Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0787
         (753 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.      27   0.82 
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    26   1.4  
DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reduct...    24   4.4  

>AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.
          Length = 94

 Score = 26.6 bits (56), Expect = 0.82
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 80  PFRLAAAPLRKQYIINMVRTATC 12
           PF++A+APL  Q    MV+T TC
Sbjct: 43  PFQMASAPLVAQSRSAMVQTLTC 65


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 687  LCYFLLIILFPLMVIFYFDYL 625
            LC FL+I LF  +++  FDYL
Sbjct: 1411 LCSFLIINLFVAVIMDNFDYL 1431


>DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reductase
           protein.
          Length = 487

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 368 YSYHQILKNANTNDIDIIHKI 306
           Y+   ILK+ + +DIDI+ K+
Sbjct: 44  YTAQYILKHLDNSDIDIVEKL 64


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,112
Number of Sequences: 2352
Number of extensions: 12864
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)