Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0787
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   4.6  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   6.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   6.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.0  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 726 NFGGLQDRY*ISHLCYFLLIILFPLMVIFYFD 631
           NF G   R  +  +  +LL ILF L  +F F+
Sbjct: 153 NFSGSWKRARVLVMLAWLLSILFSLPTVFLFE 184


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -3

Query: 661 FSIDGNILF*LLRHHNNQCEM 599
           F+ID  +LF +L +++  C++
Sbjct: 299 FTIDNKLLFGVLAYYSTTCDI 319


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 688 FMLFFVNYTFSIDGNILF*LLRHHN 614
           ++LFFVN+ F +   +L  L+R+ N
Sbjct: 156 YVLFFVNFAFFVVVKML--LVRYRN 178


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 688 FMLFFVNYTFSIDGNILF*LLRHHN 614
           ++LFFVN+ F +   +L  L+R+ N
Sbjct: 156 YVLFFVNFAFFVVVKML--LVRYRN 178


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 49  LRSGAAASLNGLRYTQTKRPSKIKSSK 129
           L S ++ +L+ +RY     PS++ S K
Sbjct: 41  LISNSSDALDKIRYESLTNPSRLDSGK 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,938
Number of Sequences: 336
Number of extensions: 3544
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)