1609|AAF54887.2| 139|Drosophila melanogaster CG17327-P... 75 1e-13
AY118757-1|AAM50617.1| 614|Drosophila melanogaster GH08708p pro... 31 1.1
AL021106-3|CAA15937.1| 559|Drosophila melanogaster EG:63B12.5 p... 31 1.1
AE014298-272|AAN09062.1| 559|Drosophila melanogaster CG14815-PB... 31 1.1
AE014298-271|AAF45676.2| 614|Drosophila melanogaster CG14815-PA... 31 1.1
BT010078-1|AAQ22547.1| 678|Drosophila melanogaster LD09850p pro... 30 2.6
AE014134-3246|AAG22447.2| 678|Drosophila melanogaster CG2508-PA... 30 2.6
AE013599-3724|AAF47096.1| 314|Drosophila melanogaster CG13562-P... 30 3.4
>AY122198-1|AAM52710.1| 211|Drosophila melanogaster LD46144p
protein.
Length = 211
Score = 91.9 bits (218), Expect = 7e-19
Identities = 42/86 (48%), Positives = 61/86 (70%)
Frame = +2
Query: 263 NEEYKLVLVVRTDLSMGKGKIAAQCCHAAVGAFEKALKKDPEGLKAWQMTGQAKVALKID 442
N+ +K+VLVVR DL MGKGKIAAQC H AVGA+++A+ + P L++W+ G AK+A++++
Sbjct: 94 NDNFKMVLVVRNDLKMGKGKIAAQCGHGAVGAYQRAVVRTPRLLRSWENCGCAKIAVRVE 153
Query: 443 SLEEIKKIADNAKKMGLITSLIRGCG 520
S E+ I A++ L T LIR G
Sbjct: 154 SEAELMAIKKEAERQQLNTCLIRDAG 179
Score = 52.0 bits (119), Expect = 7e-07
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = +3
Query: 513 DAGRTQIAPNSITVLGVGPAPKDIIDKVTGHLKLL 617
DAGRTQI NS TVL VGPA ID+VTGHLKLL
Sbjct: 177 DAGRTQIEANSKTVLAVGPAAAADIDRVTGHLKLL 211
>AE014297-492|AAN13366.1| 186|Drosophila melanogaster CG1307-PB
protein.
Length = 186
Score = 91.9 bits (218), Expect = 7e-19
Identities = 42/86 (48%), Positives = 61/86 (70%)
Frame = +2
Query: 263 NEEYKLVLVVRTDLSMGKGKIAAQCCHAAVGAFEKALKKDPEGLKAWQMTGQAKVALKID 442
N+ +K+VLVVR DL MGKGKIAAQC H AVGA+++A+ + P L++W+ G AK+A++++
Sbjct: 69 NDNFKMVLVVRNDLKMGKGKIAAQCGHGAVGAYQRAVVRTPRLLRSWENCGCAKIAVRVE 128
Query: 443 SLEEIKKIADNAKKMGLITSLIRGCG 520
S E+ I A++ L T LIR G
Sbjct: 129 SEAELMAIKKEAERQQLNTCLIRDAG 154
Score = 52.0 bits (119), Expect = 7e-07
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = +3
Query: 513 DAGRTQIAPNSITVLGVGPAPKDIIDKVTGHLKLL 617
DAGRTQI NS TVL VGPA ID+VTGHLKLL
Sbjct: 152 DAGRTQIEANSKTVLAVGPAAAADIDRVTGHLKLL 186
>AE001572-24|AAD19814.1| 176|Drosophila melanogaster hypothetical
23.1kd-like protein protein.
Length = 176
Score = 88.2 bits (209), Expect = 9e-18
Identities = 44/99 (44%), Positives = 63/99 (63%)
Frame = +2
Query: 224 FSNASETVKKFVSNEEYKLVLVVRTDLSMGKGKIAAQCCHAAVGAFEKALKKDPEGLKAW 403
FS S ++ K+VLVVR DL MGKGKIAAQC H AVGA+++A+ + P L++W
Sbjct: 46 FSQESSVSSGSEASVSDKMVLVVRNDLKMGKGKIAAQCGHGAVGAYQRAVVRTPRLLRSW 105
Query: 404 QMTGQAKVALKIDSLEEIKKIADNAKKMGLITSLIRGCG 520
+ G AK+A++++S E+ I A++ L T LIR G
Sbjct: 106 ENCGCAKIAVRVESEAELMAIKKEAERQQLNTCLIRDAG 144
Score = 52.0 bits (119), Expect = 7e-07
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = +3
Query: 513 DAGRTQIAPNSITVLGVGPAPKDIIDKVTGHLKLL 617
DAGRTQI NS TVL VGPA ID+VTGHLKLL
Sbjct: 142 DAGRTQIEANSKTVLAVGPAAAADIDRVTGHLKLL 176
>AE014297-1609|AAF54887.2| 139|Drosophila melanogaster CG17327-PA,
isoform A protein.
Length = 139
Score = 74.5 bits (175), Expect = 1e-13
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Frame = +2
Query: 233 ASETVKKFVSN-----EEYKLVLVVRTDLSMGKGKIAAQCCHAAVGAFEKAL---KKDPE 388
+S ++KF+SN + KL LVVRTDL M KGK AAQC HAAV ++ ++ K
Sbjct: 4 SSSILQKFLSNGLAFGKSTKLALVVRTDLKMSKGKTAAQCAHAAVMCYQSSVQGTKLQNA 63
Query: 389 GLKAWQMTGQAKVALKIDSLEEIKKIADNAKKMGLITSLIRGCG 520
L+ W GQ K+ L++D+ E++ + A++ ++ +L+R G
Sbjct: 64 ILQRWCRLGQPKIVLRVDNFEQLNSLERQAQESNVVAALVRDAG 107
Score = 49.2 bits (112), Expect = 5e-06
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +3
Query: 513 DAGRTQIAPNSITVLGVGPAPKDIIDKVTGHLKLL 617
DAGRTQ+ + TVLG+GPAP + +DK+ HLKLL
Sbjct: 105 DAGRTQLESGTATVLGLGPAPAEDLDKLVAHLKLL 139
>AY118757-1|AAM50617.1| 614|Drosophila melanogaster GH08708p
protein.
Length = 614
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 290 VRTDLSMGKGKIAAQCCHAAVGAFEKALKKDPEGLKAWQMTGQAKVALKID 442
V GK ++ +AV FE A KK PE + WQ+ G ++ ++D
Sbjct: 306 VENPFEKGKEYLSKGDIPSAVLCFEVAAKKQPERAEVWQLLGTSQTENEMD 356
>AL021106-3|CAA15937.1| 559|Drosophila melanogaster EG:63B12.5
protein.
Length = 559
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 290 VRTDLSMGKGKIAAQCCHAAVGAFEKALKKDPEGLKAWQMTGQAKVALKID 442
V GK ++ +AV FE A KK PE + WQ+ G ++ ++D
Sbjct: 251 VENPFEKGKEYLSKGDIPSAVLCFEVAAKKQPERAEVWQLLGTSQTENEMD 301
>AE014298-272|AAN09062.1| 559|Drosophila melanogaster CG14815-PB,
isoform B protein.
Length = 559
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 290 VRTDLSMGKGKIAAQCCHAAVGAFEKALKKDPEGLKAWQMTGQAKVALKID 442
V GK ++ +AV FE A KK PE + WQ+ G ++ ++D
Sbjct: 251 VENPFEKGKEYLSKGDIPSAVLCFEVAAKKQPERAEVWQLLGTSQTENEMD 301
>AE014298-271|AAF45676.2| 614|Drosophila melanogaster CG14815-PA,
isoform A protein.
Length = 614
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 290 VRTDLSMGKGKIAAQCCHAAVGAFEKALKKDPEGLKAWQMTGQAKVALKID 442
V GK ++ +AV FE A KK PE + WQ+ G ++ ++D
Sbjct: 306 VENPFEKGKEYLSKGDIPSAVLCFEVAAKKQPERAEVWQLLGTSQTENEMD 356
>BT010078-1|AAQ22547.1| 678|Drosophila melanogaster LD09850p
protein.
Length = 678
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 332 QCCH-AAVGAFEKALKKDPEGLKAWQMTGQAKVALK 436
+C H A+ F++ALK +P+ L AW + G + LK
Sbjct: 331 RCDHQVAISYFQRALKLNPKYLAAWTLMGHEFMELK 366
>AE014134-3246|AAG22447.2| 678|Drosophila melanogaster CG2508-PA
protein.
Length = 678
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 332 QCCH-AAVGAFEKALKKDPEGLKAWQMTGQAKVALK 436
+C H A+ F++ALK +P+ L AW + G + LK
Sbjct: 331 RCDHQVAISYFQRALKLNPKYLAAWTLMGHEFMELK 366
>AE013599-3724|AAF47096.1| 314|Drosophila melanogaster CG13562-PA
protein.
Length = 314
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 146 MSFYTGLSCGICIGLSIFAIRKYMKMFSN 232
+S+Y G C ICI S+ A YM++++N
Sbjct: 90 LSYYRG-GCVICIDYSVVASSSYMRLYTN 117
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,061,600
Number of Sequences: 53049
Number of extensions: 565662
Number of successful extensions: 1318
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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