Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0787
         (753 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL645487-1|CAH72345.1| 3117|Homo sapiens centrosomal protein 350...    41   0.006
AL590632-2|CAI15177.1| 3117|Homo sapiens centrosomal protein 350...    41   0.006
AL390718-4|CAI14836.1|  581|Homo sapiens centrosomal protein 350...    41   0.006
AL390718-2|CAI14834.1| 1291|Homo sapiens centrosomal protein 350...    41   0.006
AL390718-1|CAI14833.1| 3117|Homo sapiens centrosomal protein 350...    41   0.006
AF287356-1|AAL55733.1| 3117|Homo sapiens centrosome-associated p...    41   0.006
AB007949-1|BAA32325.2| 1288|Homo sapiens KIAA0480 protein protein.     41   0.006
BC020586-1|AAH20586.1|  988|Homo sapiens SFRS14 protein protein.       32   2.5  
AF518874-1|AAN77117.1| 1082|Homo sapiens arginine/serine-rich 14...    32   2.5  
AC004447-1|AAC06129.1|  949|Homo sapiens KIAA0365 protein.             32   2.5  
AB002363-1|BAA20820.2| 1181|Homo sapiens KIAA0365 protein protein.     32   2.5  

>AL645487-1|CAH72345.1| 3117|Homo sapiens centrosomal protein 350kDa
            protein.
          Length = 3117

 Score = 40.7 bits (91), Expect = 0.006
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +3

Query: 18   RRSDHIDDILFAEWRRCEPEWTSLHTDEATVKNQIFESIFQRILTETID 164
            ++ D +D IL  E    E +W +   DE  VK Q+ + IF+ ++ +TID
Sbjct: 3054 KKRDRVDHILVQELHEEEAQWVNYDEDELCVKMQLADGIFETLIKDTID 3102


>AL590632-2|CAI15177.1| 3117|Homo sapiens centrosomal protein 350kDa
            protein.
          Length = 3117

 Score = 40.7 bits (91), Expect = 0.006
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +3

Query: 18   RRSDHIDDILFAEWRRCEPEWTSLHTDEATVKNQIFESIFQRILTETID 164
            ++ D +D IL  E    E +W +   DE  VK Q+ + IF+ ++ +TID
Sbjct: 3054 KKRDRVDHILVQELHEEEAQWVNYDEDELCVKMQLADGIFETLIKDTID 3102


>AL390718-4|CAI14836.1|  581|Homo sapiens centrosomal protein 350kDa
           protein.
          Length = 581

 Score = 40.7 bits (91), Expect = 0.006
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +3

Query: 18  RRSDHIDDILFAEWRRCEPEWTSLHTDEATVKNQIFESIFQRILTETID 164
           ++ D +D IL  E    E +W +   DE  VK Q+ + IF+ ++ +TID
Sbjct: 518 KKRDRVDHILVQELHEEEAQWVNYDEDELCVKMQLADGIFETLIKDTID 566


>AL390718-2|CAI14834.1| 1291|Homo sapiens centrosomal protein 350kDa
            protein.
          Length = 1291

 Score = 40.7 bits (91), Expect = 0.006
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +3

Query: 18   RRSDHIDDILFAEWRRCEPEWTSLHTDEATVKNQIFESIFQRILTETID 164
            ++ D +D IL  E    E +W +   DE  VK Q+ + IF+ ++ +TID
Sbjct: 1228 KKRDRVDHILVQELHEEEAQWVNYDEDELCVKMQLADGIFETLIKDTID 1276


>AL390718-1|CAI14833.1| 3117|Homo sapiens centrosomal protein 350kDa
            protein.
          Length = 3117

 Score = 40.7 bits (91), Expect = 0.006
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +3

Query: 18   RRSDHIDDILFAEWRRCEPEWTSLHTDEATVKNQIFESIFQRILTETID 164
            ++ D +D IL  E    E +W +   DE  VK Q+ + IF+ ++ +TID
Sbjct: 3054 KKRDRVDHILVQELHEEEAQWVNYDEDELCVKMQLADGIFETLIKDTID 3102


>AF287356-1|AAL55733.1| 3117|Homo sapiens centrosome-associated
            protein 350 protein.
          Length = 3117

 Score = 40.7 bits (91), Expect = 0.006
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +3

Query: 18   RRSDHIDDILFAEWRRCEPEWTSLHTDEATVKNQIFESIFQRILTETID 164
            ++ D +D IL  E    E +W +   DE  VK Q+ + IF+ ++ +TID
Sbjct: 3054 KKRDRVDHILVQELHEEEAQWVNYDEDELCVKMQLADGIFETLIKDTID 3102


>AB007949-1|BAA32325.2| 1288|Homo sapiens KIAA0480 protein protein.
          Length = 1288

 Score = 40.7 bits (91), Expect = 0.006
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +3

Query: 18   RRSDHIDDILFAEWRRCEPEWTSLHTDEATVKNQIFESIFQRILTETID 164
            ++ D +D IL  E    E +W +   DE  VK Q+ + IF+ ++ +TID
Sbjct: 1225 KKRDRVDHILVQELHEEEAQWVNYDEDELCVKMQLADGIFETLIKDTID 1273


>BC020586-1|AAH20586.1|  988|Homo sapiens SFRS14 protein protein.
          Length = 988

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +3

Query: 75  EWTSLHTDEATVK-NQIFESIFQRILTETIDEYKKTVMCDSKPDH 206
           +W   HT +  +K +Q+F+++F+ + TET  +   +  C  KP+H
Sbjct: 282 KWAGFHTIKDDIKFSQLFQTLFE-LETETCAKMLASFKCSLKPEH 325


>AF518874-1|AAN77117.1| 1082|Homo sapiens arginine/serine-rich 14
           splicing factor protein.
          Length = 1082

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +3

Query: 75  EWTSLHTDEATVK-NQIFESIFQRILTETIDEYKKTVMCDSKPDH 206
           +W   HT +  +K +Q+F+++F+ + TET  +   +  C  KP+H
Sbjct: 334 KWAGFHTIKDDIKFSQLFQTLFE-LETETCAKMLASFKCSLKPEH 377


>AC004447-1|AAC06129.1|  949|Homo sapiens KIAA0365 protein.
          Length = 949

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +3

Query: 75  EWTSLHTDEATVK-NQIFESIFQRILTETIDEYKKTVMCDSKPDH 206
           +W   HT +  +K +Q+F+++F+ + TET  +   +  C  KP+H
Sbjct: 191 KWAGFHTIKDDIKFSQLFQTLFE-LETETCAKMLASFKCSLKPEH 234


>AB002363-1|BAA20820.2| 1181|Homo sapiens KIAA0365 protein protein.
          Length = 1181

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +3

Query: 75  EWTSLHTDEATVK-NQIFESIFQRILTETIDEYKKTVMCDSKPDH 206
           +W   HT +  +K +Q+F+++F+ + TET  +   +  C  KP+H
Sbjct: 433 KWAGFHTIKDDIKFSQLFQTLFE-LETETCAKMLASFKCSLKPEH 476


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,437,947
Number of Sequences: 237096
Number of extensions: 1661985
Number of successful extensions: 3968
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3968
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)